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MS005469 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005469
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR9-like
Genome locationscaffold1030:100393..100770
RNA-Seq ExpressionMS005469
SyntenyMS005469
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590203.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2258.73Show/hide
Query:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELA-SSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSN
        MASKGG  R K K + K + K  Q++KK            +  E E +  +A ++ AAM E+ S SSD EEC TPKAERFRIPEIKICPPAPKKQRI SN
Subjt:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELA-SSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSN

Query:  CSNLQRPSPIAFFASPDIELFFFFSS
        CS+ Q+PSPI+FFASPDIE+FFF SS
Subjt:  CSNLQRPSPIAFFASPDIELFFFFSS

KAG7022087.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1753.79Show/hide
Query:  MASKGGIAR------TKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQ
        MASKGG  R        +K +KK  K S     +R         K +E E E A   +SS+ A  + ++ SSD E C TPKA+RF+IPEI+ICPPAPKKQ
Subjt:  MASKGGIAR------TKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQ

Query:  RIFSNCSNLQRPSPIAFFASPDIELFFFFSSS
        R  SNCS LQ+ SPIAFFASPDIELFFFFS S
Subjt:  RIFSNCSNLQRPSPIAFFASPDIELFFFFSSS

KGN66487.1 hypothetical protein Csa_006949 [Cucumis sativus]5.0e-1549.24Show/hide
Query:  MASKGGIARTKMK--MSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENE-SMSSDLEECC-TPKAERFRIPEIKICPPAPKKQRI
        MASK G AR + +   + ++K K  ++  K N          + T + T +     S +    +     + EECC TPKAERF+IPEIKICPPAPKK+R+
Subjt:  MASKGGIARTKMK--MSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENE-SMSSDLEECC-TPKAERFRIPEIKICPPAPKKQRI

Query:  FSNCS---NLQRPSPIAFFASPDIELFFFFSS
        FSN +   +LQRPSPIAFFASPDIELFFFFSS
Subjt:  FSNCS---NLQRPSPIAFFASPDIELFFFFSS

XP_022154348.1 cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]9.6e-59100Show/hide
Query:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC
        MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC
Subjt:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC

Query:  SNLQRPSPIAFFASPDIELFFFFSSS
        SNLQRPSPIAFFASPDIELFFFFSSS
Subjt:  SNLQRPSPIAFFASPDIELFFFFSSS

XP_023530358.1 cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]4.1e-1752.27Show/hide
Query:  MASKGGIAR------TKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQ
        MASKGG  R        +K +KK  K S     +R              E E A   +SS+ A  + ++ SSD E C TPKA+RF+IPEI+ICPPAPKKQ
Subjt:  MASKGGIAR------TKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQ

Query:  RIFSNCSNLQRPSPIAFFASPDIELFFFFSSS
        R  SNCS LQ+ SPIAFFASPDIELFFFFS S
Subjt:  RIFSNCSNLQRPSPIAFFASPDIELFFFFSSS

TrEMBL top hitse value%identityAlignment
A0A0A0M041 Uncharacterized protein2.4e-1549.24Show/hide
Query:  MASKGGIARTKMK--MSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENE-SMSSDLEECC-TPKAERFRIPEIKICPPAPKKQRI
        MASK G AR + +   + ++K K  ++  K N          + T + T +     S +    +     + EECC TPKAERF+IPEIKICPPAPKK+R+
Subjt:  MASKGGIARTKMK--MSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENE-SMSSDLEECC-TPKAERFRIPEIKICPPAPKKQRI

Query:  FSNCS---NLQRPSPIAFFASPDIELFFFFSS
        FSN +   +LQRPSPIAFFASPDIELFFFFSS
Subjt:  FSNCS---NLQRPSPIAFFASPDIELFFFFSS

A0A5B7C7L8 Uncharacterized protein6.0e-1454.84Show/hide
Query:  PPKNQETETETAVELASSSAAMAENESMSSDLEE-----CCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFS
        P + Q    ET+V+L   S +   +  M S++ +     C TPKA+RFRIPEI  CPPAPKK+R+ SNCS LQR +PIAFFA PDIELFFFF+
Subjt:  PPKNQETETETAVELASSSAAMAENESMSSDLEE-----CCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFS

A0A6A1UIU7 Uncharacterized protein2.7e-1456.84Show/hide
Query:  KNQET-ETETAVELASSSAAMAEN--------ESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFS
        KNQET  +  +   A SS  +++N        E++ S    C TPKA+RFRIPEI  CPPAPKKQR+ SNCS LQR SPIAFFA PD+ELFFFF+
Subjt:  KNQET-ETETAVELASSSAAMAEN--------ESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFS

A0A6J1DK32 cyclin-dependent protein kinase inhibitor SMR9-like4.7e-59100Show/hide
Query:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC
        MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC
Subjt:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC

Query:  SNLQRPSPIAFFASPDIELFFFFSSS
        SNLQRPSPIAFFASPDIELFFFFSSS
Subjt:  SNLQRPSPIAFFASPDIELFFFFSSS

A0A7J7DRJ7 Uncharacterized protein3.5e-1457.65Show/hide
Query:  NQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFS
        N + ET + V+ +  S   A +       + C TPKAERFRIPEI  CPPAPKKQR+ +NCS+LQR +PIAFFA PDIELFFFF+
Subjt:  NQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFS

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR131.0e-0740.19Show/hide
Query:  SKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS
        SKK +K +    K          P++    T T   + S S A     ++ +    CCTPKA++ RIPE+  CPPAPKKQR+  NC  + R   I FFA 
Subjt:  SKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS

Query:  PDIELFF
        P+IELFF
Subjt:  PDIELFF

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR95.6e-0940.32Show/hide
Query:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC
        MASKG          K +++ + +R K+ +   PSPP       T T+    S+S       S  S    CCTP  E+ RIPE+  CPPAPKKQ++  NC
Subjt:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC

Query:  SNLQRPSPIAFFASPDIELFFFFS
        +  +R   IAFFA PD+ELFF F+
Subjt:  SNLQRPSPIAFFASPDIELFFFFS

Arabidopsis top hitse value%identityAlignment
AT1G51355.1 unknown protein3.9e-1040.32Show/hide
Query:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC
        MASKG          K +++ + +R K+ +   PSPP       T T+    S+S       S  S    CCTP  E+ RIPE+  CPPAPKKQ++  NC
Subjt:  MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNC

Query:  SNLQRPSPIAFFASPDIELFFFFS
        +  +R   IAFFA PD+ELFF F+
Subjt:  SNLQRPSPIAFFASPDIELFFFFS

AT1G60783.1 unknown protein4.2e-0432.93Show/hide
Query:  TETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFSSS
        T   + L+SS+ +  E+E +        TP A+  RIP +  CPPAPKK+++    S      P  FF+ PD+E  F + ++
Subjt:  TETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFASPDIELFFFFSSS

AT3G20898.1 unknown protein7.4e-0940.19Show/hide
Query:  SKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS
        SKK +K +    K          P++    T T   + S S A     ++ +    CCTPKA++ RIPE+  CPPAPKKQR+  NC  + R   I FFA 
Subjt:  SKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS

Query:  PDIELFF
        P+IELFF
Subjt:  PDIELFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAAGGAGGAATAGCAAGAACAAAGATGAAGATGAGCAAGAAGATCAAGAAGAAGAGCCCACAGAGGATGAAGAAGAGAAATCCTCCTCCTCCTTCTCCTCC
TCCAAAGAATCAGGAAACCGAAACCGAAACCGCAGTCGAATTAGCTTCAAGCTCAGCAGCCATGGCGGAAAATGAGAGCATGAGCAGTGATTTGGAAGAGTGCTGCACTC
CAAAAGCAGAGAGATTCAGAATCCCAGAGATCAAAATCTGCCCTCCAGCTCCAAAAAAACAGAGGATTTTCTCCAATTGTTCTAATTTACAGAGACCTTCTCCAATTGCC
TTCTTTGCTTCTCCAGATATAGAGCTCTTCTTCTTCTTCTCCTCCTCA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAAGGAGGAATAGCAAGAACAAAGATGAAGATGAGCAAGAAGATCAAGAAGAAGAGCCCACAGAGGATGAAGAAGAGAAATCCTCCTCCTCCTTCTCCTCC
TCCAAAGAATCAGGAAACCGAAACCGAAACCGCAGTCGAATTAGCTTCAAGCTCAGCAGCCATGGCGGAAAATGAGAGCATGAGCAGTGATTTGGAAGAGTGCTGCACTC
CAAAAGCAGAGAGATTCAGAATCCCAGAGATCAAAATCTGCCCTCCAGCTCCAAAAAAACAGAGGATTTTCTCCAATTGTTCTAATTTACAGAGACCTTCTCCAATTGCC
TTCTTTGCTTCTCCAGATATAGAGCTCTTCTTCTTCTTCTCCTCCTCA
Protein sequenceShow/hide protein sequence
MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIA
FFASPDIELFFFFSSS