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MS005269 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005269
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhosphoribosylaminoimidazole carboxylase atpase-subunit isoform 1
Genome locationscaffold83:454435..454743
RNA-Seq ExpressionMS005269
SyntenyMS005269
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]6.5e-2165.42Show/hide
Query:  MASTVVKAATFSFLIVTIIFDVSAARVL----LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQ
        MA ++VK   F F+ ++ IFDVS  R L    +P+AVL RGPVPSS RNPCS IPG SRGRCTLS+VDD AA VHGG SSAFPGLN  GFAAA++ N  Q
Subjt:  MASTVVKAATFSFLIVTIIFDVSAARVL----LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQ

Query:  TQKPDSS
        TQK DSS
Subjt:  TQKPDSS

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1357Show/hide
Query:  AATFSFLIVTIIFDVSAARVLL-----PMA-VLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVA-AVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKP
        AA F F+++  IF VSAARVL      P++  + RG VP SGRNPCS IPGL RGRCTLS+V+D A     GG SSAFPG+N  GF+AAA+ N  Q Q P
Subjt:  AATFSFLIVTIIFDVSAARVLL-----PMA-VLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVA-AVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKP

KAG6599331.1 hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1561.96Show/hide
Query:  VSAARVL----------LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKPDSS
        +SAARV+          +PMA+L RG VPSS RNPCS IPG SRGRCTLS+ DD AA VHGG SSA  GLN  GFAAA++AN  +TQK D S
Subjt:  VSAARVL----------LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKPDSS

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]1.4e-1859.29Show/hide
Query:  MASTVVKAATFSFLIVTIIFDVSAARVL----------LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAA
        MA +++K   F F+ ++I+ D+SAARVL          +P A+L RGPVPSS RNPCS IPG SRGRCTLS+VD+  A V GG SSAFPGLN  GFAAA+
Subjt:  MASTVVKAATFSFLIVTIIFDVSAARVL----------LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAA

Query:  VANHYQTQKPDSS
        V N  QTQK DSS
Subjt:  VANHYQTQKPDSS

XP_021888699.1 uncharacterized protein LOC110807772 [Carica papaya]9.1e-0752.78Show/hide
Query:  LQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANH--YQTQKPDSS
        LQRGPVP SG NPC+ IPG +RGRCTLS++ DVA       ++AFP + V  F A    N    +TQK DSS
Subjt:  LQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANH--YQTQKPDSS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ84 Uncharacterized protein6.6e-1959.29Show/hide
Query:  MASTVVKAATFSFLIVTIIFDVSAARVL----------LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAA
        MA +++K   F F+ ++I+ D+SAARVL          +P A+L RGPVPSS RNPCS IPG SRGRCTLS+VD+  A V GG SSAFPGLN  GFAAA+
Subjt:  MASTVVKAATFSFLIVTIIFDVSAARVL----------LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAA

Query:  VANHYQTQKPDSS
        V N  QTQK DSS
Subjt:  VANHYQTQKPDSS

A0A1Q3BFG1 Uncharacterized protein8.3e-0651.43Show/hide
Query:  LQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKPDSS
        LQRGPV  SG NPC+ IPG   GRCT  ++D      H   S AFP   V   AA++VAN  +TQKPD+S
Subjt:  LQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKPDSS

A0A2N9F903 Uncharacterized protein7.5e-0755.38Show/hide
Query:  LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVAN
        L M  LQRGPV  SG NPC+ IPG S GRCTLS++D    V H  +  AFP  +V  FAAA++AN
Subjt:  LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVAN

A0A5A7VCY2 Uncharacterized protein3.1e-2165.42Show/hide
Query:  MASTVVKAATFSFLIVTIIFDVSAARVL----LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQ
        MA ++VK   F F+ ++ IFDVS  R L    +P+AVL RGPVPSS RNPCS IPG SRGRCTLS+VDD AA VHGG SSAFPGLN  GFAAA++ N  Q
Subjt:  MASTVVKAATFSFLIVTIIFDVSAARVL----LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQ

Query:  TQKPDSS
        TQK DSS
Subjt:  TQKPDSS

A0A5B6Z868 Uncharacterized protein1.7e-0649.33Show/hide
Query:  LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVD-DVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKPDS
        LP+  LQRGPVPSSG NPC+ IPG   GRCTL++ + + A  +   +  AFP   V  FAAA+ AN  Q +  DS
Subjt:  LPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVD-DVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKPDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTGTTGTCAAGGCCGCCACCTTTTCTTTTCTTATTGTCACTATTATTTTCGACGTGTCTGCGGCCAGGGTTTTGCTGCCCATGGCGGTGCTGCAGCGAGG
CCCCGTGCCTAGCTCCGGGAGGAATCCCTGCTCGCTTATCCCAGGCCTCAGCCGTGGCCGCTGCACGTTGAGCGATGTGGACGACGTCGCGGCCGTCGTCCATGGTGGCT
CCTCCTCTGCCTTCCCCGGCCTGAATGTTGCTGGTTTTGCTGCTGCTGCCGTGGCTAACCATTACCAGACCCAGAAGCCAGATTCGTCT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACTGTTGTCAAGGCCGCCACCTTTTCTTTTCTTATTGTCACTATTATTTTCGACGTGTCTGCGGCCAGGGTTTTGCTGCCCATGGCGGTGCTGCAGCGAGG
CCCCGTGCCTAGCTCCGGGAGGAATCCCTGCTCGCTTATCCCAGGCCTCAGCCGTGGCCGCTGCACGTTGAGCGATGTGGACGACGTCGCGGCCGTCGTCCATGGTGGCT
CCTCCTCTGCCTTCCCCGGCCTGAATGTTGCTGGTTTTGCTGCTGCTGCCGTGGCTAACCATTACCAGACCCAGAAGCCAGATTCGTCT
Protein sequenceShow/hide protein sequence
MASTVVKAATFSFLIVTIIFDVSAARVLLPMAVLQRGPVPSSGRNPCSLIPGLSRGRCTLSDVDDVAAVVHGGSSSAFPGLNVAGFAAAAVANHYQTQKPDSS