; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005574 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005574
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold254:54001..56278
RNA-Seq ExpressionMS005574
SyntenyMS005574
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597321.1 hypothetical protein SDJN03_10501, partial [Cucurbita argyrosperma subsp. sororia]1.2e-11682.52Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
        M  +  LGGG +WKTRKK + ENVSDER  +NG+ +VLLQDP +VLG DLLMAILGYVD+RSVALSLLVSRSWY +ASSD LWSSKCVELWLGKAHIPRL
Subjt:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL

Query:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
        A  +GLP +AAYSLSVMDG RTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGS  LMRRYFHPDGSQTADPDDRVWGGHECCFS VT+  G DGKIR
Subjt:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR

Query:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        EHYVRIN+WPRMLVSRNEDWSW++SN F SYSSIADA+KDGGTGPL
Subjt:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

KAG7028788.1 hypothetical protein SDJN02_09969 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-11682.52Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
        M  +  LGGG +WKTRKK + ENVSDER  +NG+ +VLLQDP +VLG DLLMAILGYVD+RSVALSLLVSRSWY +ASSD LWSSKCVELWLGKAHIPRL
Subjt:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL

Query:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
        A  +GLP +AAYSLSVMDG RTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGS  LMRRYFHPDGSQTADPDDRVWGGHECCFS VT+  G DGKIR
Subjt:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR

Query:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        EHYVRIN+WPRMLVSRNEDWSW++SN F SYSSIADA+KDGGTGPL
Subjt:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

XP_004134023.1 uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus]2.2e-11582.26Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKP-ENVSDERRLENG-SENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIP
        M Q+D LGGGA+WK+RKKKK  E VSDER  +N  + N LLQDP +VLG DLL+AIL Y+DARSVALSL VSRSWYAVASSDRLWSSKC+ELWLGKAHIP
Subjt:  MVQTDGLGGGAQWKTRKKKKP-ENVSDERRLENG-SENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIP

Query:  RLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGK
        RLA  +GLP LAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGS PLMRRYFHPDG+QTADPDDRVWGGHE CFS VTSF G DG+
Subjt:  RLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGK

Query:  IREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        IREHYVRINRWPRM VSRNEDWSW++SN F SYSSIAD +K GGTGPL
Subjt:  IREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

XP_022157958.1 uncharacterized protein LOC111024557 isoform X1 [Momordica charantia]1.6e-14298.78Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
        MVQTDGLGGGA WKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
Subjt:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL

Query:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
        AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
Subjt:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR

Query:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        EHYVRINRWPRMLVSRNEDWSWKLSNQ ASYSSIADADKDGGTGPL
Subjt:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

XP_038875840.1 uncharacterized protein LOC120068200 [Benincasa hispida]1.2e-11884.15Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
        M Q+D LGGGA+WKTRKKK+ ENVSD R  +NG+ NVLLQDP +VLG DL MAIL Y+DARSVALSLLVSRSWYA+ASSDRLWSSKC ELWLGKAHIPRL
Subjt:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL

Query:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
        A  +GLP LAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CF  VTSF G DG+IR
Subjt:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR

Query:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        EHYVRIN+WPRM VSRNEDWSWK+SN F SYSSIADA+K GGTGPL
Subjt:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

TrEMBL top hitse value%identityAlignment
A0A0A0L471 F-box domain-containing protein1.1e-11582.26Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKP-ENVSDERRLENG-SENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIP
        M Q+D LGGGA+WK+RKKKK  E VSDER  +N  + N LLQDP +VLG DLL+AIL Y+DARSVALSL VSRSWYAVASSDRLWSSKC+ELWLGKAHIP
Subjt:  MVQTDGLGGGAQWKTRKKKKP-ENVSDERRLENG-SENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIP

Query:  RLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGK
        RLA  +GLP LAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGS PLMRRYFHPDG+QTADPDDRVWGGHE CFS VTSF G DG+
Subjt:  RLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGK

Query:  IREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        IREHYVRINRWPRM VSRNEDWSW++SN F SYSSIAD +K GGTGPL
Subjt:  IREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

A0A1S3AWZ4 uncharacterized protein LOC103483521 isoform X15.2e-11580.39Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKP--------ENVSDERRLEN-GSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELW
        M Q+D L GGA+WKTRKKKK         E VSDER  +N  + N +LQDP +VLG DLLM IL Y+DARSVALSLLVSRSWYAVASSDRLWSSKC+ELW
Subjt:  MVQTDGLGGGAQWKTRKKKKP--------ENVSDERRLEN-GSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELW

Query:  LGKAHIPRLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTS
        LGKAHIPRLA  +GLP LAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CFS VTS
Subjt:  LGKAHIPRLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTS

Query:  FAGDDGKIREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        F G DG+IREHYVRINRWPRM VSRNEDWSW++SN F SYSSIAD DK GGTGPL
Subjt:  FAGDDGKIREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

