; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005362 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005362
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEndo-1,3(4)-beta-glucanase
Genome locationscaffold6:344865..345011
RNA-Seq ExpressionMS005362
SyntenyMS005362
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0008422 - beta-glucosidase activity (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0052861 - glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group (molecular function)
GO:0052862 - glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039339.1 putative endo-1,3(4)-beta-glucanase 2 precursor [Cucumis melo var. makuwa]9.0e-1377.55Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV K L+NGI+PWL GKF KNGFLYERK AGLV +NGA+ST EDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
XP_011656051.1 putative endo-1,3(4)-beta-glucanase 2 [Cucumis sativus]1.8e-1379.59Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV K L+NGI+PWL GKF KNGFLYERK AGLV +NGA+STTEDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
XP_022159208.1 probable endo-1,3(4)-beta-glucanase ARB_01444 [Momordica charantia]2.5e-1583.67Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        +PAVAK LRNGI+PWL+GKFG+NGF YERK AGLV ENGASSTTEDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
XP_022973486.1 putative endo-1,3(4)-beta-glucanase 2 [Cucurbita maxima]9.0e-1373.47Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV K L+ GI+PWL+GKFG+NGFLY+RK AGLV +NGA+S TEDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
XP_038889504.1 putative endo-1,3(4)-beta-glucanase 2 [Benincasa hispida]4.1e-1377.55Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV + L+NGI+PWL GKF KNGFLYERK AGLV +NGA+STTEDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
TrEMBL top hitse value%identityAlignment
A0A0A0KW06 Endo-1,3(4)-beta-glucanase8.8e-1479.59Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV K L+NGI+PWL GKF KNGFLYERK AGLV +NGA+STTEDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
A0A142BTQ9 Endo-1,3(4)-beta-glucanase4.4e-1377.55Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV K L+NGI+PWL GKF KNGFLYERK AGLV +NGA+ST EDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
A0A5A7TDJ6 Endo-1,3(4)-beta-glucanase4.4e-1377.55Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV K L+NGI+PWL GKF KNGFLYERK AGLV +NGA+ST EDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
A0A6J1DY72 Endo-1,3(4)-beta-glucanase1.2e-1583.67Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        +PAVAK LRNGI+PWL+GKFG+NGF YERK AGLV ENGASSTTEDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
A0A6J1I8S4 Endo-1,3(4)-beta-glucanase4.4e-1373.47Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IPAV K L+ GI+PWL+GKFG+NGFLY+RK AGLV +NGA+S TEDFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18310.1 glycosyl hydrolase family 81 protein8.4e-0946.94Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IP +   L+N I PWL+G F  NGFLY+ K  GL+ + G+  +  DFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
AT5G15870.1 glycosyl hydrolase family 81 protein2.9e-0948.98Show/hide
Query:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF
        IP +   L+N I PWLNG FG NGFLY+ K  G++ + G+  +  DFGF
Subjt:  IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCCAGCGGTGGCGAAGTTGTTGAGGAACGGGATTCGGCCGTGGCTGAACGGGAAATTTGGTAAAAACGGGTTTCTGTATGAACGGAAAGGGGCCGGATTGGTGATGGA
AAACGGCGCTTCGAGCACGACGGAGGATTTCGGATTC
mRNA sequenceShow/hide mRNA sequence
ATTCCAGCGGTGGCGAAGTTGTTGAGGAACGGGATTCGGCCGTGGCTGAACGGGAAATTTGGTAAAAACGGGTTTCTGTATGAACGGAAAGGGGCCGGATTGGTGATGGA
AAACGGCGCTTCGAGCACGACGGAGGATTTCGGATTC
Protein sequenceShow/hide protein sequence
IPAVAKLLRNGIRPWLNGKFGKNGFLYERKGAGLVMENGASSTTEDFGF