; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005305 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005305
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPITH domain-containing protein
Genome locationscaffold83:757030..759957
RNA-Seq ExpressionMS005305
SyntenyMS005305
Gene Ontology termsNA
InterPro domainsIPR008979 - Galactose-binding-like domain superfamily
IPR010400 - PITH domain
IPR037047 - PITH domain superfamily
IPR045099 - PITH domain-containing protein 1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455826.1 PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo]2.2e-7694.67Show/hide
Query:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI
        NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTI
Subjt:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI

Query:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        V SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSG DTTK+QKIALYGTT
Subjt:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

XP_022142973.1 PITH domain-containing protein At3g04780 [Momordica charantia]2.2e-7997.44Show/hide
Query:  TVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDF
        T +H  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDF
Subjt:  TVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDF

Query:  PPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        PPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
Subjt:  PPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

XP_022937687.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata]2.9e-7691.14Show/hide
Query:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN
        S T +H  NQVDLSDFINWSG+ECLNQNFSH+ TNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVN
Subjt:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN

Query:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        D+PPSDTIV SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
Subjt:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

XP_022946891.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata]5.9e-7793.04Show/hide
Query:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN
        S T +H  NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVN
Subjt:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN

Query:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        D+PPSDTIV SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTT
Subjt:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

XP_038891254.1 PITH domain-containing protein At3g04780 [Benincasa hispida]5.9e-7796Show/hide
Query:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI
        NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTI
Subjt:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI

Query:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        V SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKIALYGTT
Subjt:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

TrEMBL top hitse value%identityAlignment
A0A1S3C1X8 PITH domain-containing protein At3g047801.1e-7694.67Show/hide
Query:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI
        NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTI
Subjt:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI

Query:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        V SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSG DTTK+QKIALYGTT
Subjt:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

A0A5D3D4D2 PITH domain-containing protein1.1e-7694.67Show/hide
Query:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI
        NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVND+PPSDTI
Subjt:  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTI

Query:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        V SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSG DTTK+QKIALYGTT
Subjt:  VFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

A0A6J1CPL1 PITH domain-containing protein At3g047801.0e-7997.44Show/hide
Query:  TVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDF
        T +H  NQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDF
Subjt:  TVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDF

Query:  PPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        PPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
Subjt:  PPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

A0A6J1G4V6 PITH domain-containing protein At3g04780-like2.8e-7793.04Show/hide
Query:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN
        S T +H  NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVN
Subjt:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN

Query:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        D+PPSDTIV SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTT
Subjt:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

A0A6J1KJE4 PITH domain-containing protein At3g04780-like2.8e-7793.04Show/hide
Query:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN
        S T +H  NQVDLSDFINWSGVECLNQNFSH+ TNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHS+VIKGPEEEGPRTVKLFSNKENMGFGNVN
Subjt:  SHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVN

Query:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
        D+PPSDTIV SPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTT
Subjt:  DFPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

SwissProt top hitse value%identityAlignment
O43396 Thioredoxin-like protein 18.6e-2340Show/hide
Query:  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTI
        +DL  FIN +G ECLN++  H   N     C   D+  LESD DEQLLI + FNQ +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  +
Subjt:  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTI

Query:  VFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGT
          + D++     V ++YVKFQNV S+TIF++ NQ   +TT++      GT
Subjt:  VFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGT

Q8CDN6 Thioredoxin-like protein 13.3e-2239.33Show/hide
Query:  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTI
        +DL  FIN +G ECLN++  H   N     C   D   LESD DEQLLI + FNQ +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  +
Subjt:  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTI

Query:  VFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGT
          + D++     V ++YVKFQNV S+T+F++ NQ   +TT++      GT
Subjt:  VFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGT

Q920J4 Thioredoxin-like protein 14.3e-2239.33Show/hide
Query:  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTI
        +DL  FIN +G ECLN++  H   N     C   D   LESD DEQLLI + FNQ +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  +
Subjt:  VDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDFPPSDTI

