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MS005474 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005474
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein
Genome locationscaffold1030:152604..152746
RNA-Seq ExpressionMS005474
SyntenyMS005474
Gene Ontology termsGO:0008284 - positive regulation of cell population proliferation (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570927.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0761.7Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK + G+LSRCNY+ VIL+ CL A  Y  HGKM IWVM++YG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

XP_022140713.1 F-box protein At3g07870 [Momordica charantia]1.3e-0870.21Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        EIPK E G+LSRCNY+ VILD CL A AY ++GKM IWVMKEYG  E
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

XP_022944698.1 F-box protein At3g07870-like [Cucurbita moschata]3.1e-0761.7Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK + G+LSRCNY+ VIL+ CL A  Y  HGKM IWVM++YG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

XP_023511779.1 F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]3.1e-0761.7Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK + G+LSRCNY+ VIL+ CL A  Y  HGKM IWVM++YG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

XP_038901410.1 F-box protein At3g07870 [Benincasa hispida]2.2e-0863.83Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK + G+LSRCNY+ VIL++CL A  Y +HGKM IWVMK+YG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

TrEMBL top hitse value%identityAlignment
A0A6J1CIM5 F-box protein At3g078706.1e-0970.21Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        EIPK E G+LSRCNY+ VILD CL A AY ++GKM IWVMKEYG  E
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

A0A6J1FYB5 F-box protein At3g07870-like1.5e-0761.7Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK + G+LSRCNY+ VIL+ CL A  Y  HGKM IWVM++YG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

A0A6J1G896 F-box protein At3g07870-like7.5e-0763.83Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK +LG+LSR NY+ VIL+ CL A  Y  +GKM IWVMKEYG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

A0A6J1I5M3 F-box protein At3g078707.5e-0763.83Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK +LG+LSR NY+ VIL+ CL A  Y  +GKM IWVMKEYG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

A0A6J1J905 F-box protein At3g07870-like2.0e-0759.57Show/hide
Query:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE
        +IPK + G+LSRCNY+ VIL+ CL A  Y  HGKM IW+M++YG KE
Subjt:  EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKM-IWVMKEYGAKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATTCCAAAGTCGGAATTGGGGACATTGAGCAGATGCAATTACAATTCGGTGATTCTTGACGAGTGCCTCTTCGCCGTGGCCTACTACAACCACGGGAAAATGATATG
GGTGATGAAAGAGTACGGGGCGAAAGAA
mRNA sequenceShow/hide mRNA sequence
GAAATTCCAAAGTCGGAATTGGGGACATTGAGCAGATGCAATTACAATTCGGTGATTCTTGACGAGTGCCTCTTCGCCGTGGCCTACTACAACCACGGGAAAATGATATG
GGTGATGAAAGAGTACGGGGCGAAAGAA
Protein sequenceShow/hide protein sequence
EIPKSELGTLSRCNYNSVILDECLFAVAYYNHGKMIWVMKEYGAKE