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MS005287 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005287
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPrefoldin subunit 4
Genome locationscaffold83:592559..593744
RNA-Seq ExpressionMS005287
SyntenyMS005287
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin
IPR016661 - Prefoldin, subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139245.1 probable prefoldin subunit 4 [Cucumis sativus]1.9e-5187.8Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETN+NLEDASNELILSDD+V+RFQIGEV+AH+PKE+VE +LE+MKEENV+NLEKL++E+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

XP_008456105.1 PREDICTED: probable prefoldin subunit 4 [Cucumis melo]2.5e-5187.8Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETNDNLEDASNELILSDD+V+RFQIGEV+AH+PKE+VE +LE+MKEENV++L+KLE+E+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

XP_022142983.1 probable prefoldin subunit 4 [Momordica charantia]1.4e-5799.19Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVED+LEKMKEENVKNLEKLEKERDSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQMTELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

XP_023521156.1 probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo]1.5e-5188.62Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETNDNLEDASNELILSD++V+RF IGEV+AHVP+E+VE +LE+MKEENVKNLEKLE+E+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

XP_038890488.1 probable prefoldin subunit 4 [Benincasa hispida]1.9e-5188.62Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETNDNLEDASNELILSD++V+RF IGEV+AH+P+E+VE +LE+MKEENVKNLEKLE ERDSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

TrEMBL top hitse value%identityAlignment
A0A0A0LFH2 Prefoldin subunit 49.2e-5287.8Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETN+NLEDASNELILSDD+V+RFQIGEV+AH+PKE+VE +LE+MKEENV+NLEKL++E+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

A0A1S3C216 Prefoldin subunit 41.2e-5187.8Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETNDNLEDASNELILSDD+V+RFQIGEV+AH+PKE+VE +LE+MKEENV++L+KLE+E+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

A0A5D3D4H6 Prefoldin subunit 41.2e-5187.8Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETNDNLEDASNELILSDD+V+RFQIGEV+AH+PKE+VE +LE+MKEENV++L+KLE+E+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

A0A6J1CPL7 Prefoldin subunit 46.6e-5899.19Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVED+LEKMKEENVKNLEKLEKERDSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQMTELKKILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

A0A6J1K9X7 Prefoldin subunit 41.6e-5187.8Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIR AKETNDNLEDASNELILSD++V+RF IGEV+AHVP+E+VE +LE+MKEENVKNLEKLE+E+DSIV
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELK+ILYGKFKDSINLEDD
Subjt:  AQMTELKKILYGKFKDSINLEDD

SwissProt top hitse value%identityAlignment
Q2TBR6 Prefoldin subunit 45.1e-1540.68Show/hide
Query:  VTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDE--VVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQMTE
        VT+EDQQ INKF+R  +R  EL++EI + K+   NLEDA  +++L+DD+  ++ +QIG+V+    +E+ ++ LE+ K+   + ++ LE   +SI   + +
Subjt:  VTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDE--VVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQMTE

Query:  LKKILYGKFKDSINLEDD
        LK  LY KF  +INLE D
Subjt:  LKKILYGKFKDSINLEDD

Q54TB7 Probable prefoldin subunit 42.1e-1339.5Show/hide
Query:  ESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDE-VVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQM
        E+EV   DQ+ IN F RLNNR HEL  E +  +E  +   D+ ++L ++DD+   ++ +GE +  V KED E  +EK   +  ++++K++ + + I  + 
Subjt:  ESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDE-VVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQM

Query:  TELKKILYGKFKDSINLED
         ELK ILY KFK+SINLE+
Subjt:  TELKKILYGKFKDSINLED

Q9M4B5 Probable prefoldin subunit 48.3e-4271.9Show/hide
Query:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQ
        GSE EVTWEDQQNIN FSRLNNR H+L+D+I+ AKE  +NLEDA NELIL+D+E+VRFQIGEV+AHVP++DVE K+E+MKE   K+LEKLE+E++SIV Q
Subjt:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQ

Query:  MTELKKILYGKFKDSINLEDD
        M  LKK+LY KFKDSINLE+D
Subjt:  MTELKKILYGKFKDSINLEDD

Q9M4C4 Probable prefoldin subunit 43.6e-4573.98Show/hide
Query:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV
        G G+E++VTWEDQQNIN+F RLNNRFHEL DEIRLAKE N+NLEDA NELIL D++VVRFQIGEV+AH+P +DVE +LE+MKE+  K LE+LE+E++SI+
Subjt:  GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIV

Query:  AQMTELKKILYGKFKDSINLEDD
        AQM ELKKILYGKFKD+INLE+D
Subjt:  AQMTELKKILYGKFKDSINLEDD

Q9NQP4 Prefoldin subunit 43.9e-1540.68Show/hide
Query:  VTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDE--VVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQMTE
        VT+EDQQ INKF+R  +R  EL++EI + K+   NLEDA ++++L+DD+  ++ +QIG+V+    +E+ ++ LE+ K+   + ++ LE   +SI   + +
Subjt:  VTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDE--VVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQMTE

Query:  LKKILYGKFKDSINLEDD
        LK  LY KF  +INLE D
Subjt:  LKKILYGKFKDSINLEDD

Arabidopsis top hitse value%identityAlignment
AT1G08780.1 ABI3-interacting protein 35.9e-4371.9Show/hide
Query:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQ
        GSE EVTWEDQQNIN FSRLNNR H+L+D+I+ AKE  +NLEDA NELIL+D+E+VRFQIGEV+AHVP++DVE K+E+MKE   K+LEKLE+E++SIV Q
Subjt:  GSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQ

Query:  MTELKKILYGKFKDSINLEDD
        M  LKK+LY KFKDSINLE+D
Subjt:  MTELKKILYGKFKDSINLEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCGGAGGATCTGAATCGGAGGTCACTTGGGAGGACCAACAGAATATTAACAAATTTAGTAGGTTGAACAATCGCTTCCACGAGCTTGAGGATGAGATTAGACTCGCCAA
GGAAACAAATGATAACCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGACGAGGTGGTTCGTTTCCAAATTGGGGAAGTTTATGCACATGTGCCAAAGGAAGACG
TGGAAGACAAGCTGGAAAAAATGAAAGAAGAGAATGTCAAGAACTTGGAGAAACTTGAGAAAGAAAGGGATTCTATTGTGGCCCAGATGACTGAGTTGAAGAAAATTCTG
TACGGGAAATTCAAAGACTCCATCAATCTAGAAGATGAT
mRNA sequenceShow/hide mRNA sequence
GGCGGAGGATCTGAATCGGAGGTCACTTGGGAGGACCAACAGAATATTAACAAATTTAGTAGGTTGAACAATCGCTTCCACGAGCTTGAGGATGAGATTAGACTCGCCAA
GGAAACAAATGATAACCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGACGAGGTGGTTCGTTTCCAAATTGGGGAAGTTTATGCACATGTGCCAAAGGAAGACG
TGGAAGACAAGCTGGAAAAAATGAAAGAAGAGAATGTCAAGAACTTGGAGAAACTTGAGAAAGAAAGGGATTCTATTGTGGCCCAGATGACTGAGTTGAAGAAAATTCTG
TACGGGAAATTCAAAGACTCCATCAATCTAGAAGATGAT
Protein sequenceShow/hide protein sequence
GGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRLAKETNDNLEDASNELILSDDEVVRFQIGEVYAHVPKEDVEDKLEKMKEENVKNLEKLEKERDSIVAQMTELKKIL
YGKFKDSINLEDD