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MS005347 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005347
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationscaffold6:134935..135102
RNA-Seq ExpressionMS005347
SyntenyMS005347
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJU03805.1 ribosomal protein S7 [Magnolia kachirachirai]3.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

QUV73719.1 ribosomal protein S7 [Rohdea wattii]3.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

XP_038718553.1 30S ribosomal protein S7, chloroplastic [Tripterygium wilfordii]3.9e-2096.36Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGASQKRPGRNMAFK SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

YP_009767874.1 ribosomal protein S7 [Dermatophyllum secundiflorum]3.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

YP_009913638.1 ribosomal protein S7 [Luffa acutangula]3.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

TrEMBL top hitse value%identityAlignment
A0A0A0L6M3 30S ribosomal protein S7, chloroplastic1.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

A0A218KG96 30S ribosomal protein S7, chloroplastic1.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

A0A343UM92 30S ribosomal protein S7, chloroplastic1.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

A0A6H0E3D0 Ribosomal protein S71.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

A0A6M5EWZ1 30S ribosomal protein S7, chloroplastic1.9e-2094.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

SwissProt top hitse value%identityAlignment
A4QJG0 30S ribosomal protein S7, chloroplastic1.5e-2294.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

A4QJP4 30S ribosomal protein S7, chloroplastic1.5e-2294.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

Q4VZK9 30S ribosomal protein S7, chloroplastic5.1e-2394.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK+SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

Q67ID1 30S ribosomal protein S7, chloroplastic1.5e-2294.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

Q67IL8 30S ribosomal protein S7, chloroplastic1.5e-2294.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein1.4e-0439.34Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYS------SELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRW+L A+ K   R ++++ S      +E++DA +  G A RK+E  H +   NR+FAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYS------SELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

ATCG00900.1 Ribosomal protein S7p/S5e family protein1.1e-2394.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

ATCG01240.1 ribosomal protein S71.1e-2394.55Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRWLLGAS+KRPGRNMAFK SSELVDAAKGSGDAIRKKEETHRM EANRAFAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHF

ATMG01270.1 mitochondrial ribosomal protein S71.4e-0439.34Show/hide
Query:  AIRWLLGASQKRPGRNMAFKYS------SELVDAAKGSGDAIRKKEETHRMTEANRAFAHF
        AIRW+L A+ K   R ++++ S      +E++DA +  G A RK+E  H +   NR+FAHF
Subjt:  AIRWLLGASQKRPGRNMAFKYS------SELVDAAKGSGDAIRKKEETHRMTEANRAFAHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCATTCGTTGGTTATTAGGGGCATCCCAAAAACGTCCGGGTCGAAATATGGCTTTCAAATACAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACG
TAAAAAGGAAGAGACTCATAGAATGACAGAGGCAAATAGAGCTTTTGCACATTTTCTT
mRNA sequenceShow/hide mRNA sequence
GCCATTCGTTGGTTATTAGGGGCATCCCAAAAACGTCCGGGTCGAAATATGGCTTTCAAATACAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACG
TAAAAAGGAAGAGACTCATAGAATGACAGAGGCAAATAGAGCTTTTGCACATTTTCTT
Protein sequenceShow/hide protein sequence
AIRWLLGASQKRPGRNMAFKYSSELVDAAKGSGDAIRKKEETHRMTEANRAFAHFL