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MS005321 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005321
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCWF19-like protein 2 homolog isoform X1
Genome locationscaffold201:67023..67517
RNA-Seq ExpressionMS005321
SyntenyMS005321
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599007.1 CWF19-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]8.5e-2343.24Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTD--------------------------------------------------
        NEKQKSK K T YSSS     D+EYQNTK KKFGRKK  SSKDYSTSSTD                                                  
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTD--------------------------------------------------

Query:  -----------SGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRTFRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQ
                   S S+EK+ K  R+GER R +KRKSR+  LGE+MF                           D I+ETSSK DKEIVRKEMGL+WMLKPQ
Subjt:  -----------SGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRTFRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQ

Query:  ESMHRSSNESIDSQQYEAPTEV
        E+M R S+ESID+QQ EAP E+
Subjt:  ESMHRSSNESIDSQQYEAPTEV

XP_022158358.1 CWF19-like protein 2 homolog isoform X1 [Momordica charantia]2.9e-5579.5Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRT
        NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCI                      
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRT

Query:  FRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV
                  LDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTE+
Subjt:  FRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV

XP_022946473.1 CWF19-like protein 2 isoform X2 [Cucurbita moschata]2.6e-2446.6Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTD---------------------------------------------SGSIE
        NEKQKSK K T YSSS     D+EYQNTK KKFGRKK  SSKDYSTSSTD                                             S S+E
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTD---------------------------------------------SGSIE

Query:  KQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRTFRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQY
        K  K  R+GER R +KRKSR+  LGE+MF                           D I+ETSSK DKEIVRKEMGL+WMLKPQE+M R S+ESID+QQ 
Subjt:  KQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRTFRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQY

Query:  EAPTEV
        EAP E+
Subjt:  EAPTEV

XP_022998984.1 LOW QUALITY PROTEIN: CWF19-like protein 2 [Cucurbita maxima]6.5e-2351.96Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKS---RNCILGE-----KMFDMYLILFH
        NEKQKSK K T YSSS     D+EYQNTK KKFGRKK  SSKDYSTSSTDS   E   ++ +K   R+A KRKS   RN +  E        D       
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKS---RNCILGE-----KMFDMYLILFH

Query:  CHVSYFRTFRGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV
            + R  +G +N            E  D I+ETSSK DKEIVRKEMGL+WMLKPQE+M R S+ESID+QQ EAP E+
Subjt:  CHVSYFRTFRGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV

XP_023520586.1 CWF19-like protein 2 [Cucurbita pepo subsp. pepo]5.5e-2246.63Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNC--------ILGEKMFDMYLILFH
        NEKQKSK K T YSSS     D+EYQNTK KKFGRKK  SSKDYSTSSTDS   E   ++ +K   R+A KR   N         + G+   D   +   
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNC--------ILGEKMFDMYLILFH

Query:  CHVS--------------YFRTFRGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV
           S                   +G +N            E  D I+ETSSK DKEIVRKEMGL+WMLKPQE+M R S+ESID+QQ EAP E+
Subjt:  CHVS--------------YFRTFRGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV

TrEMBL top hitse value%identityAlignment
A0A6J1DVM0 CWF19-like protein 2 homolog isoform X28.9e-1897.96Show/hide
Query:  DIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV
        DIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTE+
Subjt:  DIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV

A0A6J1DZ64 CWF19-like protein 2 homolog isoform X11.4e-5579.5Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRT
        NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCI                      
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRT

Query:  FRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV
                  LDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTE+
Subjt:  FRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV

A0A6J1G3U6 CWF19-like protein 2 isoform X11.7e-2146.11Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRT
        NEKQKSK K T YSSS     D+EYQNTK KKFGRKK  SSKDYSTSSTDS   E   ++ +K   R+A KR   N    E    +     +   +  R 
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRT

Query:  F----------------------RGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV
        +                      +G +N            E  D I+ETSSK DKEIVRKEMGL+WMLKPQE+M R S+ESID+QQ EAP E+
Subjt:  F----------------------RGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV

A0A6J1G3Y6 CWF19-like protein 2 isoform X21.3e-2446.6Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTD---------------------------------------------SGSIE
        NEKQKSK K T YSSS     D+EYQNTK KKFGRKK  SSKDYSTSSTD                                             S S+E
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTD---------------------------------------------SGSIE

Query:  KQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRTFRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQY
        K  K  R+GER R +KRKSR+  LGE+MF                           D I+ETSSK DKEIVRKEMGL+WMLKPQE+M R S+ESID+QQ 
Subjt:  KQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRTFRGFQNFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQY

Query:  EAPTEV
        EAP E+
Subjt:  EAPTEV

A0A6J1KFU1 LOW QUALITY PROTEIN: CWF19-like protein 23.2e-2351.96Show/hide
Query:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKS---RNCILGE-----KMFDMYLILFH
        NEKQKSK K T YSSS     D+EYQNTK KKFGRKK  SSKDYSTSSTDS   E   ++ +K   R+A KRKS   RN +  E        D       
Subjt:  NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKS---RNCILGE-----KMFDMYLILFH

Query:  CHVSYFRTFRGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV
            + R  +G +N            E  D I+ETSSK DKEIVRKEMGL+WMLKPQE+M R S+ESID+QQ EAP E+
Subjt:  CHVSYFRTFRGFQN----------FFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGAGAAACAAAAAAGTAAGAGAAAGATGACTTGTTACAGTAGTTCAGATGATGACGATGACGATGACGAGTATCAAAATACAAAAAATAAGAAGTTTGGGAGG
AAGAAACGGGACTCGTCAAAGGATTATTCAACATCCTCAACAGATAGTGGCAGCATTGAAAAGCAACCAAAAGAGAGTAGAAAAGGTGAAAGAAGACGGGCGAGG
AAAAGAAAGAGTCGAAATTGCATCCTTGGTGAGAAAATGTTCGATATGTATCTCATTCTCTTTCATTGTCATGTTTCATATTTTAGAACATTTCGGGGATTTCAA
AATTTCTTTGAATTTTTAGATGACATCAAAGAAACTTCTTCCAAAGGTGACAAGGAAATTGTTAGAAAAGAAATGGGGTTGGATTGGATGCTTAAACCCCAAGAA
AGTATGCATAGAAGCTCAAATGAATCTATTGATAGTCAACAATATGAAGCTCCTACGGAAGTATGCTCCTGTCTT
mRNA sequenceShow/hide mRNA sequence
AATGAGAAACAAAAAAGTAAGAGAAAGATGACTTGTTACAGTAGTTCAGATGATGACGATGACGATGACGAGTATCAAAATACAAAAAATAAGAAGTTTGGGAGG
AAGAAACGGGACTCGTCAAAGGATTATTCAACATCCTCAACAGATAGTGGCAGCATTGAAAAGCAACCAAAAGAGAGTAGAAAAGGTGAAAGAAGACGGGCGAGG
AAAAGAAAGAGTCGAAATTGCATCCTTGGTGAGAAAATGTTCGATATGTATCTCATTCTCTTTCATTGTCATGTTTCATATTTTAGAACATTTCGGGGATTTCAA
AATTTCTTTGAATTTTTAGATGACATCAAAGAAACTTCTTCCAAAGGTGACAAGGAAATTGTTAGAAAAGAAATGGGGTTGGATTGGATGCTTAAACCCCAAGAA
AGTATGCATAGAAGCTCAAATGAATCTATTGATAGTCAACAATATGAAGCTCCTACGGAAGTATGCTCCTGTCTT
Protein sequenceShow/hide protein sequence
NEKQKSKRKMTCYSSSDDDDDDDEYQNTKNKKFGRKKRDSSKDYSTSSTDSGSIEKQPKESRKGERRRARKRKSRNCILGEKMFDMYLILFHCHVSYFRTFRGFQ
NFFEFLDDIKETSSKGDKEIVRKEMGLDWMLKPQESMHRSSNESIDSQQYEAPTEVCSCL