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MS005439 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005439
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationscaffold641:182396..182500
RNA-Seq ExpressionMS005439
SyntenyMS005439
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGG82699.1 endo-1,4-beta-mannosidase [Morus alba var. multicaulis]8.4e-0577.14Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQR KVSSA QEA NHG+SI RTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
PON93416.1 1,4-alpha-glucan-branching enzyme [Trema orientale]8.4e-0577.14Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQR KVSSA QEA NHG+SI RTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
XP_004147857.3 mannan endo-1,4-beta-mannosidase 7 [Cucumis sativus]8.4e-0571.43Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQ  KVSSA Q+A+NHG+SIGRTWAF+DG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
XP_022132099.1 mannan endo-1,4-beta-mannosidase 7-like [Momordica charantia]9.0e-0782.86Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQRTKVSSA QEA+NHG+SIGRTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
XP_038897716.1 mannan endo-1,4-beta-mannosidase 7-like [Benincasa hispida]1.5e-0680Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQRTKVSSA Q+A+NHG+SIGRTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
TrEMBL top hitse value%identityAlignment
A0A0A0LDZ5 Mannan endo-1,4-beta-mannosidase4.1e-0571.43Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQ  KVSSA Q+A+NHG+SIGRTWAF+DG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
A0A5B7B161 Mannan endo-1,4-beta-mannosidase (Fragment)8.2e-0674.29Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQRTKVSSA QEA+NHG+ + RTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
A0A6J1BS42 Mannan endo-1,4-beta-mannosidase4.4e-0782.86Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQRTKVSSA QEA+NHG+SIGRTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
M4N902 Mannan endo-1,4-beta-mannosidase4.1e-0577.14Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQR KVSSA QEA NHG+SI RTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
W9ST09 Mannan endo-1,4-beta-mannosidase4.1e-0577.14Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQR KVSSA QEA NHG+SI RTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
SwissProt top hitse value%identityAlignment
Q0JKM9 Mannan endo-1,4-beta-mannosidase 12.0e-0460.61Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDG
        +++PSQR KVS+A  EA  HG+++ RTWAFSDG
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDG
Q9FJZ3 Mannan endo-1,4-beta-mannosidase 74.6e-0660Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQR+K+S+A Q+A  HG+++ RTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
Arabidopsis top hitse value%identityAlignment
AT5G66460.1 Glycosyl hydrolase superfamily protein3.3e-0760Show/hide
Query:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY
        +S+PSQR+K+S+A Q+A  HG+++ RTWAFSDG Y
Subjt:  SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTCAAACCCATCTCAGAGGACCAAAGTCTCCTCTGCCTCCCAAGAAGCGATAAATCATGGCATCTCCATCGGAAGAACTTGGGCCTTCAGCGATGGCAGATAT
mRNA sequenceShow/hide mRNA sequence
TCTTCAAACCCATCTCAGAGGACCAAAGTCTCCTCTGCCTCCCAAGAAGCGATAAATCATGGCATCTCCATCGGAAGAACTTGGGCCTTCAGCGATGGCAGATAT
Protein sequenceShow/hide protein sequence
SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY