; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005480 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005480
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolyprotein
Genome locationscaffold1030:197593..198327
RNA-Seq ExpressionMS005480
SyntenyMS005480
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]5.1e-6472.25Show/hide
Query:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP     +++R  TM N+G++QIGVKTLT KI SNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

KAG6588194.1 hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6253.85Show/hide
Query:  FSTPCWISNIGGGS--HALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLL
        F  PCW S   GG   HALD EEFIKKGNNLLNWKIPKVPT+KIYK   F F SDPSIKT + +++CGNG+QA  LI ++PF   L+ +R Y+MFNVG++
Subjt:  FSTPCWISNIGGGS--HALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLL

Query:  QIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSA
        QIG KTLTKKIP NA+I LCV DTR EK EDSILG+VEA L                                         T+PI +  RTCYK Q SA
Subjt:  QIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSA

Query:  APDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKFIDSCAAE
          +AL+ES  G+TVFFQTDFENS+VAV KVS WD+V+ K +D   +E
Subjt:  APDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKFIDSCAAE

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]4.1e-9069.07Show/hide
Query:  STPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIG
        ST CW SN GGGSH+LD+EE+IKKG NLL WKIPK+PTTKIYK   F FFSDP IKT E  + C NGSQ FRLI+ NP  D  +++R YT  N+G++QIG
Subjt:  STPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIG

Query:  VKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPD
        VKTLT KIPSNASIILCV DTR +  EDSILG+VE+ L DGP++FNIFPNITM +FHPKL ++ VL  +V+GFEQLP GT PIS+M RTCYK Q SA P 
Subjt:  VKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPD

Query:  ALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        AL+ESPQGKTVFFQT+FENS VA QKVS+WDEV+ K
Subjt:  ALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

TYK18873.1 polyprotein [Cucumis melo var. makuwa]6.0e-6572.83Show/hide
Query:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP     +++R  TM N+G++QIGVKTLT KIPSNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]8.4e-7564.1Show/hide
Query:  PCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVK
        PC  SN GGGSHALD+EE+IKKGNNLL WKIPKVPTTKIYK+  FTFFSDPSIKT E K+SC NGSQAFRLIA+NP      D R YT  NVG++QIGVK
Subjt:  PCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVK

Query:  TLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDAL
         +T KIPSNASIILCV D+R E  ED+ILG+VE++L                                 GFEQLP GT+PIS+M RTCYK Q SA P+AL
Subjt:  TLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDAL

Query:  LESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LESPQGKTV+FQTD +NS VAVQKVSKWDEVV K
Subjt:  LESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein2.3e-5448.93Show/hide
Query:  GSHALDTEEFIKKGNNLLNWKIPKVPTTKIY---KKKSFTFF---SDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRL--YTMFNVGLLQIGVKT
        G H+L+ EE+++KG +L+ WK+P+VP  KIY   +K  F  F   +DPSI+T EG++S GN   +F+L  Q P     + RR+  +   N+GL+QIGVKT
Subjt:  GSHALDTEEFIKKGNNLLNWKIPKVPTTKIY---KKKSFTFF---SDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRL--YTMFNVGLLQIGVKT

Query:  LTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKF-QGSAAPDAL
        LTKKIP NASIILC+ D R EKLEDS+L +VE+ L DGP YFN+FPNI +S+F   +++ L ++V+V+G +++P G+ PI V  RTCYK  Q     +AL
Subjt:  LTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKF-QGSAAPDAL

Query:  LESPQGKTVFFQTDF--ENSNVAVQKVSKWDEV
        +ESP GKTVFFQ +   ++ +  VQKV+ W++V
Subjt:  LESPQGKTVFFQTDF--ENSNVAVQKVSKWDEV

A0A0A0LZS0 Uncharacterized protein2.0e-9069.07Show/hide
Query:  STPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIG
        ST CW SN GGGSH+LD+EE+IKKG NLL WKIPK+PTTKIYK   F FFSDP IKT E  + C NGSQ FRLI+ NP  D  +++R YT  N+G++QIG
Subjt:  STPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIG

Query:  VKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPD
        VKTLT KIPSNASIILCV DTR +  EDSILG+VE+ L DGP++FNIFPNITM +FHPKL ++ VL  +V+GFEQLP GT PIS+M RTCYK Q SA P 
Subjt:  VKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPD

Query:  ALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        AL+ESPQGKTVFFQT+FENS VA QKVS+WDEV+ K
Subjt:  ALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

A0A5A7U9X3 Polyprotein2.5e-6472.25Show/hide
Query:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP     +++R  TM N+G++QIGVKTLT KI SNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

