CuGenDBv2

Gene ID	MS005454
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Late embryoproteinsis abundant group 1 domain-containing family protein
Genome location	scaffold641:344812..346777
RNA-Seq Expression	MS005454
Synteny	MS005454
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038590.1 uncharacterized protein E6C27_scaffold92G001200 [Cucumis melo var. makuwa]

4.5e-66

82.12

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+KNED+DVDSD    +RVHMQ TGLPRRGFSVPVQVAVNR  PGPIL+PSSSGDGGVQGL WYA  LR+DEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQG
        +EV+PE+ TSTTDHPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQG
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQG

XP_004148488.1 uncharacterized protein LOC101221247 [Cucumis sativus]

5.3e-67

81.7

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+KNED+DVDSD  P +RVHMQ TGLPRRGF VPVQVAVNR  PGPIL+PSSSGDGGVQGL WYA  LR+DEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL
        +EV+PE+ TSTT+HPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQGRL
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL

XP_008465957.1 PREDICTED: uncharacterized protein LOC103503527 [Cucumis melo]

4.1e-67

82.35

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+KNED+DVDSD    +RVHMQ TGLPRRGFSVPVQVAVNR  PGPIL+PSSSGDGGVQGL WYA  LR+DEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL
        +EV+PE+ TSTTDHPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQGRL
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL

XP_022155947.1 uncharacterized protein LOC111022940 [Momordica charantia]

2.6e-82

98.72

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF RRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRLQWV
        DEVLPE+PTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRLQWV
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRLQWV

XP_038886945.1 uncharacterized protein LOC120077122 [Benincasa hispida]

2.6e-66

81.7

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+K+ED+DVDSDN   +RVHM  TGLPRRGFSVPVQVAVNR  PGPIL PS+SGDGGVQGL WYA RLRVDEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL
        +EV+PE+ TSTTDHPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQG+L
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LF42 Uncharacterized protein

2.6e-67

81.7

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+KNED+DVDSD  P +RVHMQ TGLPRRGF VPVQVAVNR  PGPIL+PSSSGDGGVQGL WYA  LR+DEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL
        +EV+PE+ TSTT+HPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQGRL
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL

A0A1S3CRI6 uncharacterized protein LOC103503527

2.0e-67

82.35

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+KNED+DVDSD    +RVHMQ TGLPRRGFSVPVQVAVNR  PGPIL+PSSSGDGGVQGL WYA  LR+DEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL
        +EV+PE+ TSTTDHPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQGRL
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL

A0A5A7T5L6 Uncharacterized protein

2.2e-66

82.12

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+KNED+DVDSD    +RVHMQ TGLPRRGFSVPVQVAVNR  PGPIL+PSSSGDGGVQGL WYA  LR+DEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQG
        +EV+PE+ TSTTDHPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQG
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQG

A0A5D3E6C0 Uncharacterized protein

1.4e-65

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF R+IAGILGF+KDDSHD+KNED+DVDSD    +RVHMQ TGLPRRGFSVPVQVAVNR  PGPIL+PSSSGDGGVQGL WYA  LR+DEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQ
        +EV+PE+ TSTTDHPK FPRFQ+N+RNRPAKVENQVIL+EGKLQQCI+HQ
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQ

A0A6J1DQR1 uncharacterized protein LOC111022940

1.3e-82

98.72

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        MRF RRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRLQWV
        DEVLPE+PTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRLQWV
Subjt:  DEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRLQWV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G17960.1 unknown protein

7.7e-40

51.61

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Query:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL
        M F +++AG+ GF ++    LKNE++D+D      N+   +ETGLPR+GF VPVQVAV R Q GP+L P ++GDGG+QGL+WY  RLRVDEDGDVA++FL
Subjt:  MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFL

Query:  DEVLPEIPTSTTDHP--KSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL
        +E   +   +  DH   K+ PRFQ+  + +P KV   V+  +GKLQQCI+HQGRL
Subjt:  DEVLPEIPTSTTDHP--KSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRL

AT5G46620.1 unknown protein

1.6e-24

42.14

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Query:  MRFLRRIAGILGFAKDDSHD----LKNEDEDVDSDN-----------QPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYAN
        M FL+++ GILGF  +D       +++ED D   +N           +  N+   +ETG PR+GF VPVQVAV R  PGPIL P ++ DGGVQGL+WY+ 
Subjt:  MRFLRRIAGILGFAKDDSHD----LKNEDEDVDSDN-----------QPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYAN

Query:  RLRVDEDGDVAEQFLDEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQ
        RL++DEDGDVA++FL++           + K+ PR     + + AKV   VI  +GKLQ
Subjt:  RLRVDEDGDVAEQFLDEVLPEIPTSTTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQ

Sequences

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CDS sequence

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ATGCGCTTCTTGAGGAGGATTGCAGGAATTCTAGGGTTTGCCAAGGACGATTCTCATGACCTCAAGAACGAAGACGAAGATGTTGATTCTGATAACCAGCCTTCCAATCG
GGTTCATATGCAGGAAACTGGTCTTCCTCGGAGGGGCTTCAGCGTTCCGGTCCAGGTCGCTGTTAATCGGCCGCAGCCCGGCCCTATTCTTGTTCCCTCTAGTTCCGGCG
ATGGTGGAGTTCAGGGTTTGAAATGGTATGCTAATCGTCTCCGGGTTGATGAAGATGGAGATGTAGCTGAACAGTTCCTCGATGAAGTCTTACCTGAGATTCCAACCAGT
ACTACAGACCACCCCAAGTCATTTCCAAGATTTCAGGTGAATAGTAGAAATAGGCCAGCCAAAGTAGAGAACCAGGTTATATTGCAGGAGGGTAAACTTCAACAGTGTAT
TAAACATCAAGGTAGATTGCAATGGGTA

mRNA sequence

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Protein sequence

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MRFLRRIAGILGFAKDDSHDLKNEDEDVDSDNQPSNRVHMQETGLPRRGFSVPVQVAVNRPQPGPILVPSSSGDGGVQGLKWYANRLRVDEDGDVAEQFLDEVLPEIPTS
TTDHPKSFPRFQVNSRNRPAKVENQVILQEGKLQQCIKHQGRLQWV

MS005454 (gene) of Bitter gourd (TR) v1 genome