Query:  VFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGT
          + D++     V ++YVKFQNV S+T+F++ NQ   +TT++      GT
Subjt:  VFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGT

Q9SQZ9 PITH domain-containing protein At3g047805.2e-6077.18Show/hide
Query:  QVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIV
        QVDL DFI+WSGVECLNQ+ SHSL NAL Q  R+++ L LESDADEQLLIYIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F NVNDFPPSDT  
Subjt:  QVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIV

Query:  FSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
         + +NL GKP V+KYVKFQNVRSLTIFIE NQSG++ TKVQKIALYG+T
Subjt:  FSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT

Q9USR1 Thioredoxin-like protein 17.3e-2241.67Show/hide
Query:  VECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVI---KGPEEEGPRTVKLFSNK-ENMGFGNVNDFPPS---DTIVFSPDN
        +ECLNQ   H L +A N     N S  LESD DEQL+IYIPF +V+K+HS+ I   KG     P+T+KL+ N+  N+ F +   F P+   + IV+  D+
Subjt:  VECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVI---KGPEEEGPRTVKLFSNK-ENMGFGNVNDFPPS---DTIVFSPDN

Query:  LTGKPEVV--KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYG
           +P ++  ++VKFQ V SL IFI  N    +TTK+ ++ L+G
Subjt:  LTGKPEVV--KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYG

Arabidopsis top hitse value%identityAlignment
AT2G25950.1 Protein of unknown function (DUF1000)1.0e-1028.39Show/hide
Query:  LYNQVDLSDFINWSGVECLNQNFS---HSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSV-VIKGPEEEGPRTVKLFSNKENMGFGNVNDF
        LY  +DLS       V  LN++ S    S+  A  Q    +   L  ++ D +LL+++PF   +K+ S+ ++ GPE   P  +++F N+E + F +    
Subjt:  LYNQVDLSDFINWSGVECLNQNFS---HSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSV-VIKGPEEEGPRTVKLFSNKENMGFGNVNDF

Query:  PPSDTIVFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYG
                + +NL G  E   +Y KFQ+V ++T+   ++  G DTT+++ I   G
Subjt:  PPSDTIVFSPDNLTGKPEV-VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYG

AT3G04780.1 Protein of unknown function (DUF1000)3.7e-6177.18Show/hide
Query:  QVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIV
        QVDL DFI+WSGVECLNQ+ SHSL NAL Q  R+++ L LESDADEQLLIYIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F NVNDFPPSDT  
Subjt:  QVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDTIV

Query:  FSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT
         + +NL GKP V+KYVKFQNVRSLTIFIE NQSG++ TKVQKIALYG+T
Subjt:  FSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCAGAGATTCTCATACTGTGCTTCACTTATATAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACTCTCTTAC
TAATGCTCTTAATCAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCCGATGAGCAACTTCTGATATACATACCATTTAACCAAGTCATTAAATTGCATT
CCGTGGTCATTAAAGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTTCCCTCCCAGTGACACA
ATTGTGTTTTCACCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTTAAATTTCAAAATGTCCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGGGC
TGACACTACGAAAGTTCAAAAGATTGCCCTGTATGGAACAACG
mRNA sequenceShow/hide mRNA sequence
ATCAGAGATTCTCATACTGTGCTTCACTTATATAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACTCTCTTAC
TAATGCTCTTAATCAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCCGATGAGCAACTTCTGATATACATACCATTTAACCAAGTCATTAAATTGCATT
CCGTGGTCATTAAAGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTTCCCTCCCAGTGACACA
ATTGTGTTTTCACCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTTAAATTTCAAAATGTCCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGGGC
TGACACTACGAAAGTTCAAAAGATTGCCCTGTATGGAACAACG
Protein sequenceShow/hide protein sequence
IRDSHTVLHLYNQVDLSDFINWSGVECLNQNFSHSLTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSVVIKGPEEEGPRTVKLFSNKENMGFGNVNDFPPSDT
IVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTT