; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005291 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005291
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationscaffold83:610067..610600
RNA-Seq ExpressionMS005291
SyntenyMS005291
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]1.3e-6485.21Show/hide
Query:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV
        ME+G I+++LVL L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET AS IV
Subjt:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV

Query:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        RIVDQCANGGLDLDVNVF  IDTNGNG+ RGH+ VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

XP_022143159.1 pathogenesis-related protein PR-4-like [Momordica charantia]4.6e-78100Show/hide
Query:  MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVR
        MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVR
Subjt:  MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVR

Query:  IVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        IVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
Subjt:  IVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]1.1e-6383.8Show/hide
Query:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV
        ME+G  L++L L L +L +ANAQSA NVRATYHLYNPQ+INWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET AS IV
Subjt:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV

Query:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        RIVDQCANGGLDLDVNVF  IDTNGNG  RGH+ VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

XP_023521169.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo]2.2e-6483.8Show/hide
Query:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV
        M++G  L++L L L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPLE+RRRYGWTAFCGPVGPRGQASCGRCLRVTNTET+AS IV
Subjt:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV

Query:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        RIVDQC+NGGLDLDVNVF  IDTNGNG+ RGH+ VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]4.5e-6584.51Show/hide
Query:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV
        ME+G I+++LVL L +L +ANAQSA NVRATYHLYNPQNINWDYLRASV+CATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTET AS IV
Subjt:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV

Query:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        RIVDQC+NGGLDLDVNVF  +DTNGNG+ RGH+ VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

TrEMBL top hitse value%identityAlignment
A0A1S3C3H6 pathogenesis-related protein PR-4-like6.4e-6585.21Show/hide
Query:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV
        ME+G I+++LVL L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET AS IV
Subjt:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV

Query:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        RIVDQCANGGLDLDVNVF  IDTNGNG+ RGH+ VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like6.4e-6585.21Show/hide
Query:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV
        ME+G I+++LVL L +L +ANAQSATNVRATYHLYNPQ+INWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET AS IV
Subjt:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV

Query:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        RIVDQCANGGLDLDVNVF  IDTNGNG+ RGH+ VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

A0A6J1CNH9 pathogenesis-related protein PR-4-like2.2e-78100Show/hide
Query:  MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVR
        MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVR
Subjt:  MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVR

Query:  IVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        IVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
Subjt:  IVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like1.6e-6385.4Show/hide
Query:  ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQ
        IL++L L L +L +ANAQSA NVRATYHLYNPQ+INWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET AS IVRIVDQ
Subjt:  ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQ

Query:  CANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        CANGGLDLDVNVF  IDTNGNG  RGH+ VNYQFVNC
Subjt:  CANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like5.4e-6483.8Show/hide
Query:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV
        ME+G  L++L L L +L +ANAQSA NVRATYHLYNPQ+INWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET AS IV
Subjt:  MERG-ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIV

Query:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        RIVDQCANGGLDLDVNVF  IDTNGNG  RGH+ VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN13.5e-5273.11Show/hide
Query:  SATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDT
        SA NVRATYH+YNPQN+ WD    S +C+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQC+NGGLDLDVNVF  IDT
Subjt:  SATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDT

Query:  NGNGHARGHMFVNYQFVNC
        +GNG+ +GH+ VNYQFV+C
Subjt:  NGNGHARGHMFVNYQFVNC

P09762 Wound-induced protein WIN21.1e-5071.43Show/hide
Query:  SATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDT
        SA NVRATYH+YNPQN+ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQC+NGGLDLD+NVF  IDT
Subjt:  SATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSIDT

Query:  NGNGHARGHMFVNYQFVNC
        +G G+ +GH+ VNYQFVNC
Subjt:  NGNGHARGHMFVNYQFVNC

P29062 Pathogenesis-related protein PR-4A2.6e-5570.8Show/hide
Query:  ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQ
        + V L++   ++ +A AQSATNVR+TYHLYNPQNINWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT T     VRIVDQ
Subjt:  ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQ

Query:  CANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        C+NGGLDLDVNVFN +DTNG G+ +GH+ VNY+FVNC
Subjt:  CANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

P29063 Pathogenesis-related protein PR-4B3.0e-5671.53Show/hide
Query:  ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQ
        + V L++   ++ +A AQSATNVR+TYHLYNPQNINWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT T   A VRIVDQ
Subjt:  ILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQ

Query:  CANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC
        C+NGGLDLDVNVFN +DTNG G+ +GH+ VNY+FVNC
Subjt:  CANGGLDLDVNVFNSIDTNGNGHARGHMFVNYQFVNC

P32045 Pathogenesis-related protein P24.7e-5778.74Show/hide
Query:  LLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDV
        ++ VA AQSATNVRATYHLYNPQNINWD   ASV+CATWDA+KPLEWRRRYGWTAFCGP GP GQASCGRCLRVTNT T     VRIVDQC NGGLDLDV
Subjt:  LLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDV

Query:  NVFNSIDTNGNGHARGHMFVNYQFVNC
        NVFN +DTNG G+ RG++ VNY+FVNC
Subjt:  NVFNSIDTNGNGHARGHMFVNYQFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 44.8e-4967.5Show/hide
Query:  QSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSID
        +SA+NVRATYH YNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +FN ID
Subjt:  QSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGLDLDVNVFNSID

Query:  TNGNGHARGHMFVNYQFVNC
        T+G G+ +GH+ V+YQFV+C
Subjt:  TNGNGHARGHMFVNYQFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAATTTTGGTGATGTTGGTTTTGGGTTTGTGCCTTTTGGGTGTGGCCAATGCCCAAAGTGCCACAAATGTTAGGGCTACATATCACTTGTACAACCCACA
AAACATCAATTGGGATTATCTTAGGGCAAGTGTCTTCTGTGCCACATGGGATGCCAACAAGCCCTTGGAGTGGCGCCGCCGTTACGGCTGGACCGCCTTTTGTGGCCCTG
TCGGCCCTCGTGGCCAAGCTTCCTGCGGTCGCTGCTTGAGGGTGACCAACACTGAAACTAGAGCTTCAGCAATAGTAAGGATTGTGGATCAATGTGCCAATGGAGGATTA
GATTTGGATGTGAATGTTTTTAATAGCATTGACACCAATGGAAATGGACATGCTCGTGGCCATATGTTTGTCAATTACCAGTTTGTCAATTGC
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGGAATTTTGGTGATGTTGGTTTTGGGTTTGTGCCTTTTGGGTGTGGCCAATGCCCAAAGTGCCACAAATGTTAGGGCTACATATCACTTGTACAACCCACA
AAACATCAATTGGGATTATCTTAGGGCAAGTGTCTTCTGTGCCACATGGGATGCCAACAAGCCCTTGGAGTGGCGCCGCCGTTACGGCTGGACCGCCTTTTGTGGCCCTG
TCGGCCCTCGTGGCCAAGCTTCCTGCGGTCGCTGCTTGAGGGTGACCAACACTGAAACTAGAGCTTCAGCAATAGTAAGGATTGTGGATCAATGTGCCAATGGAGGATTA
GATTTGGATGTGAATGTTTTTAATAGCATTGACACCAATGGAAATGGACATGCTCGTGGCCATATGTTTGTCAATTACCAGTTTGTCAATTGC
Protein sequenceShow/hide protein sequence
MERGILVMLVLGLCLLGVANAQSATNVRATYHLYNPQNINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASAIVRIVDQCANGGL
DLDVNVFNSIDTNGNGHARGHMFVNYQFVNC