; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005268 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005268
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGRF1-interacting factor 1
Genome locationscaffold83:450566..452467
RNA-Seq ExpressionMS005268
SyntenyMS005268
Gene Ontology termsGO:0008283 - cell population proliferation (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0048316 - seed development (biological process)
GO:0048366 - leaf development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007726 - SS18, N-terminal
IPR044779 - SS18 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651552.1 hypothetical protein Csa_019498 [Cucumis sativus]1.9e-8891.04Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS 
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        L QQQALH QLGMSSGGGIGFNMLQND +NAGGGNGGALG GGFPDFGH AA DSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

XP_004139249.1 GRF1-interacting factor 1 isoform X2 [Cucumis sativus]1.9e-8891.04Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS 
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        L QQQALH QLGMSSGGGIGFNMLQND +NAGGGNGGALG GGFPDFGH AA DSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

XP_008456296.1 PREDICTED: GRF1-interacting factor 1 [Cucumis melo]2.4e-8891.04Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS 
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        L QQQALH QLGMSSGGGIGFNMLQND  NAGGGNGGALG GGFPDFGH AA DSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

XP_022143216.1 GRF1-interacting factor 1 [Momordica charantia]5.8e-9899Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

XP_031737190.1 GRF1-interacting factor 1 isoform X1 [Cucumis sativus]1.9e-8891.96Show/hide
Query:  QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSALQ
        QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS L 
Subjt:  QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSALQ

Query:  QQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDGN
        QQQALH QLGMSSGGGIGFNMLQND +NAGGGNGGALG GGFPDFGH AA DSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDGN
Subjt:  QQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDGN

TrEMBL top hitse value%identityAlignment
A0A0A0LL92 SSXT domain-containing protein9.0e-8991.04Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS 
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        L QQQALH QLGMSSGGGIGFNMLQND +NAGGGNGGALG GGFPDFGH AA DSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

A0A1S3C305 GRF1-interacting factor 11.2e-8891.04Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS 
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        L QQQALH QLGMSSGGGIGFNMLQND  NAGGGNGGALG GGFPDFGH AA DSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

A0A5A7V8S4 GRF1-interacting factor 11.2e-8891.96Show/hide
Query:  QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSALQ
        QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS L 
Subjt:  QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSALQ

Query:  QQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDGN
        QQQALH QLGMSSGGGIGFNMLQND  NAGGGNGGALG GGFPDFGH AA DSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDGN
Subjt:  QQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDGN

A0A6J1CPL3 GRF1-interacting factor 12.8e-9899Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

A0A6J1HQC1 GRF1-interacting factor 1-like8.4e-8790.55Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGL+QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS+
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG
        L QQQALHSQLGMSSGGGIGFNMLQND +NA GGNGGALG GGFPDF H+AA DSLHR LAGGSKQDMG TGS EGRGGSSGSHGGDGGETLYLK+ADDG
Subjt:  LQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDG

Query:  N
        N
Subjt:  N

SwissProt top hitse value%identityAlignment
A5HEH4 GRF-interacting factor 12.0e-3248.11Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENK LIL I+++QN+GK  EC  +QA+LQ NLMYLAAIADSQP  +A  +QY S+ +MQPG  Y+  Q  Q M PQSLMAARSSM+Y     S 
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQALHSQLGMSSGGG-----IGFNMLQNDTSNAGGGNGGALG-----AGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGG-SSGSHGGDGG
        LQQQQA H QLGM+ GGG      GF++L  + S  GGG G   G     AG F  FG S +G            ++   + S + RGG SSG+  GD G
Subjt:  LQQQQALHSQLGMSSGGG-----IGFNMLQNDTSNAGGGNGGALG-----AGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGG-SSGSHGGDGG

Query:  ETLYLKAADDGN
        E L +   ++G+
Subjt:  ETLYLKAADDGN

Q6AVI1 GRF-interacting factor 12.5e-3552.13Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA
        + QYLDENK LIL I+++QN+GK+ ECA NQA+LQ NLMYLAAIADSQP  +A  +QY S+ +MQ G  Y+  Q AQ M PQSLMAARSSM+Y Q   S 
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSA

Query:  LQQQQ-----ALHSQLGMSSGGGI-GFNMLQNDTSNAGGGNGGALG-----AGGFPDFGHSAAGDSLHRGLAGGSKQDMGATG-SAEGRGGSSGSHGGDG
        LQQQQ     A H QLGM SGG   GF++L  + S  GGG GG  G     AG F DFG         RG  GG K+  G+T  S + RG +SG+  GDG
Subjt:  LQQQQ-----ALHSQLGMSSGGGI-GFNMLQNDTSNAGGGNGGALG-----AGGFPDFGHSAAGDSLHRGLAGGSKQDMGATG-SAEGRGGSSGSHGGDG

Query:  GETLYLKAADD
            YLK  ++
Subjt:  GETLYLKAADD

Q8L8A5 GRF1-interacting factor 12.8e-4759.45Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG----LMQPGGHYLQHQQA---QQMTPQSLMAARSSMLY
        + QYLDENKSLILKIVESQNSGKL+ECAENQARLQRNLMYLAAIADSQPQP ++H+QY S+G      + G HYLQ QQA   QQMT QSLMAARSSMLY
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG----LMQPGGHYLQHQQA---QQMTPQSLMAARSSMLY

Query:  PQQQ-----FSALQQQQALHSQLGMSS----GGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSH
         QQQ     ++ LQ QQ  HSQLGMSS    GG  G ++LQ +             AGGF DFG                K +MG+ G  EGRGGSS   
Subjt:  PQQQ-----FSALQQQQALHSQLGMSS----GGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSH

Query:  GGDGGETLYLKAADDGN
         GDGGETLYLK++DDGN
Subjt:  GGDGGETLYLKAADDGN

Q93VH6 GRF1-interacting factor 31.9e-1135.19Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP-------SAMHAQY---SSSGLMQPGGHYLQHQQA---QQMTPQSLMAA
        + +YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QPQP        AM  Q    + S +  P  +++Q  QA    Q  P  +   
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP-------SAMHAQY---SSSGLMQPGGHYLQHQQA---QQMTPQSLMAA

Query:  RSSMLY-PQQQFSALQQQQALHSQ----------LGMSSGGGIGFNMLQNDTSNAGGGNG-GALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAE
        R  + +    QF  L  QQ LH Q          +G+++  G+   M  ++T+ A    G      GG PD                    +M  +G A+
Subjt:  RSSMLY-PQQQFSALQQQQALHSQ----------LGMSSGGGIGFNMLQNDTSNAGGGNG-GALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAE

Query:  GRGGSSGSHGGDGGET
        G+GGS+  HGG   +T
Subjt:  GRGGSSGSHGGDGGET

Q9MAL9 GRF1-interacting factor 21.6e-1341.07Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMHAQYSS--SGLMQPGGHYLQHQQAQQMTPQSLMAARSS
        + +YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+ AQ ++  SG MQP  +++QH QA   +P  + A R  
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMHAQYSS--SGLMQPGGHYLQHQQAQQMTPQSLMAARSS

Query:  MLYPQQ-QFSALQQQQALHSQLGMSSGG----GIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAG
        + +    QF   QQQQ +H Q      G    G+  N +Q+       G GG +G  G    G    G
Subjt:  MLYPQQ-QFSALQQQQALHSQLGMSSGG----GIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAG

Arabidopsis top hitse value%identityAlignment
AT1G01160.1 GRF1-interacting factor 21.1e-1441.07Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMHAQYSS--SGLMQPGGHYLQHQQAQQMTPQSLMAARSS
        + +YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+ AQ ++  SG MQP  +++QH QA   +P  + A R  
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMHAQYSS--SGLMQPGGHYLQHQQAQQMTPQSLMAARSS

Query:  MLYPQQ-QFSALQQQQALHSQLGMSSGG----GIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAG
        + +    QF   QQQQ +H Q      G    G+  N +Q+       G GG +G  G    G    G
Subjt:  MLYPQQ-QFSALQQQQALHSQLGMSSGG----GIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAG

AT1G01160.2 GRF1-interacting factor 21.4e-1441.82Show/hide
Query:  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMHAQYSS--SGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLY
        YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+ AQ ++  SG MQP  +++QH QA   +P  + A R  + +
Subjt:  YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAMHAQYSS--SGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLY

Query:  PQQ-QFSALQQQQALHSQLGMSSGG----GIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAG
            QF   QQQQ +H Q      G    G+  N +Q+       G GG +G  G    G    G
Subjt:  PQQ-QFSALQQQQALHSQLGMSSGG----GIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAG

