CuGenDBv2

Gene ID	MS005583
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Genome location	scaffold254:99949..100374
RNA-Seq Expression	MS005583
Synteny	MS005583
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]

6.5e-72

93.66

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDF W V+TNFWI TTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        DAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]

1.6e-70

93.01

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDF W V+TNFWI  TTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        FDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

XP_016898907.1 PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo]

1.6e-70

93.01

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDF W V+TNFWI  TTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        FDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

XP_022949667.1 S-protein homolog 5 [Cucurbita moschata]

3.6e-70

90.85

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFFTVF+SLLP + LYGIEYEVRVINGFTNNSSLPLVIWCASKD+DIGGRALQEHDDF WLV+TNFWI TTSQFSCTVKLDRTR+SF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        DAFKVPRDIYRCS  RKCSWLVMEDGFYFSDDEV+WKK+FSW
Subjt:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]

1.1e-71

93.66

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFF+VFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD+DIGGRALQEHDDF W V+TNFWI TTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        DAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSD2 S-protein homolog

7.8e-71

93.01

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDF W V+TNFWI  TTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        FDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

A0A5A7U6C9 S-protein homolog

7.8e-71

93.01

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDF W V+TNFWI  TTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWI-FTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        FDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  FDAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

A0A5D3D3G0 S-protein homolog

3.2e-72

93.66

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDF W V+TNFWI TTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        DAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

A0A6J1D066 S-protein homolog

4.4e-66

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Query:  VFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSPLRK
        V V L   EQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSPLRK
Subjt:  VFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSPLRK

Query:  CSWLVMEDGFYFSDDEVSWKKDFSW
        CSWLVMEDGFYFSDDEVSWKKDFSW
Subjt:  CSWLVMEDGFYFSDDEVSWKKDFSW

A0A6J1GCS3 S-protein homolog

1.7e-70

90.85

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Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFFTVF+SLLP + LYGIEYEVRVINGFTNNSSLPLVIWCASKD+DIGGRALQEHDDF WLV+TNFWI TTSQFSCTVKLDRTR+SF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        DAFKVPRDIYRCS  RKCSWLVMEDGFYFSDDEV+WKK+FSW
Subjt:  DAFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26798.1 Plant self-incompatibility protein S1 family

2.7e-07

32.63

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Query:  VRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSPLRKCSWLVMEDG
        V +IN  T N    LV+ C +K  D+G  AL+  +   +  R N  +  T+ ++CT       K+FD F+V RD      C   R+C W + E G
Subjt:  VRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSPLRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family

3.0e-38

53.19

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Query:  ILISILMLIFFPFFTVFVSLL-PAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFD
        I++ + MLI      +F  +L P     G E++VRVIN F +NSSLPLVIWC S   D+GGRALQE DDF W  + + W +  ++++CT+K D  RK F+
Subjt:  ILISILMLIFFPFFTVFVSLL-PAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFD

Query:  AFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW
        AFKV RD  RC   +KCSW V EDGFYFS DEV W KDFSW
Subjt:  AFKVPRDIYRCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

Sequences

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CDS sequence

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ATGAAGATTCTCATTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATAGAATACGAAGTCCGCGT
GATCAATGGCTTCACAAACAATTCCTCACTGCCTCTGGTGATATGGTGTGCGTCCAAAGACAATGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCGGCTGGC
TCGTCAGGACCAACTTCTGGATTTTTACAACTTCTCAATTCTCATGCACGGTCAAACTGGACCGGACGAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTAT
CGCTGTAGTCCTCTCAGGAAATGCTCTTGGCTGGTTATGGAAGATGGATTCTATTTCAGTGACGACGAAGTAAGCTGGAAGAAGGATTTCTCGTGG

mRNA sequence

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Protein sequence

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MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDNDIGGRALQEHDDFGWLVRTNFWIFTTSQFSCTVKLDRTRKSFDAFKVPRDIY
RCSPLRKCSWLVMEDGFYFSDDEVSWKKDFSW

MS005583 (gene) of Bitter gourd (TR) v1 genome