; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005390 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005390
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAP2/ERF transcription factor SNZ
Genome locationscaffold451:55956..56468
RNA-Seq ExpressionMS005390
SyntenyMS005390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574778.1 hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sororia]4.3e-7083.05Show/hide
Query:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDD-
        ME MAEG A+PSLPDLV+SLEQASFMAKQL STSNP+HLLQIYNSLHQAN NLS+FLS   +PQSLPLP PS+N+N LSSATSAAFND GNEPMQVGDD 
Subjt:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDD-

Query:  ----EQNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
            EQNSKG+IEMVEEKMKDCFIKNKRVKR+LSPS AAMAEERR+HRD+RF AT+KGFDP VERLRALDLISQFHA
Subjt:  ----EQNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

XP_008460165.1 PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo]2.5e-6278.53Show/hide
Query:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDE
        ME MAEG A PSL DL+ SL+QA+FMAKQLPSTSNP+HLLQIYNSLHQAN NLS+FLS T  PQSLPLP PS+NE SLSSATSAAF     +PMQVGDD+
Subjt:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDE

Query:  -----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
             QNSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AAMAEERR+H  +RF AT KGFDP VERLRALDLISQFHA
Subjt:  -----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

XP_022156139.1 uncharacterized protein LOC111023095 [Momordica charantia]4.3e-8699.42Show/hide
Query:  MEAMAEGASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ
        MEAMAEGASPSLPDLV+SLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ
Subjt:  MEAMAEGASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ

Query:  NSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
        NSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
Subjt:  NSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

XP_023548054.1 uncharacterized protein LOC111806806 [Cucurbita pepo subsp. pepo]2.1e-6980.66Show/hide
Query:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDD-
        ME MAEG A+PSLPDLV+SLEQASFMAKQL STSNP+HLLQIYNSLHQAN NLS+FLS   +PQSLP+P PS+N+N LSSATSAAFND GNEPMQVGDD 
Subjt:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDD-

Query:  --------EQNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
                EQNSKG+IEMVEEKMKDCFIKNKRVKR+LSPS AAMAEERR+HRD+RF AT+KGFDP VERLRALDLISQFHA
Subjt:  --------EQNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

XP_038876419.1 uncharacterized protein LOC120068853 [Benincasa hispida]4.2e-7385.8Show/hide
Query:  MEAMAEGASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDD--
        MEAMAEGA+PSL DL++SLEQASFMAKQLPS+SNP+HLLQIYNSLHQAN NLS+FLS TQF QSLPLPRPS+NENSLSSATSAAFNDDGNEPMQVGDD  
Subjt:  MEAMAEGASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDD--

Query:  ---EQNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
           E +SKG+IEMVEEKMKDCFIKNKRVKRQLSPS AAMAEERR+HRD+RF AT KGFDP VERLRALDLISQFHA
Subjt:  ---EQNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

TrEMBL top hitse value%identityAlignment
A0A0A0KBH1 Uncharacterized protein1.4e-6176.8Show/hide
Query:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQS----LPLPRPSLNENSLSSATSAAFNDDGNEPMQV
        MEAMA+G A PSL DL++SL+QA+FMAKQLPSTSNP+HLLQIYNSLHQAN NLS+FLS T  PQS    LPLP PS+NE SLSSATSAAF     +PMQV
Subjt:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQS----LPLPRPSLNENSLSSATSAAFNDDGNEPMQV

Query:  GDDE-----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
        GDD+     QNSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AAMAEERR+H  +RF AT KGFDP VERLRALDLISQFHA
Subjt:  GDDE-----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

A0A1S3CC06 uncharacterized protein LOC1034990581.2e-6278.53Show/hide
Query:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDE
        ME MAEG A PSL DL+ SL+QA+FMAKQLPSTSNP+HLLQIYNSLHQAN NLS+FLS T  PQSLPLP PS+NE SLSSATSAAF     +PMQVGDD+
Subjt:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDE

Query:  -----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
             QNSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AAMAEERR+H  +RF AT KGFDP VERLRALDLISQFHA
Subjt:  -----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

A0A4U5MZ71 Uncharacterized protein9.8e-4465.85Show/hide
Query:  PSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ---NSKGSI
        P LPDL++SLEQA+ MAKQLPST++P+HLLQIY+SLHQA+H+LS FLS      S PL +P   ENSLSSAT A  +++G+EPMQVGDD++   N   SI
Subjt:  PSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ---NSKGSI

