CuGenDBv2

Gene ID	MS005496
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Origin recognition complex subunit 1
Genome location	scaffold1030:380290..380607
RNA-Seq Expression	MS005496
Synteny	MS005496
Gene Ontology terms	GO:0006270 - DNA replication initiation (biological process) GO:0006325 - chromatin organization (biological process) GO:0033314 - mitotic DNA replication checkpoint (biological process) GO:0005664 - nuclear origin of replication recognition complex (cellular component) GO:0003682 - chromatin binding (molecular function) GO:0003688 - DNA replication origin binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6632471.1 hypothetical protein CIPAW_13G161800, partial [Carya illinoinensis]

2.5e-15

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C+LGEC IILCESGAKH LQKLQLNFPSDDV+FALK SKD+PWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

KZV33999.1 origin recognition complex subunit 1-like [Dorcoceras hygrometricum]

1.1e-15

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C+LGEC I+LCESGAKH LQKLQLN+PSDDVTFALK SKDLPWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

XP_018830877.1 origin of replication complex subunit 1B-like [Juglans regia]

2.5e-15

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C+LGEC IILCESGAKH LQKLQLNFPSDDV+FALK SKD+PWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

XP_022154362.1 origin of replication complex subunit 1B-like [Momordica charantia]

9.1e-18

93.75

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        CRLGEC IILCESGAKH LQKLQLNFPSDDV+FALKGSKDLPWLDKYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

XP_038890220.1 origin of replication complex subunit 1B-like isoform X1 [Benincasa hispida]

1.1e-15

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        CRLGEC +ILCESGAKH LQKLQLNFPSDDV+FALK SKD+PWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

TrEMBL top hits

e value

%identity

Alignment

A0A2I4FGW5 Origin recognition complex subunit 1

1.2e-15

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C+LGEC IILCESGAKH LQKLQLNFPSDDV+FALK SKD+PWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

A0A2Z7BKV4 Origin recognition complex subunit 1

5.4e-16

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C+LGEC I+LCESGAKH LQKLQLN+PSDDVTFALK SKDLPWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

A0A6J1DLH3 Origin recognition complex subunit 1

4.4e-18

93.75

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        CRLGEC IILCESGAKH LQKLQLNFPSDDV+FALKGSKDLPWLDKYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

A0A6J1ICM7 Origin recognition complex subunit 1

1.2e-15

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        CRLGEC IILCESG+KH LQKLQLNFP+DDV+FALK SKDLPWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

A0A6J1IG29 Origin recognition complex subunit 1

1.2e-15

85.42

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        CRLGEC IILCESG+KH LQKLQLNFP+DDV+FALK SKDLPWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

SwissProt top hits

e value

%identity

Alignment

Q5SMU7 Origin of replication complex subunit 1

1.5e-15

77.08

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C+LGE  IILCE G KH LQKLQLN+PSDDVTFALK S D+PWL KYL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

Q710E8 Origin of replication complex subunit 1A

8.9e-16

77.08

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C LGEC I+LCE G KH LQKLQLNFPSDDV FALK +KDLPWL  YL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

Q9SU24 Origin of replication complex subunit 1B

6.8e-16

79.17

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C LGEC IILCE G KH LQKLQLNFPSDDV FALK +KDLPWL  YL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

Arabidopsis top hits

e value

%identity

Alignment

AT4G12620.1 origin of replication complex 1B

4.8e-17

79.17

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C LGEC IILCE G KH LQKLQLNFPSDDV FALK +KDLPWL  YL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

AT4G14700.1 origin recognition complex 1

6.3e-17

77.08

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Query:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL
        C LGEC I+LCE G KH LQKLQLNFPSDDV FALK +KDLPWL  YL
Subjt:  CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

Sequences

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CDS sequence

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TGTAGGCTTGGTGAATGCATAATTATTTTATGTGAATCAGGAGCCAAACATCTATTACAAAAATTGCAACTTAATTTTCCAAGCGATGATGTAACATTTGCACTGAAAGG
CAGCAAGGATCTACCATGGTTGGACAAGTATCTA

mRNA sequence

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TGTAGGCTTGGTGAATGCATAATTATTTTATGTGAATCAGGAGCCAAACATCTATTACAAAAATTGCAACTTAATTTTCCAAGCGATGATGTAACATTTGCACTGAAAGG
CAGCAAGGATCTACCATGGTTGGACAAGTATCTA

Protein sequence

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CRLGECIIILCESGAKHLLQKLQLNFPSDDVTFALKGSKDLPWLDKYL

MS005496 (gene) of Bitter gourd (TR) v1 genome