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MS005571 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005571
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase
Genome locationscaffold254:47916..48113
RNA-Seq ExpressionMS005571
SyntenyMS005571
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6764620.1 hypothetical protein POTOM_032098 [Populus tomentosa]4.9e-0644.26Show/hide
Query:  KYLIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVDGIVL
        K L+F K   E S  SL R+  Q+  + P L+DV ++NHG A+WF AM++HW+LL + ++L
Subjt:  KYLIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVDGIVL
XP_010941030.1 uncharacterized protein LOC105059433, partial [Elaeis guineensis]1.6e-0447.27Show/hide
Query:  LIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVD
        L+ ++  PE   G L  +G +E  V P LV+VL+D+ GFAD F+ +DEH +LLVD
Subjt:  LIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVD
TrEMBL top hitse value%identityAlignment
A0A6I9SK34 uncharacterized protein LOC1050594337.7e-0547.27Show/hide
Query:  LIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVD
        L+ ++  PE   G L  +G +E  V P LV+VL+D+ GFAD F+ +DEH +LLVD
Subjt:  LIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVD
A0A6N2N206 DNA-directed RNA polymerase1.1e-0851.67Show/hide
Query:  YLIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVDGIVL
        YLIF KFDPE S  SL  + RQ+  + P L+DV ++NHG A+W  AM++H +LLV+ +VL
Subjt:  YLIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVDGIVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGGAATGACGAAGAAGTACCTTATCTTCAATAAATTTGATCCAGAACCGAGCGGTGGCTCTCTCGAAAGGATCGGAAGGCAGGAGCGGTTTGTGCGGCCATGTCTCGT
CGATGTACTCGAGGATAATCATGGATTCGCAGACTGGTTTTCCGCCATGGACGAGCACTGGAATCTTCTTGTGGACGGGATTGTACTG
mRNA sequenceShow/hide mRNA sequence
GCGGGAATGACGAAGAAGTACCTTATCTTCAATAAATTTGATCCAGAACCGAGCGGTGGCTCTCTCGAAAGGATCGGAAGGCAGGAGCGGTTTGTGCGGCCATGTCTCGT
CGATGTACTCGAGGATAATCATGGATTCGCAGACTGGTTTTCCGCCATGGACGAGCACTGGAATCTTCTTGTGGACGGGATTGTACTG
Protein sequenceShow/hide protein sequence
AGMTKKYLIFNKFDPEPSGGSLERIGRQERFVRPCLVDVLEDNHGFADWFSAMDEHWNLLVDGIVL