A0A5D3D5V1 Polyprotein2.9e-6572.83Show/hide
Query:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP     +++R  TM N+G++QIGVKTLT KIPSNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

A5AFI5 Uncharacterized protein1.2e-2935.71Show/hide
Query:  HALDTEE--FIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSN
        + +++EE  + K  N+L +WK+PKV   +IYKK +F FF+D +IKT E  VS     Q  RL+         KD   Y   + G++Q+  K LT ++  N
Subjt:  HALDTEE--FIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSN

Query:  ASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYK-FQGSAAPDALLESPQGKT
          I++C+ D R  +  DSI+G V+A L DGP+YF  +PN T+ +    + D++VL++   GF+  P G  P+S+++R  YK    S    AL  SP+G+T
Subjt:  ASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYK-FQGSAAPDALLESPQGKT

Query:  VFFQTD-FENSNVAVQKVSKWDEV
         +F +D  + S+  + K   W +V
Subjt:  VFFQTD-FENSNVAVQKVSKWDEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTCCACACCCTGTTGGATCTCAAACATTGGAGGAGGAAGCCATGCTCTGGACACAGAAGAATTCATCAAAAAGGGGAACAATCTATTGAACTGGAAAATCCCCAAGGT
ACCCACAACCAAAATCTACAAAAAAAAGTCCTTCACTTTCTTCTCTGATCCCTCCATAAAAACCATAGAAGGGAAAGTCTCTTGTGGAAATGGCAGCCAAGCCTTCAGAT
TGATAGCTCAAAATCCCTTCTTTGATGGCCTAAAGGACAGGAGACTCTACACCATGTTCAATGTGGGGCTGCTCCAAATTGGGGTCAAAACTTTAACCAAAAAAATTCCC
TCAAATGCCTCAATTATTCTCTGTGTTTGTGACACTCGCTGTGAGAAGCTTGAAGATTCGATTTTGGGAGTGGTGGAAGCTAGTCTAAGGGATGGCCCTTTGTATTTCAA
CATATTTCCAAACATTACCATGTCTGTGTTTCATCCCAAGTTGTCGGATGCTTTGGTTTTGAATGTCATTGTCGAGGGTTTTGAGCAGCTCCCTGTGGGGACACAGCCCA
TTAGTGTAATGTCTAGGACTTGTTATAAGTTTCAAGGGAGTGCAGCTCCTGATGCCCTTCTTGAGAGCCCACAAGGGAAAACTGTGTTTTTTCAGACAGATTTTGAGAAC
TCCAATGTTGCTGTTCAGAAGGTCTCAAAATGGGATGAAGTTGTCCAAAAATTCATCGACTCTTGTGCTGCAGAG
mRNA sequenceShow/hide mRNA sequence
TTTTCCACACCCTGTTGGATCTCAAACATTGGAGGAGGAAGCCATGCTCTGGACACAGAAGAATTCATCAAAAAGGGGAACAATCTATTGAACTGGAAAATCCCCAAGGT
ACCCACAACCAAAATCTACAAAAAAAAGTCCTTCACTTTCTTCTCTGATCCCTCCATAAAAACCATAGAAGGGAAAGTCTCTTGTGGAAATGGCAGCCAAGCCTTCAGAT
TGATAGCTCAAAATCCCTTCTTTGATGGCCTAAAGGACAGGAGACTCTACACCATGTTCAATGTGGGGCTGCTCCAAATTGGGGTCAAAACTTTAACCAAAAAAATTCCC
TCAAATGCCTCAATTATTCTCTGTGTTTGTGACACTCGCTGTGAGAAGCTTGAAGATTCGATTTTGGGAGTGGTGGAAGCTAGTCTAAGGGATGGCCCTTTGTATTTCAA
CATATTTCCAAACATTACCATGTCTGTGTTTCATCCCAAGTTGTCGGATGCTTTGGTTTTGAATGTCATTGTCGAGGGTTTTGAGCAGCTCCCTGTGGGGACACAGCCCA
TTAGTGTAATGTCTAGGACTTGTTATAAGTTTCAAGGGAGTGCAGCTCCTGATGCCCTTCTTGAGAGCCCACAAGGGAAAACTGTGTTTTTTCAGACAGATTTTGAGAAC
TCCAATGTTGCTGTTCAGAAGGTCTCAAAATGGGATGAAGTTGTCCAAAAATTCATCGACTCTTGTGCTGCAGAG
Protein sequenceShow/hide protein sequence
FSTPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTFFSDPSIKTIEGKVSCGNGSQAFRLIAQNPFFDGLKDRRLYTMFNVGLLQIGVKTLTKKIP
SNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFEN
SNVAVQKVSKWDEVVQKFIDSCAAE