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MS005356 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005356
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold6:264553..264741
RNA-Seq ExpressionMS005356
SyntenyMS005356
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143494.1 uncharacterized protein LOC111013371 [Momordica charantia]9.8e-1269.35Show/hide
Query:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        DF+ +DSIC      EEGSMS+E +  NIR+GSKFR+KEELQL VKKYCI QHYQFVV ESN
Subjt:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

XP_022147194.1 uncharacterized protein LOC111016204 [Momordica charantia]2.1e-1468Show/hide
Query:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        PNEE+PS      D +I+DSIC      EEGSMS+E N  NIR+GSKFR+KEELQL VKKYCIAQHYQFVV ESN
Subjt:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

XP_022149421.1 uncharacterized protein LOC111017851 [Momordica charantia]9.8e-1270.97Show/hide
Query:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        DF+I+DSIC      EEGSMSVE N  NIR+GSKFR++EELQL VKKY IAQHYQ VV ESN
Subjt:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

XP_022153141.1 uncharacterized protein LOC111020709 [Momordica charantia]3.6e-1465.33Show/hide
Query:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        PNEE+PS      DF+I+DSIC      EEGSMS++ N  NIR+GSKFR+KE+LQL VKKYCI QHYQFVV ESN
Subjt:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

XP_022154303.1 uncharacterized protein LOC111021598 [Momordica charantia]2.3e-1364Show/hide
Query:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        PNEE+PS      DF+I++SIC      EEGSMS+E N  NIR+ SKF++KEELQL VKKYCIAQHYQFVV +SN
Subjt:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

TrEMBL top hitse value%identityAlignment
A0A6J1CPH0 uncharacterized protein LOC1110133714.8e-1269.35Show/hide
Query:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        DF+ +DSIC      EEGSMS+E +  NIR+GSKFR+KEELQL VKKYCI QHYQFVV ESN
Subjt:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

A0A6J1D0A6 uncharacterized protein LOC1110162041.0e-1468Show/hide
Query:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        PNEE+PS      D +I+DSIC      EEGSMS+E N  NIR+GSKFR+KEELQL VKKYCIAQHYQFVV ESN
Subjt:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

A0A6J1D8B4 uncharacterized protein LOC1110178514.8e-1270.97Show/hide
Query:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        DF+I+DSIC      EEGSMSVE N  NIR+GSKFR++EELQL VKKY IAQHYQ VV ESN
Subjt:  DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

A0A6J1DJS7 uncharacterized protein LOC1110207091.7e-1465.33Show/hide
Query:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        PNEE+PS      DF+I+DSIC      EEGSMS++ N  NIR+GSKFR+KE+LQL VKKYCI QHYQFVV ESN
Subjt:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

A0A6J1DJZ1 uncharacterized protein LOC1110215981.1e-1364Show/hide
Query:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN
        PNEE+PS      DF+I++SIC      EEGSMS+E N  NIR+ SKF++KEELQL VKKYCIAQHYQFVV +SN
Subjt:  PNEESPS------DFDILDSIC------EEGSMSVERNAYNIRVGSKFRSKEELQL-VKKYCIAQHYQFVVRESN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTCCAAATGAAGAGTCGCCTTCAGATTTTGACATTTTAGATTCTATATGTGAAGAAGGGTCAATGTCCGTAGAAAGGAATGCATATAACATACGTGTAGGGTCAAAATT
TAGGAGCAAAGAGGAACTACAACTTGTTAAGAAATATTGTATTGCACAACATTACCAATTTGTTGTAAGAGAATCGAAT
mRNA sequenceShow/hide mRNA sequence
CGTCCAAATGAAGAGTCGCCTTCAGATTTTGACATTTTAGATTCTATATGTGAAGAAGGGTCAATGTCCGTAGAAAGGAATGCATATAACATACGTGTAGGGTCAAAATT
TAGGAGCAAAGAGGAACTACAACTTGTTAAGAAATATTGTATTGCACAACATTACCAATTTGTTGTAAGAGAATCGAAT
Protein sequenceShow/hide protein sequence
RPNEESPSDFDILDSICEEGSMSVERNAYNIRVGSKFRSKEELQLVKKYCIAQHYQFVVRESN