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MS005585 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005585
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein
Genome locationscaffold254:114147..114359
RNA-Seq ExpressionMS005585
SyntenyMS005585
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597313.1 hypothetical protein SDJN03_10493, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1574.65Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL VML LA VAA ATAAR VPGG +++ VDAVEVKAAELPA  GDA RD+K F+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

KAG7028780.1 hypothetical protein SDJN02_09961, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1574.65Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL VML LA VAA ATAAR VPGG +++ VDAVEVKAAELPA  GDA RD+K F+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

XP_011652752.1 glycine-rich protein 23 [Cucumis sativus]5.3e-1472.6Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELP--ADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL VM LL AVA    AAR VPGG Q E V+AVEVKAAELP  A  GDAVRD+KNF+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELP--ADIGDAVRDQKNFLYGGVGGFAGMGGYS

XP_022146906.1 glycine-rich cell wall structural protein [Momordica charantia]1.1e-2798.59Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

XP_022974868.1 glycine-rich cell wall structural protein [Cucurbita maxima]9.1e-1470.42Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL VML LA VA    AAR VPG  Q++ VDAVEVKAAELP   G AVRD+KNF+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

TrEMBL top hitse value%identityAlignment
A0A5D3CZJ9 Putative PE-PGRS family protein PE_PGRS463.7e-1368.49Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELP--ADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL V+ LL A+A    AAR VPGG Q E V+AVEVKAAELP  A  GD VRD+KNF+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELP--ADIGDAVRDQKNFLYGGVGGFAGMGGYS

A0A6J1D0S3 glycine-rich cell wall structural protein5.3e-2898.59Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

A0A6J1G005 glycine-rich cell wall structural protein 1 isoform X21.3e-1370.42Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL VML LA VAA ATAAR VPG  +++ VDAV+VKAAEL A  GDA RD+K F+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

A0A6J1G053 glycine-rich protein 5 isoform X11.3e-1370.42Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL VML LA VAA ATAAR VPG  +++ VDAV+VKAAEL A  GDA RD+K F+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

A0A6J1IHK9 glycine-rich cell wall structural protein4.4e-1470.42Show/hide
Query:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS
        M KL VML LA VA    AAR VPG  Q++ VDAVEVKAAELP   G AVRD+KNF+YGGVGGFAGMGGY+
Subjt:  MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAGCTGTGTGTAATGCTCCTGTTGGCAGCCGTTGCGGCGGTGGCCACGGCGGCTCGCCAGGTTCCCGGTGGTGGCCAGATGGAGCTCGTCGATGCCGTTGAAGT
GAAGGCGGCGGAGTTACCGGCGGATATTGGGGATGCTGTTCGTGACCAGAAGAATTTTCTCTACGGCGGAGTTGGCGGCTTCGCTGGCATGGGCGGGTACTCT
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAGCTGTGTGTAATGCTCCTGTTGGCAGCCGTTGCGGCGGTGGCCACGGCGGCTCGCCAGGTTCCCGGTGGTGGCCAGATGGAGCTCGTCGATGCCGTTGAAGT
GAAGGCGGCGGAGTTACCGGCGGATATTGGGGATGCTGTTCGTGACCAGAAGAATTTTCTCTACGGCGGAGTTGGCGGCTTCGCTGGCATGGGCGGGTACTCT
Protein sequenceShow/hide protein sequence
MFKLCVMLLLAAVAAVATAARQVPGGGQMELVDAVEVKAAELPADIGDAVRDQKNFLYGGVGGFAGMGGYS