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MS005588 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005588
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFormamidopyrimidine-DNA glycosylase-like
Genome locationscaffold254:139676..139796
RNA-Seq ExpressionMS005588
SyntenyMS005588
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28502.1 hypothetical protein Acr_00g0002190 [Actinidia rufa]3.1e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   VNRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
KAA0052849.1 hypothetical protein E6C27_scaffold48743G00020 [Cucumis melo var. makuwa]6.9e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCPK   V RKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
KAF5176196.1 hypothetical protein FRX31_034217 [Thalictrum thalictroides]6.9e-1185.71Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   +NRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
OVA10604.1 hypothetical protein BVC80_6627g2 [Macleaya cordata]3.1e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   VNRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
PPR89037.1 hypothetical protein GOBAR_AA31657 [Gossypium barbadense]3.1e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   VNRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
TrEMBL top hitse value%identityAlignment
A0A200QJH9 Uncharacterized protein1.5e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   VNRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
A0A2G5CPA4 Uncharacterized protein3.3e-1185.71Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   +NRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
A0A2P5WDA1 Uncharacterized protein1.5e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   VNRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
A0A5D2LBI2 Uncharacterized protein1.5e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   VNRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
A0A7J0D6T3 Uncharacterized protein1.5e-1188.1Show/hide
Query:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
        MAARKGDL+LYSGDLFPTEARKLPSCP+   VNRKGKPTHPS
Subjt:  MAARKGDLMLYSGDLFPTEARKLPSCPK--HVNRKGKPTHPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAAGAAAAGGCGATCTTATGCTATACTCCGGTGATCTCTTTCCTACCGAGGCACGCAAACTCCCATCGTGTCCCAAACACGTGAATCGAAAGGGGAAGCCTAC
TCATCCATCA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAAGAAAAGGCGATCTTATGCTATACTCCGGTGATCTCTTTCCTACCGAGGCACGCAAACTCCCATCGTGTCCCAAACACGTGAATCGAAAGGGGAAGCCTAC
TCATCCATCA
Protein sequenceShow/hide protein sequence
MAARKGDLMLYSGDLFPTEARKLPSCPKHVNRKGKPTHPS