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MS005249 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005249
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBiotin carboxyl carrier protein of acetyl-CoA carboxylase
Genome locationscaffold83:320247..320396
RNA-Seq ExpressionMS005249
SyntenyMS005249
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009317 - acetyl-CoA carboxylase complex (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003989 - acetyl-CoA carboxylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139256.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis sativus]1.4e-0573.33Show/hide
Query:  ASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        ASAS ASAVAKPPST+LP  T N+ T HS+LSFRL  KP+LRIFT
Subjt:  ASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
XP_008456465.1 PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis melo]2.0e-0776Show/hide
Query:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        MAS+ ASAS ASAVAKPPSTTLP  T N+NT HS+LSFRL  KP+LRIFT
Subjt:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
XP_008456473.1 PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis melo]2.0e-0776Show/hide
Query:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        MAS+ ASAS ASAVAKPPSTTLP  T N+NT HS+LSFRL  KP+LRIFT
Subjt:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
XP_011648731.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis sativus]1.4e-0573.33Show/hide
Query:  ASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        ASAS ASAVAKPPST+LP  T N+ T HS+LSFRL  KP+LRIFT
Subjt:  ASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
XP_022143201.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic-like, partial [Momordica charantia]5.1e-11100Show/hide
Query:  AVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        AVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
Subjt:  AVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
TrEMBL top hitse value%identityAlignment
A0A1S3C3B6 Biotin carboxyl carrier protein of acetyl-CoA carboxylase9.6e-0876Show/hide
Query:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        MAS+ ASAS ASAVAKPPSTTLP  T N+NT HS+LSFRL  KP+LRIFT
Subjt:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
A0A1S3C4K6 Biotin carboxyl carrier protein of acetyl-CoA carboxylase9.6e-0876Show/hide
Query:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        MAS+ ASAS ASAVAKPPSTTLP  T N+NT HS+LSFRL  KP+LRIFT
Subjt:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
A0A5A7VAX5 Biotin carboxyl carrier protein of acetyl-CoA carboxylase9.6e-0876Show/hide
Query:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        MAS+ ASAS ASAVAKPPSTTLP  T N+NT HS+LSFRL  KP+LRIFT
Subjt:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
A0A5D3BDP1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase9.6e-0876Show/hide
Query:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        MAS+ ASAS ASAVAKPPSTTLP  T N+NT HS+LSFRL  KP+LRIFT
Subjt:  MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
A0A6J1CPJ6 Biotin carboxyl carrier protein of acetyl-CoA carboxylase2.4e-11100Show/hide
Query:  AVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
        AVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
Subjt:  AVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGCTTCAGCTTCAGCTTCCACGGCTTCGGCGGTCGCCAAGCCTCCCTCCACTACTCTGCCTCGCGCCACCACTAACCACAACACCCCCCATTCCGCCCTCTC
CTTTCGCCTCTCCCCCAAGCCCAGACTCCGGATTTTCACC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAGCTTCAGCTTCAGCTTCCACGGCTTCGGCGGTCGCCAAGCCTCCCTCCACTACTCTGCCTCGCGCCACCACTAACCACAACACCCCCCATTCCGCCCTCTC
CTTTCGCCTCTCCCCCAAGCCCAGACTCCGGATTTTCACC
Protein sequenceShow/hide protein sequence
MASASASASTASAVAKPPSTTLPRATTNHNTPHSALSFRLSPKPRLRIFT