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MS005438 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005438
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationscaffold641:182211..182300
RNA-Seq ExpressionMS005438
SyntenyMS005438
Gene Ontology termsNA
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037870.1 Mannan endo-1,4-beta-mannosidase 7 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-0586.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF +S+ARK+GIKLILSLVNNYENMGGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

XP_010113415.1 mannan endo-1,4-beta-mannosidase 7 [Morus notabilis]1.9e-0583.33Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF++++ARKHGIKLILSLVNNYEN GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

XP_022941053.1 mannan endo-1,4-beta-mannosidase 7-like [Cucurbita moschata]1.9e-0586.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF +S+ARK+GIKLILSLVNNYENMGGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

XP_023523795.1 mannan endo-1,4-beta-mannosidase 7-like isoform X1 [Cucurbita pepo subsp. pepo]1.9e-0586.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF +S+ARK+GIKLILSLVNNYENMGGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

XP_027913706.1 mannan endo-1,4-beta-mannosidase 7 [Vigna unguiculata]6.5e-0690Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF+IS+ARKHGIKLILSLVNNYEN GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

TrEMBL top hitse value%identityAlignment
A0A4D6LRD9 Mannan endo-1,4-beta-mannosidase3.2e-0690Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF+IS+ARKHGIKLILSLVNNYEN GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

A0A5B7B161 Mannan endo-1,4-beta-mannosidase (Fragment)9.2e-0686.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF+IS+ARK+GIKLILSLVNNYEN+GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

A0A6J1FR05 Mannan endo-1,4-beta-mannosidase9.2e-0686.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF +S+ARK+GIKLILSLVNNYENMGGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

A0A6J1J0U5 Mannan endo-1,4-beta-mannosidase9.2e-0686.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF +S+ARK+GIKLILSLVNNYENMGGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

W9SN68 Mannan endo-1,4-beta-mannosidase9.2e-0683.33Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF++++ARKHGIKLILSLVNNYEN GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

SwissProt top hitse value%identityAlignment
Q0JKM9 Mannan endo-1,4-beta-mannosidase 11.2e-0566.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF++S+ARK+GIK+ILSLV+NY++ GG+
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

Q10B67 Mannan endo-1,4-beta-mannosidase 43.4e-0563.33Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF+I++AR+HGI L+L L NN++N GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

Q6YM50 Mannan endo-1,4-beta-mannosidase 58.9e-0670Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF+IS+A+K+GI+LILS VNNY + GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

Q9FJZ3 Mannan endo-1,4-beta-mannosidase 71.5e-0563.33Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF +++AR+HGIK+ILS  NNYE+ GG+
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

Q9FZ03 Mannan endo-1,4-beta-mannosidase 28.9e-0670Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF+IS+A+K+GI+LILS VNNY + GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

Arabidopsis top hitse value%identityAlignment
AT1G02310.1 Glycosyl hydrolase superfamily protein1.7e-0456.67Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF++ +A +  IKLI+SLVNN+E+ GG+
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

AT3G10890.1 Glycosyl hydrolase superfamily protein1.3e-0453.33Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF I++A++ GIK+I++ VNNY + GG+
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

AT3G10900.1 Glycosyl hydrolase superfamily protein4.5e-0560Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF+I++A++ GIKLI+ LVNN+++ GGK
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK

AT5G01930.1 Glycosyl hydrolase superfamily protein5.9e-0565.52Show/hide
Query:  LDFMISKARKHGIKLILSLVNNYENMGGK
        LDF++S+ARK+ I+LILSLVNN++  GGK
Subjt:  LDFMISKARKHGIKLILSLVNNYENMGGK

AT5G66460.1 Glycosyl hydrolase superfamily protein1.1e-0663.33Show/hide
Query:  GLDFMISKARKHGIKLILSLVNNYENMGGK
        GLDF +++AR+HGIK+ILS  NNYE+ GG+
Subjt:  GLDFMISKARKHGIKLILSLVNNYENMGGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGTTGGATTTTATGATATCGAAAGCAAGAAAACATGGGATTAAACTGATCCTGAGTTTGGTGAACAATTACGAAAATATGGGAGGGAAG
mRNA sequenceShow/hide mRNA sequence
GGGTTGGATTTTATGATATCGAAAGCAAGAAAACATGGGATTAAACTGATCCTGAGTTTGGTGAACAATTACGAAAATATGGGAGGGAAG
Protein sequenceShow/hide protein sequence
GLDFMISKARKHGIKLILSLVNNYENMGGK