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MS005437 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005437
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProlamin_like domain-containing protein
Genome locationscaffold641:181049..181435
RNA-Seq ExpressionMS005437
SyntenyMS005437
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038539.1 hypothetical protein E6C27_scaffold92G00660 [Cucumis melo var. makuwa]4.4e-4375Show/hide
Query:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP
        MSKS RFFGF L ALA+SSS QSAF++RKI   EA+ S D     CWDAINAVEGCQN+ID ++KS EIEVS+DCCKVILHG+P KC+ V+FSSGGEFSP
Subjt:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP

Query:  EFSGAVNEYCDGMGITPPVLEPED
        E SGAVNEYCDGMGITPPVLE ED
Subjt:  EFSGAVNEYCDGMGITPPVLEPED

KAB2067183.1 hypothetical protein ES319_A09G209500v1 [Gossypium barbadense]7.9e-0834.51Show/hide
Query:  LLFALAVSSSIQSAFSL-----RKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGA
        L+ ALA + +I  A S+     R +P+P            CW  IN   GC++EI  SL   +I++S+ CC+ +  G+  KC   +F+  G FSPEF   
Subjt:  LLFALAVSSSIQSAFSL-----RKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGA

Query:  VNEYCDGMGITPP
        +  YC  +G+T P
Subjt:  VNEYCDGMGITPP

KAE8652857.1 hypothetical protein Csa_023774, partial [Cucumis sativus]4.5e-1980Show/hide
Query:  EVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGAVNEYCDGMGITPPVLEPED-KTEE
        +VS+DCCKVILHG+P KC+ V+FSSGGEFSP+ SGAVNEYCDGMGITPPVLE ED K EE
Subjt:  EVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGAVNEYCDGMGITPPVLEPED-KTEE

KAG6571831.1 hypothetical protein SDJN03_28559, partial [Cucurbita argyrosperma subsp. sororia]6.4e-4274.17Show/hide
Query:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP
        MSKSVRFFGF L AL +SS I SAF+LRK   P+AIDS DWS AAC DA+NAVEGCQ EIDM++ S EIEVS++CC+VILHGLP KC+ V+FSSGGE S 
Subjt:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP

Query:  EFSGAVNEYCDGMGITPPVL
        E SGAV EYCDGMGITPPVL
Subjt:  EFSGAVNEYCDGMGITPPVL

XP_022931003.1 uncharacterized protein LOC111437329 [Cucurbita moschata]4.9e-4274.6Show/hide
Query:  MSKSVRFFGFLLFALAVSSSIQ--SAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEF
        M KSVRF GFLL ALA+SSSIQ  SAF+LR I  PEA++S DWSAA CWDAI AVEGCQ+EIDM++KS EIEVS DCC+ ILHGLP KC+  +FSSGGEF
Subjt:  MSKSVRFFGFLLFALAVSSSIQ--SAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEF

Query:  SPEFSGAVNEYCDGMGITPPVLEPED
        S E SGAVNEYCDGMGITPPVLE ++
Subjt:  SPEFSGAVNEYCDGMGITPPVLEPED

TrEMBL top hitse value%identityAlignment
A0A0A0LEG0 Prolamin_like domain-containing protein1.4e-4272.87Show/hide
Query:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP
        MSKSVRFFGF L  LA SSS  SAF++RKI   EA+ S D     CWDAINAV+GCQNEID ++KS EIEVS+DCCKVILHG+P KC+ V+FSSGGEFSP
Subjt:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP

Query:  EFSGAVNEYCDGMGITPPVLEPED-KTEE
        + SGAVNEYCDGMGITPPVLE ED K EE
Subjt:  EFSGAVNEYCDGMGITPPVLEPED-KTEE

A0A5A7TB28 Prolamin_like domain-containing protein2.1e-4375Show/hide
Query:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP
        MSKS RFFGF L ALA+SSS QSAF++RKI   EA+ S D     CWDAINAVEGCQN+ID ++KS EIEVS+DCCKVILHG+P KC+ V+FSSGGEFSP
Subjt:  MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSP

Query:  EFSGAVNEYCDGMGITPPVLEPED
        E SGAVNEYCDGMGITPPVLE ED
Subjt:  EFSGAVNEYCDGMGITPPVLEPED

A0A5D2P8P3 Prolamin_like domain-containing protein3.8e-0834.51Show/hide
Query:  LLFALAVSSSIQSAFSL-----RKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGA
        L+ ALA + +I  A S+     R +P+P            CW  IN   GC++EI  SL   +I++S+ CC+ +  G+  KC   +F+  G FSPEF   
Subjt:  LLFALAVSSSIQSAFSL-----RKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGA

Query:  VNEYCDGMGITPP
        +  YC  +G+T P
Subjt:  VNEYCDGMGITPP

A0A5J5UI71 Prolamin_like domain-containing protein3.8e-0834.51Show/hide
Query:  LLFALAVSSSIQSAFSL-----RKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGA
        L+ ALA + +I  A S+     R +P+P            CW  IN   GC++EI  SL   +I++S+ CC+ +  G+  KC   +F+  G FSPEF   
Subjt:  LLFALAVSSSIQSAFSL-----RKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGA

Query:  VNEYCDGMGITPP
        +  YC  +G+T P
Subjt:  VNEYCDGMGITPP

A0A6J1EX44 uncharacterized protein LOC1114373292.4e-4274.6Show/hide
Query:  MSKSVRFFGFLLFALAVSSSIQ--SAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEF
        M KSVRF GFLL ALA+SSSIQ  SAF+LR I  PEA++S DWSAA CWDAI AVEGCQ+EIDM++KS EIEVS DCC+ ILHGLP KC+  +FSSGGEF
Subjt:  MSKSVRFFGFLLFALAVSSSIQ--SAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEF

Query:  SPEFSGAVNEYCDGMGITPPVLEPED
        S E SGAVNEYCDGMGITPPVLE ++
Subjt:  SPEFSGAVNEYCDGMGITPPVLEPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAATCGGTTCGATTTTTCGGCTTCCTTCTCTTTGCCCTAGCGGTTTCATCGTCAATTCAATCGGCCTTCTCTCTCAGGAAGATTCCCGAGCCGGAGGCGATTGA
TTCGGACGATTGGTCGGCGGCGGCGTGTTGGGACGCGATAAACGCGGTGGAAGGGTGCCAGAATGAGATCGACATGTCGTTGAAGAGCGGTGAGATCGAGGTGAGTTTCG
ATTGCTGCAAAGTGATATTACATGGCCTGCCGCTCAAATGCAGCGGCGTGATTTTTTCGTCCGGCGGAGAGTTCTCGCCGGAGTTCAGCGGCGCCGTTAACGAATATTGC
GACGGGATGGGAATTACTCCGCCGGTGCTTGAGCCGGAGGATAAAACTGAAGAAACT
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAATCGGTTCGATTTTTCGGCTTCCTTCTCTTTGCCCTAGCGGTTTCATCGTCAATTCAATCGGCCTTCTCTCTCAGGAAGATTCCCGAGCCGGAGGCGATTGA
TTCGGACGATTGGTCGGCGGCGGCGTGTTGGGACGCGATAAACGCGGTGGAAGGGTGCCAGAATGAGATCGACATGTCGTTGAAGAGCGGTGAGATCGAGGTGAGTTTCG
ATTGCTGCAAAGTGATATTACATGGCCTGCCGCTCAAATGCAGCGGCGTGATTTTTTCGTCCGGCGGAGAGTTCTCGCCGGAGTTCAGCGGCGCCGTTAACGAATATTGC
GACGGGATGGGAATTACTCCGCCGGTGCTTGAGCCGGAGGATAAAACTGAAGAAACT
Protein sequenceShow/hide protein sequence
MSKSVRFFGFLLFALAVSSSIQSAFSLRKIPEPEAIDSDDWSAAACWDAINAVEGCQNEIDMSLKSGEIEVSFDCCKVILHGLPLKCSGVIFSSGGEFSPEFSGAVNEYC
DGMGITPPVLEPEDKTEET