; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005489 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005489
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionubiquitin-conjugating enzyme E2 20-like
Genome locationscaffold1030:302501..303165
RNA-Seq ExpressionMS005489
SyntenyMS005489
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0030071 - regulation of mitotic metaphase/anaphase transition (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR023313 - Ubiquitin-conjugating enzyme, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3454271.1 hypothetical protein FNV43_RR04718 [Rhamnella rubrinervis]4.0e-6388.64Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI+GSKDTVFEGT+YRLSL+FPN+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRTVL+SIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLW+NQ+EYRKMVEKLYKAPTA
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

XP_007015153.2 PREDICTED: ubiquitin-conjugating enzyme E2 20 [Theobroma cacao]1.0e-6390.15Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI+GSKDTVFEGTEYRLSLAFPN+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLWSNQ+EYRKMVEKLYKAP A
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

XP_015873839.1 ubiquitin-conjugating enzyme E2 20 [Ziziphus jujuba]4.0e-6389.39Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI GSKDTVFEGTEYRLSL+FPN+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRTVL+SIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLW+NQ+EYRKMVEKLYKAPTA
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

XP_021279028.1 ubiquitin-conjugating enzyme E2 20 [Herrania umbratica]1.0e-6390.15Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI+GSKDTVFEGTEYRLSLAFPN+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLWSNQ+EYRKMVEKLYKAP A
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

XP_022154314.1 ubiquitin-conjugating enzyme E2 20-like [Momordica charantia]9.8e-7099.24Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEEGNIFYWK TISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

TrEMBL top hitse value%identityAlignment
A0A061GTP8 Ubiquitin-conjugating enzyme19 isoform 15.1e-6490.15Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI+GSKDTVFEGTEYRLSLAFPN+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLWSNQ+EYRKMVEKLYKAP A
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

A0A6J0ZWF3 ubiquitin-conjugating enzyme E2 205.1e-6490.15Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI+GSKDTVFEGTEYRLSLAFPN+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLWSNQ+EYRKMVEKLYKAP A
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

A0A6J1DLP7 ubiquitin-conjugating enzyme E2 20-like4.7e-7099.24Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEEGNIFYWK TISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

A0A6J1JFS1 ubiquitin-conjugating enzyme E2 20-like2.5e-6389.39Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI+GSKDTVFEGTEYRLS +FPN+YPFKPPKVKFET CFHPNVDI GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLWSNQ+EYRKMVEKLYK PTA
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

A0A6P3Z7R4 ubiquitin-conjugating enzyme E2 201.9e-6389.39Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGDSGISAFPEE NIF WK TI GSKDTVFEGTEYRLSL+FPN+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRTVL+SIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLW+NQ+EYRKMVEKLYKAPTA
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

SwissProt top hitse value%identityAlignment
Q54XS6 Probable ubiquitin-conjugating enzyme E2 C1.7e-4562.88Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        M    GISAFP+  NIF W  TI G+KDTV+E  E+++SL FP +YP+KPP VKFET CFHPNVD  GNICLDIL+DKW+  Y+VR++L+SIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
          SPLN+ AA LWSNQ EY+K+++K Y+  T+
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

Q8L7T3 Ubiquitin-conjugating enzyme E2 207.1e-6385.61Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        M G  GISAFPEE NIF WK TI+GSKDTVFEGTEYRLSL+F N+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLWSNQ+EYRKMVEKLYK P+A
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

Q95044 Ubiquitin-conjugating enzyme E2 C4.6e-4663.28Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        MSGD GI+AFP+  N+F W  T+ G KDTV+E  +Y+L+L FP++YP+KPP VKF T C+HPNVD  GNICLDIL++ WT++YDVRT+LLS+QSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK
         +SPLN QAA +WSNQ EY+K++ + YK
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK

Q9LJZ5 Ubiquitin-conjugating enzyme E2 193.9e-6186.72Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        M  D GISAFPEE NIF WK TI+GSKDTVFEGTEYRLSL F N+YPFK PKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK
        ISSPLNNQAAQLWSNQ+EYRKMVEKLYK
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK

Q9VTY6 Ubiquitin-conjugating enzyme E2 C7.3e-4463.28Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        M+ + GISAFP+  NIF W  TI+G ++TV+ G  YRLSL FPN YP+  P VKF TSCFHPNVD+ G ICLDIL+DKW++ YDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK
          SPLN QAA +W++QKEY+K ++  Y+
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK

Arabidopsis top hitse value%identityAlignment
AT1G14400.1 ubiquitin carrier protein 15.2e-2947.2Show/hide
Query:  QMSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEP
        Q    +GIS  P++ NI  W   I G  DT ++G  ++LSL F  +YP KPP V+F +  FHPN+   G+ICLDILQ++W+  YDV  +L SIQSLL +P
Subjt:  QMSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEP

Query:  NISSPLNNQAAQLWSNQK-EYRKMV
        N +SP N++AA+++S  K EY + V
Subjt:  NISSPLNNQAAQLWSNQK-EYRKMV

AT1G14400.2 ubiquitin carrier protein 15.2e-2947.2Show/hide
Query:  QMSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEP
        Q    +GIS  P++ NI  W   I G  DT ++G  ++LSL F  +YP KPP V+F +  FHPN+   G+ICLDILQ++W+  YDV  +L SIQSLL +P
Subjt:  QMSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEP

Query:  NISSPLNNQAAQLWSNQK-EYRKMV
        N +SP N++AA+++S  K EY + V
Subjt:  NISSPLNNQAAQLWSNQK-EYRKMV

AT1G50490.1 ubiquitin-conjugating enzyme 205.0e-6485.61Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        M G  GISAFPEE NIF WK TI+GSKDTVFEGTEYRLSL+F N+YPFKPPKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA
        ISSPLN QAAQLWSNQ+EYRKMVEKLYK P+A
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYKAPTA

AT3G20060.1 ubiquitin-conjugating enzyme192.8e-6286.72Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        M  D GISAFPEE NIF WK TI+GSKDTVFEGTEYRLSL F N+YPFK PKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK
        ISSPLNNQAAQLWSNQ+EYRKMVEKLYK
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK

AT3G20060.2 ubiquitin-conjugating enzyme192.8e-6286.72Show/hide
Query:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN
        M  D GISAFPEE NIF WK TI+GSKDTVFEGTEYRLSL F N+YPFK PKVKFET CFHPNVD+ GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPN
Subjt:  MSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPN

Query:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK
        ISSPLNNQAAQLWSNQ+EYRKMVEKLYK
Subjt:  ISSPLNNQAAQLWSNQKEYRKMVEKLYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGATGAGTGGGGATTCGGGTATTTCGGCTTTTCCTGAAGAAGGCAACATTTTCTACTGGAAAGAGACGATCAGTGGGAGTAAAGATACAGTGTTTGAAGGGACTGAGTA
TAGATTGTCCTTGGCGTTTCCCAATGAGTATCCCTTTAAGCCACCAAAAGTCAAGTTTGAAACCTCCTGCTTTCATCCCAATGTGGACATCCTTGGCAATATCTGCTTGG
ACATTCTTCAGGATAAATGGACTTCTGCTTATGATGTCAGAACTGTCTTGTTATCTATTCAGAGCCTGCTTGGAGAACCAAACATAAGCTCCCCTCTGAATAACCAGGCA
GCTCAACTTTGGAGCAACCAGAAAGAATATAGGAAGATGGTGGAGAAACTGTACAAGGCACCAACAGCT
mRNA sequenceShow/hide mRNA sequence
CAGATGAGTGGGGATTCGGGTATTTCGGCTTTTCCTGAAGAAGGCAACATTTTCTACTGGAAAGAGACGATCAGTGGGAGTAAAGATACAGTGTTTGAAGGGACTGAGTA
TAGATTGTCCTTGGCGTTTCCCAATGAGTATCCCTTTAAGCCACCAAAAGTCAAGTTTGAAACCTCCTGCTTTCATCCCAATGTGGACATCCTTGGCAATATCTGCTTGG
ACATTCTTCAGGATAAATGGACTTCTGCTTATGATGTCAGAACTGTCTTGTTATCTATTCAGAGCCTGCTTGGAGAACCAAACATAAGCTCCCCTCTGAATAACCAGGCA
GCTCAACTTTGGAGCAACCAGAAAGAATATAGGAAGATGGTGGAGAAACTGTACAAGGCACCAACAGCT
Protein sequenceShow/hide protein sequence
QMSGDSGISAFPEEGNIFYWKETISGSKDTVFEGTEYRLSLAFPNEYPFKPPKVKFETSCFHPNVDILGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQA
AQLWSNQKEYRKMVEKLYKAPTA