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MS005396 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005396
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein EFR3-like protein B isoform X1
Genome locationscaffold451:102448..102627
RNA-Seq ExpressionMS005396
SyntenyMS005396
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033048.1 protein EFR3-like protein B isoform X1 [Cucumis melo var. makuwa]7.9e-1184.44Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEG S DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

KAG6575358.1 Protein SEMI-ROLLED LEAF 2, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1273.33Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVLLSLSLSLSRYYTNIV
        TD+TYMFNLE IIPKLCQLALEG S +EAPHL+S  LQ LASMVLLS SL LS    N V
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVLLSLSLSLSRYYTNIV

XP_008445732.1 PREDICTED: uncharacterized protein LOC103488670 isoform X3 [Cucumis melo]7.9e-1184.44Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEG S DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

XP_016900130.1 PREDICTED: uncharacterized protein LOC103488670 isoform X2 [Cucumis melo]7.9e-1184.44Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEG S DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

XP_022150362.1 uncharacterized protein LOC111018549 isoform X1 [Momordica charantia]1.2e-1186.67Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEGGS DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

TrEMBL top hitse value%identityAlignment
A0A1S3BCX8 uncharacterized protein LOC103488670 isoform X33.8e-1184.44Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEG S DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

A0A1S4DWN6 uncharacterized protein LOC103488670 isoform X23.8e-1184.44Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEG S DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

A0A5A7SR71 Protein EFR3-like protein B isoform X13.8e-1184.44Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEG S DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

A0A5D3BUQ1 Protein EFR3-like protein B isoform X13.8e-1184.44Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEG S DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

A0A6J1D990 uncharacterized protein LOC111018549 isoform X15.9e-1286.67Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL
        TDSTYMFNLE IIPKLCQLALEGGS DEAPHL+S  LQTLASM+L
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05960.1 ARM repeat superfamily protein1.4e-0552.27Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMV
        T +++MFNLE +IPKLCQLA E G  + +  L+S  +Q LA MV
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMV

AT1G05960.2 ARM repeat superfamily protein1.4e-0552.27Show/hide
Query:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMV
        T +++MFNLE +IPKLCQLA E G  + +  L+S  +Q LA MV
Subjt:  TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMV

AT2G41830.1 Uncharacterized protein3.7e-0648.89Show/hide
Query:  DSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVLL
        D + +FNLE  +PKLCQL LEGG  D +  L++  LQ L++M+ L
Subjt:  DSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVLL

AT5G21080.1 Uncharacterized protein1.2e-0441.67Show/hide
Query:  DSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVLLSLSLS-LSRYYTNIV
        + TYMFNL+ +IPK+C LA E G  D   +L +  LQ L+S+V      S +S  + N+V
Subjt:  DSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVLLSLSLS-LSRYYTNIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTGATAGCACATATATGTTCAACTTAGAGTGCATTATTCCAAAACTTTGCCAATTGGCTCTAGAAGGTGGAAGTTATGATGAGGCACCTCATTTGCAGTCAATTGAACT
CCAAACTCTAGCTTCTATGGTATTACTCTCTCTTTCTCTATCTCTCTCTAGGTATTATACCAATATCGTA
mRNA sequenceShow/hide mRNA sequence
ACTGATAGCACATATATGTTCAACTTAGAGTGCATTATTCCAAAACTTTGCCAATTGGCTCTAGAAGGTGGAAGTTATGATGAGGCACCTCATTTGCAGTCAATTGAACT
CCAAACTCTAGCTTCTATGGTATTACTCTCTCTTTCTCTATCTCTCTCTAGGTATTATACCAATATCGTA
Protein sequenceShow/hide protein sequence
TDSTYMFNLECIIPKLCQLALEGGSYDEAPHLQSIELQTLASMVLLSLSLSLSRYYTNIV