A0A5D3D180 F-box family protein2.2e-11379.84Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKP------ENVSDERRLEN-GSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLG
        M Q+D L  GA+WKTRKKKK       E VSDER  +N  + N +LQDP +VLG DLLM IL Y+DARSVALSLLVSRSWYAVASSDRLWSSKC+ELW G
Subjt:  MVQTDGLGGGAQWKTRKKKKP------ENVSDERRLEN-GSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLG

Query:  KAHIPRLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFA
        KAHIPRLA  +GLP LAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CFS VTSF 
Subjt:  KAHIPRLAYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFA

Query:  GDDGKIREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        G DG+IREHYVRINRWPRM VSRNEDWSW++SN F SY SIAD DK GGTGPL
Subjt:  GDDGKIREHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

A0A6J1DUH1 uncharacterized protein LOC111024557 isoform X21.4e-11584.55Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
        MVQTDGLGGGA WKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSK              
Subjt:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL

Query:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
                             TRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
Subjt:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR

Query:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        EHYVRINRWPRMLVSRNEDWSWKLSNQ ASYSSIADADKDGGTGPL
Subjt:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

A0A6J1DUS5 uncharacterized protein LOC111024557 isoform X17.8e-14398.78Show/hide
Query:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
        MVQTDGLGGGA WKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL
Subjt:  MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRL

Query:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
        AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAP YWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR
Subjt:  AYIQGLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIR

Query:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL
        EHYVRINRWPRMLVSRNEDWSWKLSNQ ASYSSIADADKDGGTGPL
Subjt:  EHYVRINRWPRMLVSRNEDWSWKLSNQFASYSSIADADKDGGTGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGACCGACGGGCTCGGAGGCGGAGCGCAGTGGAAAACAAGGAAGAAGAAGAAGCCGGAGAATGTCTCAGATGAACGGAGACTAGAAAATGGAAGCGAAAATGT
CCTTCTCCAAGATCCTCTGCAGGTGTTAGGTCCTGATCTGTTGATGGCGATACTGGGCTACGTTGACGCACGCAGCGTGGCACTCTCTCTCCTCGTCTCTCGCTCCTGGT
ATGCCGTCGCTTCCAGTGATCGTTTATGGAGTTCGAAGTGCGTGGAACTGTGGCTTGGGAAAGCACATATTCCTAGATTGGCGTACATCCAAGGTCTACCGTACCTGGCT
GCCTATTCATTATCCGTCATGGATGGCAAACGTACTCGCATTATGAGGGAGGACTTGTGTGATCATGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGCATACTGGCG
AGATCTTGATCCGTACTGGCAAGGCAGCCGCCCTCTCATGCGCCGTTATTTCCATCCCGACGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAAT
GCTGCTTTTCCGTTGTTACCAGTTTTGCTGGTGATGATGGTAAGATCAGAGAACACTACGTGAGGATAAACAGATGGCCAAGAATGTTAGTGTCAAGGAACGAAGATTGG
AGCTGGAAGCTGTCGAATCAGTTCGCCTCATACTCGAGCATCGCCGATGCTGACAAGGATGGCGGGACAGGGCCACTT
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGACCGACGGGCTCGGAGGCGGAGCGCAGTGGAAAACAAGGAAGAAGAAGAAGCCGGAGAATGTCTCAGATGAACGGAGACTAGAAAATGGAAGCGAAAATGT
CCTTCTCCAAGATCCTCTGCAGGTGTTAGGTCCTGATCTGTTGATGGCGATACTGGGCTACGTTGACGCACGCAGCGTGGCACTCTCTCTCCTCGTCTCTCGCTCCTGGT
ATGCCGTCGCTTCCAGTGATCGTTTATGGAGTTCGAAGTGCGTGGAACTGTGGCTTGGGAAAGCACATATTCCTAGATTGGCGTACATCCAAGGTCTACCGTACCTGGCT
GCCTATTCATTATCCGTCATGGATGGCAAACGTACTCGCATTATGAGGGAGGACTTGTGTGATCATGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGCATACTGGCG
AGATCTTGATCCGTACTGGCAAGGCAGCCGCCCTCTCATGCGCCGTTATTTCCATCCCGACGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAAT
GCTGCTTTTCCGTTGTTACCAGTTTTGCTGGTGATGATGGTAAGATCAGAGAACACTACGTGAGGATAAACAGATGGCCAAGAATGTTAGTGTCAAGGAACGAAGATTGG
AGCTGGAAGCTGTCGAATCAGTTCGCCTCATACTCGAGCATCGCCGATGCTGACAAGGATGGCGGGACAGGGCCACTT
Protein sequenceShow/hide protein sequence
MVQTDGLGGGAQWKTRKKKKPENVSDERRLENGSENVLLQDPLQVLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRLAYIQGLPYLA
AYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPAYWRDLDPYWQGSRPLMRRYFHPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIREHYVRINRWPRMLVSRNEDW
SWKLSNQFASYSSIADADKDGGTGPL