AT4G00850.1 GRF1-interacting factor 31.4e-1235.19Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP-------SAMHAQY---SSSGLMQPGGHYLQHQQA---QQMTPQSLMAA
        + +YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QPQP        AM  Q    + S +  P  +++Q  QA    Q  P  +   
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP-------SAMHAQY---SSSGLMQPGGHYLQHQQA---QQMTPQSLMAA

Query:  RSSMLY-PQQQFSALQQQQALHSQ----------LGMSSGGGIGFNMLQNDTSNAGGGNG-GALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAE
        R  + +    QF  L  QQ LH Q          +G+++  G+   M  ++T+ A    G      GG PD                    +M  +G A+
Subjt:  RSSMLY-PQQQFSALQQQQALHSQ----------LGMSSGGGIGFNMLQNDTSNAGGGNG-GALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAE

Query:  GRGGSSGSHGGDGGET
        G+GGS+  HGG   +T
Subjt:  GRGGSSGSHGGDGGET

AT5G28640.1 SSXT family protein2.0e-4859.45Show/hide
Query:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG----LMQPGGHYLQHQQA---QQMTPQSLMAARSSMLY
        + QYLDENKSLILKIVESQNSGKL+ECAENQARLQRNLMYLAAIADSQPQP ++H+QY S+G      + G HYLQ QQA   QQMT QSLMAARSSMLY
Subjt:  MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSG----LMQPGGHYLQHQQA---QQMTPQSLMAARSSMLY

Query:  PQQQ-----FSALQQQQALHSQLGMSS----GGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSH
         QQQ     ++ LQ QQ  HSQLGMSS    GG  G ++LQ +             AGGF DFG                K +MG+ G  EGRGGSS   
Subjt:  PQQQ-----FSALQQQQALHSQLGMSS----GGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSH

Query:  GGDGGETLYLKAADDGN
         GDGGETLYLK++DDGN
Subjt:  GGDGGETLYLKAADDGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAGTATCTGGATGAAAACAAGTCACTGATATTGAAGATTGTTGAGAGCCAAAATTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAA
CCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCCTAATGCAGCCAGGAGGGCATTACCTTCAGCACC
AACAAGCTCAGCAGATGACACCGCAGTCGCTGATGGCTGCCCGGTCCTCCATGTTGTACCCCCAGCAGCAGTTTTCGGCGCTGCAACAGCAGCAAGCATTGCACAGCCAA
CTCGGGATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTGCAAAACGACACCTCCAATGCAGGAGGGGGCAATGGAGGAGCACTTGGGGCAGGAGGATTTCCAGATTT
CGGACACAGCGCTGCAGGTGACAGCCTGCACCGGGGCCTAGCCGGTGGGAGCAAGCAAGATATGGGTGCAACTGGGTCTGCAGAGGGACGAGGAGGGAGCTCGGGGAGCC
ATGGCGGGGACGGCGGTGAAACTCTCTACTTGAAGGCAGCTGATGATGGGAAC
mRNA sequenceShow/hide mRNA sequence
ATGTCGCAGTATCTGGATGAAAACAAGTCACTGATATTGAAGATTGTTGAGAGCCAAAATTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAA
CCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCCTAATGCAGCCAGGAGGGCATTACCTTCAGCACC
AACAAGCTCAGCAGATGACACCGCAGTCGCTGATGGCTGCCCGGTCCTCCATGTTGTACCCCCAGCAGCAGTTTTCGGCGCTGCAACAGCAGCAAGCATTGCACAGCCAA
CTCGGGATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTGCAAAACGACACCTCCAATGCAGGAGGGGGCAATGGAGGAGCACTTGGGGCAGGAGGATTTCCAGATTT
CGGACACAGCGCTGCAGGTGACAGCCTGCACCGGGGCCTAGCCGGTGGGAGCAAGCAAGATATGGGTGCAACTGGGTCTGCAGAGGGACGAGGAGGGAGCTCGGGGAGCC
ATGGCGGGGACGGCGGTGAAACTCTCTACTTGAAGGCAGCTGATGATGGGAAC
Protein sequenceShow/hide protein sequence
MSQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQQFSALQQQQALHSQ
LGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSLHRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDGN