CuGenDBv2

Gene ID	MS005284
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	scaffold83:574820..575137
RNA-Seq Expression	MS005284
Synteny	MS005284
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0048038 - quinone binding (molecular function) GO:0050136 - NADH dehydrogenase (quinone) activity (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR001135 - NADH-quinone oxidoreductase, subunit D IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009236333.1 NADH-plastoquinone oxidoreductase subunit 7 [Gynostemma pentaphyllum]

4.4e-49

92.59

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG YENLEIRCFDRER P  NDF+YRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

YP_009456118.1 NADH dehydrogenase subunit 7 [Momordica charantia]

3.1e-50

94.44

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG YENLEIRCFDRERSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

YP_009674447.1 NADH dehydrogenase subunit 7 [Siraitia grosvenorii]

2.6e-49

92.59

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTES+KIIQQALEGIPGG YENLEIRCFDR RSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

YP_009752721.1 NADH dehydrogenase subunit H [Ampelosycios humblotii]

2.0e-49

93.52

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG YENLEIRCFDR RSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

YP_009752975.1 NADH dehydrogenase subunit H [Momordica sessilifolia]

3.1e-50

94.44

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG YENLEIRCFDRERSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

TrEMBL top hits

e value

%identity

Alignment

A0A2I6C035 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-50

94.44

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG YENLEIRCFDRERSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

A0A515BLN0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-49

92.59

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTES+KIIQQALEGIPGG YENLEIRCFDR RSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

A0A6C0UER3 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-49

92.59

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTES+KIIQQALEGIPGG YENLEIRCFDR RSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

A0A6H0ES80 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

9.6e-50

93.52

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG YENLEIRCFDR RSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

A0A6H0EW91 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-50

94.44

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG YENLEIRCFDRERSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

SwissProt top hits

e value

%identity

Alignment

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.2e-49

87.96

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVR+ EMTESIKIIQQALEGIPGG YENLEIRCFDR++ P  NDFDYRFISKKPSPTFEL KQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
         GFPWR +
Subjt:  GGFPWRMR

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.4e-50

89.81

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVR+GEMTESIKIIQQALEGIPGG YENLEIR FDRER+P  NDFDYRFISKKPSPTFEL KQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
         GFPWR +
Subjt:  GGFPWRMR

Q2L953 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.0e-48

85.19

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWE+QWQKEGDSLARYLVR+ EMTESIKIIQQALEGIPGG YENLEIRCFDRER P  NDF+YRFISKKPSPTFEL +QELY R+EAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
         GFPWR +
Subjt:  GGFPWRMR

Q2PMN8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.6e-49

86.11

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVR+GEM ESIKIIQQALEGIPGG YENLEIRCFDRE+ P  N+F+YRFISKKPSPTFEL KQELYVR+EAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
         GFPWR +
Subjt:  GGFPWRMR

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.9e-50

90.74

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        DWEVQWQKEGDSLARYLVRL EMTES+KIIQQALEGIPGG YENLEIR FDR RSP  NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
        GGFPWR +
Subjt:  GGFPWRMR

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

5.2e-48

83.33

Show/hide

Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ
        +WE+QWQK+GDSLARYLVRL EMTESIKIIQQALEG+PGG YENLE R FDR+R+P  NDF+YRFISKKPSPTFEL+KQELYVRVEAPKGELGIFLIG+Q
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGG-YENLEIRCFDRERSP--NDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQ

Query:  GGFPWRMR
         GFPWR +
Subjt:  GGFPWRMR

ATMG00510.1 NADH dehydrogenase subunit 7

1.6e-09

32.74

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Query:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGGYENLEIRCFDRERSPNDFDYRFISKKPS--------PTFELAKQELYVRVEAPKGELGIF
        D +V     GD   RY +R+ EM +S++II Q L  +P G     I+  DR+  P       +S + S          F +     Y  VEAPKGE G+F
Subjt:  DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGGYENLEIRCFDRERSPNDFDYRFISKKPS--------PTFELAKQELYVRVEAPKGELGIF

Query:  LIGNQGGFPWRMR
        L+ N    P+R +
Subjt:  LIGNQGGFPWRMR

Sequences

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CDS sequence

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GATTGGGAAGTTCAGTGGCAAAAAGAAGGAGATTCATTAGCTCGTTATTTAGTCAGACTTGGTGAGATGACGGAATCCATAAAAATTATTCAACAAGCTTTGGAAGGAAT
TCCAGGGGGTTATGAGAATTTAGAAATACGATGTTTTGATCGAGAAAGGTCTCCGAATGACTTTGACTATCGATTCATTAGTAAAAAACCTTCTCCAACTTTTGAGTTGG
CGAAACAAGAACTTTATGTGAGAGTCGAAGCCCCAAAAGGAGAATTGGGAATTTTTTTGATAGGGAATCAGGGTGGTTTTCCTTGGAGAATGCGT

mRNA sequence

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Protein sequence

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DWEVQWQKEGDSLARYLVRLGEMTESIKIIQQALEGIPGGYENLEIRCFDRERSPNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGNQGGFPWRMR

MS005284 (gene) of Bitter gourd (TR) v1 genome