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MS005330 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005330
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon protein, putative, CACTA, En/Spm sub-class
Genome locationscaffold201:307508..307663
RNA-Seq ExpressionMS005330
SyntenyMS005330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143616.1 uncharacterized protein LOC111013476 [Momordica charantia]3.0e-0653.85Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        Y LYEI TR+KDYR +L+R+Y+   D   ARQ+PY  I  E WN+LCD+ E+
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

XP_022148911.1 uncharacterized protein LOC111017461 [Momordica charantia]3.0e-0653.85Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        Y LYEI TR+KDYR +L+R+Y+   D   ARQ+PY  I  E WN+LCD+ E+
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

XP_022153681.1 uncharacterized protein LOC111021138 [Momordica charantia]7.9e-0758.82Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWE
        Y LYEI TR+KDYR +LHR+Y+   D   ARQ+PY  I  E WN+LCDR E
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWE

XP_022159083.1 uncharacterized protein LOC111025525 [Momordica charantia]6.4e-0959.62Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        Y LYEI TR+KDYR +LHR+Y+   D   ARQ+PY  I  E WN+LCDRWE+
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

XP_038895321.1 uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]2.5e-0548.08Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        Y  YEI  R+KDYR  L+++Y+ + D   AR+ PY   T + WN+LCDRWE+
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

TrEMBL top hitse value%identityAlignment
A0A5A7US78 Uncharacterized protein6.1e-0545.83Show/hide
Query:  EIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        +++  ++++R  LH+YY  F+D+  AR  P  +IT E WNM+CDRWET
Subjt:  EIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

A0A6J1CQT5 uncharacterized protein LOC1110134761.4e-0653.85Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        Y LYEI TR+KDYR +L+R+Y+   D   ARQ+PY  I  E WN+LCD+ E+
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

A0A6J1D6S9 uncharacterized protein LOC1110174611.4e-0653.85Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        Y LYEI TR+KDYR +L+R+Y+   D   ARQ+PY  I  E WN+LCD+ E+
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

A0A6J1DLF1 uncharacterized protein LOC1110211383.8e-0758.82Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWE
        Y LYEI TR+KDYR +LHR+Y+   D   ARQ+PY  I  E WN+LCDR E
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWE

A0A6J1DXU5 uncharacterized protein LOC1110255253.1e-0959.62Show/hide
Query:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET
        Y LYEI TR+KDYR +LHR+Y+   D   ARQ+PY  I  E WN+LCDRWE+
Subjt:  YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACAGATTATACGAGATCAAGACCCGCTACAAAGATTATCGACACCGCTTACATAGGTACTATCGTAATTTCGAAGATGCTGAAACGGCTCGACAACGACCCTAT
GGACAAATTACACCAGAAGTTTGGAATATGTTGTGTGATAGATGGGAAACT
mRNA sequenceShow/hide mRNA sequence
TACAGATTATACGAGATCAAGACCCGCTACAAAGATTATCGACACCGCTTACATAGGTACTATCGTAATTTCGAAGATGCTGAAACGGCTCGACAACGACCCTAT
GGACAAATTACACCAGAAGTTTGGAATATGTTGTGTGATAGATGGGAAACT
Protein sequenceShow/hide protein sequence
YRLYEIKTRYKDYRHRLHRYYRNFEDAETARQRPYGQITPEVWNMLCDRWET