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MS005376 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005376
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGDSL esterase/lipase 5
Genome locationscaffold1154:52321..52548
RNA-Seq ExpressionMS005376
SyntenyMS005376
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016298 - lipase activity (molecular function)
InterPro domainsIPR036514 - SGNH hydrolase superfamily
IPR044552 - GDSL esterase/lipase GLIP1-5/GLL25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN58468.1 hypothetical protein Csa_001166 [Cucumis sativus]1.0e-2678.67Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQR+  PLKYGLKEGK ACCGTG + GVFSC GRR VKEF +CRNP+E+VFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

XP_004144475.2 GDSL esterase/lipase 5 [Cucumis sativus]1.0e-2678.67Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQR+  PLKYGLKEGK ACCGTG + GVFSC GRR VKEF +CRNP+E+VFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

XP_008460338.1 PREDICTED: GDSL esterase/lipase 5 [Cucumis melo]2.0e-2780Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQRM  PLKYGLKEGK+ACCGTG + GVFSC GRR VKEF +CRNP+E+VFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

XP_022152559.1 GDSL esterase/lipase 5 [Momordica charantia]1.2e-3292Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSSR+RQRM RPLKYGLKEGKKACCGTGSYGGVFSC GRR VKEF LCRNPDEYVFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

XP_038904622.1 GDSL esterase/lipase 5 [Benincasa hispida]1.3e-2678.67Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQRM  PLKYGL+EGK+ACCGTG Y GVFSC GRR VKEF +C NP+E+VFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

TrEMBL top hitse value%identityAlignment
A0A0A0L9G1 Uncharacterized protein4.8e-2778.67Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQR+  PLKYGLKEGK ACCGTG + GVFSC GRR VKEF +CRNP+E+VFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

A0A1S3CCC4 GDSL esterase/lipase 59.7e-2880Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQRM  PLKYGLKEGK+ACCGTG + GVFSC GRR VKEF +CRNP+E+VFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

A0A5D3D6J2 GDSL esterase/lipase 59.7e-2880Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQRM  PLKYGLKEGK+ACCGTG + GVFSC GRR VKEF +CRNP+E+VFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

A0A6J1DGD2 GDSL esterase/lipase 55.9e-3392Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSSR+RQRM RPLKYGLKEGKKACCGTGSYGGVFSC GRR VKEF LCRNPDEYVFWDSYHLTENLHKQLA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

A0A6J1IZX8 GDSL esterase/lipase 5-like1.1e-2677.33Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRG-RRVKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        S+YDFSS +RQRM  PLKYGLKEG++ACCGTG + GVFSC G RRVKEF  CRNP+EYVFWDSYHLTE+LHK+LA
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRG-RRVKEFGLCRNPDEYVFWDSYHLTENLHKQLA

SwissProt top hitse value%identityAlignment
H6U1I8 GDSL lipase1.6e-1448.61Show/hide
Query:  YDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRRVKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +D S+ +  RM  P KYG KEG+ ACCG+G +GG + C   R+KEFGLC N  EY F+D +H  E   +Q A
Subjt:  YDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRRVKEFGLCRNPDEYVFWDSYHLTENLHKQLA

Q9FLN0 GDSL esterase/lipase 11.6e-1443.42Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +++D+ + + +RM  P KYG KEGKKACCG+G   G+ +C GR    + + LC N  +Y+F+D +HLTE  ++Q+A
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

Q9SSA7 GDSL esterase/lipase 56.5e-2154.55Show/hide
Query:  ELSVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        + S++D +  +R RM  P K+G KEG++ACCGTG + GVFSC G+R VKE+ LC NP +Y+FWDS HLT+N + Q A
Subjt:  ELSVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

Q9SYF0 GDSL esterase/lipase 24.5e-1443.42Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +++D+ + +  RM  P KYG KEGK ACCGTG   G+ +C GR    + + LC    +Y+F+D +HLTE  H+Q+A
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

Q9SYF5 GDSL esterase/lipase 33.1e-1545.45Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRRV---KEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +++D+ + + +R+  P KYG KEGKKACCG+G   G+ +C G R+   + +GLC N  +Y+F+DS HLTE  H+Q+A
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRRV---KEFGLCRNPDEYVFWDSYHLTENLHKQLA

Arabidopsis top hitse value%identityAlignment
AT1G53920.1 GDSL-motif lipase 54.6e-2254.55Show/hide
Query:  ELSVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        + S++D +  +R RM  P K+G KEG++ACCGTG + GVFSC G+R VKE+ LC NP +Y+FWDS HLT+N + Q A
Subjt:  ELSVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR-VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

AT1G53940.1 GDSL-motif lipase 23.2e-1543.42Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +++D+ + +  RM  P KYG KEGK ACCGTG   G+ +C GR    + + LC    +Y+F+D +HLTE  H+Q+A
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA

AT1G53990.1 GDSL-motif lipase 32.2e-1645.45Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRRV---KEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +++D+ + + +R+  P KYG KEGKKACCG+G   G+ +C G R+   + +GLC N  +Y+F+DS HLTE  H+Q+A
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRRV---KEFGLCRNPDEYVFWDSYHLTENLHKQLA

AT3G14225.1 GDSL-motif lipase 45.5e-1543.42Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSC--RGRRVKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +++DF + + QR+  P +YG KEG+ ACCG+G   G+ +C  R    + + LC N D+YVF+D  HLTE  H+Q+A
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSC--RGRRVKEFGLCRNPDEYVFWDSYHLTENLHKQLA

AT5G40990.1 GDSL lipase 11.1e-1543.42Show/hide
Query:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA
        +++D+ + + +RM  P KYG KEGKKACCG+G   G+ +C GR    + + LC N  +Y+F+D +HLTE  ++Q+A
Subjt:  SVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRR--VKEFGLCRNPDEYVFWDSYHLTENLHKQLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCTGTCAGTGTACGACTTCAGCAGCAGGATGAGGCAGAGAATGGGGAGACCATTGAAATATGGATTAAAGGAAGGGAAGAAGGCATGCTGCGGGACAGGGAGC
TATGGAGGAGTGTTCAGCTGCAGAGGAAGAAGAGTGAAGGAGTTTGGACTGTGTAGGAATCCTGATGAATATGTGTTTTGGGATTCTTACCATCTCACTGAGAAT
CTCCACAAACAGCTTGCT
mRNA sequenceShow/hide mRNA sequence
GAGCTGTCAGTGTACGACTTCAGCAGCAGGATGAGGCAGAGAATGGGGAGACCATTGAAATATGGATTAAAGGAAGGGAAGAAGGCATGCTGCGGGACAGGGAGC
TATGGAGGAGTGTTCAGCTGCAGAGGAAGAAGAGTGAAGGAGTTTGGACTGTGTAGGAATCCTGATGAATATGTGTTTTGGGATTCTTACCATCTCACTGAGAAT
CTCCACAAACAGCTTGCT
Protein sequenceShow/hide protein sequence
ELSVYDFSSRMRQRMGRPLKYGLKEGKKACCGTGSYGGVFSCRGRRVKEFGLCRNPDEYVFWDSYHLTENLHKQLA