Query:  EMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFH
        E VEE+MKDCFIKNKR KR LSPST A+AEERR++ DD FG    GFDPR  RLRALDLI QFH
Subjt:  EMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFH

A0A5D3DLF5 Putative AP2-like ethylene-responsive transcription factor SNZ1.2e-6278.53Show/hide
Query:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDE
        ME MAEG A PSL DL+ SL+QA+FMAKQLPSTSNP+HLLQIYNSLHQAN NLS+FLS T  PQSLPLP PS+NE SLSSATSAAF     +PMQVGDD+
Subjt:  MEAMAEG-ASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDE

Query:  -----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
             QNSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AAMAEERR+H  +RF AT KGFDP VERLRALDLISQFHA
Subjt:  -----QNSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

A0A6J1DSG3 uncharacterized protein LOC1110230952.1e-8699.42Show/hide
Query:  MEAMAEGASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ
        MEAMAEGASPSLPDLV+SLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ
Subjt:  MEAMAEGASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQ

Query:  NSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
        NSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
Subjt:  NSKGSIEMVEEKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01840.1 unknown protein6.3e-1942.6Show/hide
Query:  DLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQNSK--------GS
        +L+ SLEQA+ MA+Q+ +T   + LLQI +SL  A+  LS FL+      S+P       E S SS           EPMQ+G++E+            +
Subjt:  DLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQNSK--------GS

Query:  IEMVEEKMKDCFIKNKRVKRQLSPSTAAM---AEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA
        IE VEEKM++CFI+NKR+KR LSPS+A +   A E R  RD  F +     DP   +LRALDLI QFHA
Subjt:  IEMVEEKMKDCFIKNKRVKRQLSPSTAAM---AEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATGGCAGAGGGAGCTTCACCATCATTGCCCGACCTTGTAGTGTCGCTGGAGCAAGCATCGTTCATGGCTAAGCAGCTTCCTTCCACCTCTAACCCATCCCA
TCTCCTTCAAATCTACAATTCACTCCACCAAGCAAACCACAACCTCTCCATTTTCCTCTCCGGAACCCAGTTTCCCCAATCTCTCCCTCTCCCTCGACCTTCCTTGAACG
AAAATTCCCTCTCCTCTGCCACCAGCGCCGCCTTCAACGACGACGGGAACGAGCCGATGCAGGTCGGCGATGACGAGCAGAACTCCAAGGGCAGCATTGAAATGGTGGAG
GAGAAGATGAAGGATTGCTTCATCAAGAATAAGCGGGTTAAGCGTCAACTCTCGCCGTCGACGGCGGCTATGGCGGAGGAAAGGCGGTTACATCGCGATGATCGGTTCGG
TGCCACATCGAAAGGTTTCGATCCTCGTGTTGAGAGATTGCGAGCGTTGGACCTTATTTCCCAGTTTCATGCG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCATGGCAGAGGGAGCTTCACCATCATTGCCCGACCTTGTAGTGTCGCTGGAGCAAGCATCGTTCATGGCTAAGCAGCTTCCTTCCACCTCTAACCCATCCCA
TCTCCTTCAAATCTACAATTCACTCCACCAAGCAAACCACAACCTCTCCATTTTCCTCTCCGGAACCCAGTTTCCCCAATCTCTCCCTCTCCCTCGACCTTCCTTGAACG
AAAATTCCCTCTCCTCTGCCACCAGCGCCGCCTTCAACGACGACGGGAACGAGCCGATGCAGGTCGGCGATGACGAGCAGAACTCCAAGGGCAGCATTGAAATGGTGGAG
GAGAAGATGAAGGATTGCTTCATCAAGAATAAGCGGGTTAAGCGTCAACTCTCGCCGTCGACGGCGGCTATGGCGGAGGAAAGGCGGTTACATCGCGATGATCGGTTCGG
TGCCACATCGAAAGGTTTCGATCCTCGTGTTGAGAGATTGCGAGCGTTGGACCTTATTTCCCAGTTTCATGCG
Protein sequenceShow/hide protein sequence
MEAMAEGASPSLPDLVVSLEQASFMAKQLPSTSNPSHLLQIYNSLHQANHNLSIFLSGTQFPQSLPLPRPSLNENSLSSATSAAFNDDGNEPMQVGDDEQNSKGSIEMVE
EKMKDCFIKNKRVKRQLSPSTAAMAEERRLHRDDRFGATSKGFDPRVERLRALDLISQFHA