; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005453 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005453
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFerredoxin
Genome locationscaffold641:342072..342948
RNA-Seq ExpressionMS005453
SyntenyMS005453
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606242.1 AP-2 complex subunit mu, partial [Cucurbita argyrosperma subsp. sororia]4.1e-6391.97Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K ESSR FLS NRNRRFSDLLKCRRKT STELQA +DVAGRTD+GSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

KAG7036183.1 hypothetical protein SDJN02_02984, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-6391.97Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K ESSR FLS NRNRRFSDLLKCRRKT STELQA +DVAGRTD+GSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

XP_022155937.1 uncharacterized protein LOC111022934 [Momordica charantia]1.1e-6898.54Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVNWKLE SRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

XP_022930965.1 uncharacterized protein LOC111437299 [Cucurbita moschata]4.1e-6391.97Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K ESSR FLS NRNRRFSDLLKCRRKT STELQA +DVAGRTD+GSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

XP_038888790.1 ferredoxin C 2, chloroplastic [Benincasa hispida]3.5e-6290.51Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS  SVN K ES R+FLS NRNRRFSD+LKCRRKTTSTELQAA+DVA RTD+GS SIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

TrEMBL top hitse value%identityAlignment
A0A6J1DQQ0 Ferredoxin5.4e-6998.54Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVNWKLE SRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

A0A6J1ESD7 Ferredoxin2.0e-6391.97Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K ESSR FLS NRNRRFSDLLKCRRKT STELQA +DVAGRTD+GSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

A0A6J1GKE0 Ferredoxin4.6e-6087.59Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K  S RRF+S NRN RFSD+LKCRRKTTS ELQAA+DVA +T+NGS SIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

A0A6J1I4R5 Ferredoxin3.5e-6087.59Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K  S RRF+S NRN RFSD+LKCRRKTTS ELQAA+DVA +TDNGS SIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELK+K
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

A0A6J1K5R4 Ferredoxin1.1e-6191.24Show/hide
Query:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLP TS RSVN K ESSR FLS NRNRRFSDLLKCR K  STELQAA+DVAGRTDNGSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

SwissProt top hitse value%identityAlignment
P00253 Ferredoxin4.6e-0944.26Show/hide
Query:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE +   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE

P0A3C7 Ferredoxin-12.1e-0945.9Show/hide
Query:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE

P0A3C8 Ferredoxin-12.1e-0945.9Show/hide
Query:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE

P15788 Ferredoxin3.5e-0944.26Show/hide
Query:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE
        ++KVT+ + + G+     VP+D+YIL  AE + I LP++CR G C++CA +IK GEI Q +
Subjt:  THKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE

Q9C7Y4 Ferredoxin C 2, chloroplastic6.2e-3857.86Show/hide
Query:  MDVLLP---CTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQ
        M ++LP   CTSL+  N+ +           NRR+    +    T + E +  ++V+  +D GS  +P+HKVTVHDRQRGVVHEF VPEDQYILH+AE+Q
Subjt:  MDVLLP---CTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQ

Query:  SISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        +ISLPFACRHGCCTSCAVR+KSGE+RQP+ALGISAELKS+
Subjt:  SISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 11.9e-0540.38Show/hide
Query:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        ED Y+L  AE   + LP++CR G C+SCA ++ SG I Q +   +  E  S+
Subjt:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein4.4e-3957.86Show/hide
Query:  MDVLLP---CTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQ
        M ++LP   CTSL+  N+ +           NRR+    +    T + E +  ++V+  +D GS  +P+HKVTVHDRQRGVVHEF VPEDQYILH+AE+Q
Subjt:  MDVLLP---CTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQ

Query:  SISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        +ISLPFACRHGCCTSCAVR+KSGE+RQP+ALGISAELKS+
Subjt:  SISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

AT1G32550.2 2Fe-2S ferredoxin-like superfamily protein2.0e-3656.43Show/hide
Query:  MDVLLP---CTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQ
        M ++LP   CTSL+  N+ +           NRR+    +    T + E +  ++V+  +D GS  +P+HKVTVHDRQRGVVHEF   EDQYILH+AE+Q
Subjt:  MDVLLP---CTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQ

Query:  SISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK
        +ISLPFACRHGCCTSCAVR+KSGE+RQP+ALGISAELKS+
Subjt:  SISLPFACRHGCCTSCAVRIKSGEIRQPEALGISAELKSK

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein4.2e-0543.9Show/hide
Query:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE
        +D Y+L  AE   I LP++CR G C+SCA ++ SG + Q +
Subjt:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE

AT2G27510.1 ferredoxin 33.4e-0746Show/hide
Query:  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE
        G   EF V +DQYIL  AE   + LP++CR G C++CA +I SG + Q +
Subjt:  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGEIRQPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTCTCCTTCCCTGCACCTCCCTCCGTTCAGTAAATTGGAAGTTGGAATCCTCTCGGAGATTCCTCTCGCCAAATCGGAACCGTCGCTTTTCCGACCTCTTGAA
ATGCCGCCGAAAAACGACGTCGACTGAGCTCCAGGCAGCTATCGATGTCGCCGGCCGGACCGACAACGGTTCTGCTTCAATTCCGACTCATAAGGTCACCGTTCACGACA
GACAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCTTTTGCTTGCAGGCACGGTTGTTGC
ACTAGTTGTGCTGTTCGAATAAAATCAGGCGAAATTAGACAGCCTGAAGCCCTTGGAATATCTGCTGAGCTGAAATCAAAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTCTCCTTCCCTGCACCTCCCTCCGTTCAGTAAATTGGAAGTTGGAATCCTCTCGGAGATTCCTCTCGCCAAATCGGAACCGTCGCTTTTCCGACCTCTTGAA
ATGCCGCCGAAAAACGACGTCGACTGAGCTCCAGGCAGCTATCGATGTCGCCGGCCGGACCGACAACGGTTCTGCTTCAATTCCGACTCATAAGGTCACCGTTCACGACA
GACAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCTTTTGCTTGCAGGCACGGTTGTTGC
ACTAGTTGTGCTGTTCGAATAAAATCAGGCGAAATTAGACAGCCTGAAGCCCTTGGAATATCTGCTGAGCTGAAATCAAAG
Protein sequenceShow/hide protein sequence
MDVLLPCTSLRSVNWKLESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNGSASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCC
TSCAVRIKSGEIRQPEALGISAELKSK