; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005395 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005395
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein EFR3-like protein B isoform X1
Genome locationscaffold451:94742..96696
RNA-Seq ExpressionMS005395
SyntenyMS005395
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAX94774.1 cyclin-related protein 1, partial [Cucumis sativus]3.3e-3554.3Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF
        TP PC  LAKLAFPD+DE MPP ALT DEAFLEPSGSQSD KTSLSI NL+ILNVNQLLESV +T          +APV  +      C  L +      
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF

Query:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
        S    + H K     +  ++  S IETLYP LP                ET +GQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

XP_004140882.1 protein SEMI-ROLLED LEAF 2 isoform X2 [Cucumis sativus]3.3e-3554.3Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF
        TP PC  LAKLAFPD+DE MPP ALT DEAFLEPSGSQSD KTSLSI NL+ILNVNQLLESV +T          +APV  +      C  L +      
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF

Query:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
        S    + H K     +  ++  S IETLYP LP                ET +GQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

XP_022150362.1 uncharacterized protein LOC111018549 isoform X1 [Momordica charantia]4.5e-3755.79Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----
        TP PC  LAKLAFPDFDEDMPPTALT DEAFLEPSGSQSD KTSLSI NL+IL+VNQLLESV +T          +APV  +      C  L        
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----

Query:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
          L +F Q  + S         ++  S IETLYP LP                ETAKGQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

XP_022150364.1 uncharacterized protein LOC111018549 isoform X2 [Momordica charantia]4.5e-3755.79Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----
        TP PC  LAKLAFPDFDEDMPPTALT DEAFLEPSGSQSD KTSLSI NL+IL+VNQLLESV +T          +APV  +      C  L        
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----

Query:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
          L +F Q  + S         ++  S IETLYP LP                ETAKGQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

XP_031742729.1 protein SEMI-ROLLED LEAF 2 isoform X3 [Cucumis sativus]3.3e-3554.3Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF
        TP PC  LAKLAFPD+DE MPP ALT DEAFLEPSGSQSD KTSLSI NL+ILNVNQLLESV +T          +APV  +      C  L +      
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF

Query:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
        S    + H K     +  ++  S IETLYP LP                ET +GQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

TrEMBL top hitse value%identityAlignment
A0A5A7SR71 Protein EFR3-like protein B isoform X16.0e-3553.76Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF
        TP PC  LAKLAFPD+DE MPP ALT DEAFLEPSGSQSD KTSLSI NL+IL+VNQLLESV +T          +APV  +      C  L +      
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF

Query:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
        S    + H K     +  ++  S IETLYP LP                ET +GQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

A0A5D3BUQ1 Protein EFR3-like protein B isoform X16.0e-3553.76Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF
        TP PC  LAKLAFPD+DE MPP ALT DEAFLEPSGSQSD KTSLSI NL+IL+VNQLLESV +T          +APV  +      C  L +      
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF

Query:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
        S    + H K     +  ++  S IETLYP LP                ET +GQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

A0A6J1D990 uncharacterized protein LOC111018549 isoform X12.2e-3755.79Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----
        TP PC  LAKLAFPDFDEDMPPTALT DEAFLEPSGSQSD KTSLSI NL+IL+VNQLLESV +T          +APV  +      C  L        
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----

Query:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
          L +F Q  + S         ++  S IETLYP LP                ETAKGQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

A0A6J1DBA9 uncharacterized protein LOC111018549 isoform X22.2e-3755.79Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----
        TP PC  LAKLAFPDFDEDMPPTALT DEAFLEPSGSQSD KTSLSI NL+IL+VNQLLESV +T          +APV  +      C  L        
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLH----

Query:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
          L +F Q  + S         ++  S IETLYP LP                ETAKGQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  --LWNFSQHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

Q52UN1 Cyclin-related protein 1 (Fragment)1.6e-3554.3Show/hide
Query:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF
        TP PC  LAKLAFPD+DE MPP ALT DEAFLEPSGSQSD KTSLSI NL+ILNVNQLLESV +T          +APV  +      C  L +      
Subjt:  TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQT--------FHAAPVFKFFHCSPNCPNLSNLHLWNF

Query:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA
        S    + H K     +  ++  S IETLYP LP                ET +GQDQP LCSHEYGR +LRL PPSSPYDKFLKAA
Subjt:  S--QHWDHSKRFIIFQLCLLSGSRIETLYPSLP----------------ETAKGQDQP-LCSHEYGRCTLRLPPPSSPYDKFLKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTCCATGTCCATGTTATTCACTTGCTAAGCTGGCATTTCCAGATTTTGATGAGGATATGCCTCCAACTGCTTTGACAGGTGATGAAGCCTTCCTTGAGCCAAGTGGAAG
CCAGTCTGATGGTAAAACGTCACTTTCCATCTGTAACCTCAACATTTTAAACGTTAATCAGCTTTTGGAATCAGTAAGACAAACATTTCATGCTGCTCCAGTCTTCAAAT
TCTTTCATTGTAGTCCTAACTGCCCGAATCTTTCTAATTTGCACTTATGGAATTTTTCACAGCATTGGGATCATAGTAAACGCTTTATTATTTTCCAATTATGCCTACTT
TCTGGTTCCAGAATTGAAACTTTATATCCCTCCTTACCTGAGACAGCCAAAGGACAGGATCAGCCTCTTTGTTCACATGAATATGGGCGCTGTACTTTAAGATTACCACC
ACCTTCAAGTCCATATGACAAGTTCTTAAAAGCTGCTGAATCT
mRNA sequenceShow/hide mRNA sequence
ACTCCATGTCCATGTTATTCACTTGCTAAGCTGGCATTTCCAGATTTTGATGAGGATATGCCTCCAACTGCTTTGACAGGTGATGAAGCCTTCCTTGAGCCAAGTGGAAG
CCAGTCTGATGGTAAAACGTCACTTTCCATCTGTAACCTCAACATTTTAAACGTTAATCAGCTTTTGGAATCAGTAAGACAAACATTTCATGCTGCTCCAGTCTTCAAAT
TCTTTCATTGTAGTCCTAACTGCCCGAATCTTTCTAATTTGCACTTATGGAATTTTTCACAGCATTGGGATCATAGTAAACGCTTTATTATTTTCCAATTATGCCTACTT
TCTGGTTCCAGAATTGAAACTTTATATCCCTCCTTACCTGAGACAGCCAAAGGACAGGATCAGCCTCTTTGTTCACATGAATATGGGCGCTGTACTTTAAGATTACCACC
ACCTTCAAGTCCATATGACAAGTTCTTAAAAGCTGCTGAATCT
Protein sequenceShow/hide protein sequence
TPCPCYSLAKLAFPDFDEDMPPTALTGDEAFLEPSGSQSDGKTSLSICNLNILNVNQLLESVRQTFHAAPVFKFFHCSPNCPNLSNLHLWNFSQHWDHSKRFIIFQLCLL
SGSRIETLYPSLPETAKGQDQPLCSHEYGRCTLRLPPPSSPYDKFLKAAES