CuGenDBv2

Gene ID	MS005258
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	c-Myc-binding protein homolog
Genome location	scaffold83:362749..364138
RNA-Seq Expression	MS005258
Synteny	MS005258
Gene Ontology terms	GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR026060 - Associate of Myc 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0063570.1 C-Myc-binding protein-like protein [Cucumis melo var. makuwa]

7.2e-24

85.51

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS AEYEKLQSE+ADL+VKYDELL+THKETCKELEELKSSHN+ V+ST+DTTD ED+NDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

XP_004139253.1 c-Myc-binding protein homolog isoform X1 [Cucumis sativus]

1.4e-22

82.61

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS AEYEKLQSE+ADL+VKYDELL+THKETCKELEELK SHN+ V+ST+DTTD E++NDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

XP_008456430.1 PREDICTED: C-Myc-binding protein homolog [Cucumis melo]

7.2e-24

85.51

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS AEYEKLQSE+ADL+VKYDELL+THKETCKELEELKSSHN+ V+ST+DTTD ED+NDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

XP_022142948.1 C-Myc-binding protein homolog [Momordica charantia]

2.8e-28

100

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

XP_023537914.1 c-Myc-binding protein homolog [Cucurbita pepo subsp. pepo]

1.8e-22

81.16

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS+AEYEKLQSE+ADL+VKYDELL+THKETCKELE LKSSHNV  +ST+DTTD E++NDK+
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL81 Uncharacterized protein

6.6e-23

82.61

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS AEYEKLQSE+ADL+VKYDELL+THKETCKELEELK SHN+ V+ST+DTTD E++NDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

A0A1S3C377 c-Myc-binding protein homolog

3.5e-24

85.51

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS AEYEKLQSE+ADL+VKYDELL+THKETCKELEELKSSHN+ V+ST+DTTD ED+NDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

A0A5A7V8R5 c-Myc-binding protein-like protein

3.5e-24

85.51

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS AEYEKLQSE+ADL+VKYDELL+THKETCKELEELKSSHN+ V+ST+DTTD ED+NDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

A0A6J1CPJ0 c-Myc-binding protein homolog

1.4e-28

100

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

A0A6J1FDN0 c-Myc-binding protein homolog

7.3e-22

79.71

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL
        FIQQRLGGPS+AEYEKLQSE+ADL+VKYDELL+THKETCKELE LKS HNV   ST+DTTD E++NDK+
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G14045.1 unknown protein

1.0e-12

55.56

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGE
        FIQQ+LGGPSV++YEKLQ+E +DL++KY+ELL+ H+ET +EL  +KS H  + +S++D  D E
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGE

AT2G14045.2 unknown protein

1.0e-12

55.56

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGE
        FIQQ+LGGPSV++YEKLQ+E +DL++KY+ELL+ H+ET +EL  +KS H  + +S++D  D E
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGE

AT2G14045.3 unknown protein

2.1e-05

70.37

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Query:  FIQQRLGGPSVAEYEKLQSEVADLRVK
        FIQQ+LGGPSV++YEKLQ+E +DL++K
Subjt:  FIQQRLGGPSVAEYEKLQSEVADLRVK

Sequences

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CDS sequence

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TTTATTCAACAAAGACTAGGGGGTCCCTCTGTAGCTGAATATGAGAAGTTACAATCTGAGGTGGCAGATTTACGAGTCAAGTATGATGAGCTTTTATCTACGCACAAGGA
AACCTGTAAAGAGTTGGAAGAACTTAAAAGCTCGCATAATGTCGCTGTATCATCTACCAGGGATACCACTGATGGTGAGGATGATAACGATAAACTA

mRNA sequence

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Protein sequence

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FIQQRLGGPSVAEYEKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL

MS005258 (gene) of Bitter gourd (TR) v1 genome