; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005606 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005606
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSignal recognition particle receptor subunit beta
Genome locationscaffold254:234289..235788
RNA-Seq ExpressionMS005606
SyntenyMS005606
Gene Ontology termsGO:0045047 - protein targeting to ER (biological process)
GO:0005785 - signal recognition particle receptor complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR019009 - Signal recognition particle receptor, beta subunit
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135257.1 signal recognition particle receptor subunit beta [Cucumis sativus]3.3e-13393.21Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLL TRL KRRKSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEI+K DKLKPVHLVDVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK
        EKEIDKLRVSRSAISAADIANDFTLG+PGKAFSF+QCHNKVAV EASGL G+V+EVEQFIRENVK
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK

XP_008446189.1 PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo]3.6e-13292.45Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLLLTRL KRRKSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEI+K DKLKPVHLVDVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK
        EKEIDKLRVSRSAIS ADI+NDFTLG+PGKAFSF+QC+NKVAV EASGL G+V+EVEQFIRENVK
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK

XP_022147102.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia]5.6e-14199.25Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEISK DKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

XP_022147108.1 signal recognition particle receptor subunit beta-like isoform X2 [Momordica charantia]1.1e-13999.25Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEISK DKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

XP_022151281.1 signal recognition particle receptor subunit beta-like [Momordica charantia]8.6e-13494.36Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKV  EQ+KVQMEQWLQ GLE VHQIPPIQLYVGVGVLLLTTLLLLLTRL KRRKSNTIVL GLSGSGKTV+FYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEISK +KLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQ 
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKV V EASGL G+VTEVEQFIRENVKP
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

TrEMBL top hitse value%identityAlignment
A0A0A0KSA6 Signal recognition particle receptor subunit beta1.6e-13393.21Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLL TRL KRRKSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEI+K DKLKPVHLVDVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK
        EKEIDKLRVSRSAISAADIANDFTLG+PGKAFSF+QCHNKVAV EASGL G+V+EVEQFIRENVK
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK

A0A6J1D0D7 Signal recognition particle receptor subunit beta5.1e-14099.25Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEISK DKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

A0A6J1D1F7 Signal recognition particle receptor subunit beta2.7e-14199.25Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRL KRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEISK DKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

A0A6J1DE59 Signal recognition particle receptor subunit beta4.2e-13494.36Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKV  EQ+KVQMEQWLQ GLE VHQIPPIQLYVGVGVLLLTTLLLLLTRL KRRKSNTIVL GLSGSGKTV+FYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEISK +KLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQ 
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKV V EASGL G+VTEVEQFIRENVKP
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

E5GBI2 Signal recognition particle receptor subunit beta1.8e-13292.45Show/hide
Query:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG
        MEGTEQWKVQ EQ+KVQMEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLLLTRL KRRKSNTIVL GLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEG
Subjt:  MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEG

Query:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
        TFVLHSEI+K DKLKPVHLVDVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
Subjt:  TFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

Query:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK
        EKEIDKLRVSRSAIS ADI+NDFTLG+PGKAFSF+QC+NKVAV EASGL G+V+EVEQFIRENVK
Subjt:  EKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVK

SwissProt top hitse value%identityAlignment
P36057 Signal recognition particle receptor subunit beta2.4e-0932.08Show/hide
Query:  TRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAA----GVVFVVDAL
        T + ++    +I++ G   SGKT L   L    S + TV S EP        S ++         LVD PGH +LR KL ++L   A    G++F+VD+ 
Subjt:  TRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAA----GVVFVVDAL

Query:  DFLPNCRAASEYLYDILT-NASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKL
                 +E+L DIL+   S  +  I +LI CNK++  TA     I   +E EI K+
Subjt:  DFLPNCRAASEYLYDILT-NASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKL

P47758 Signal recognition particle receptor subunit beta6.0e-2134.06Show/hide
Query:  VHQIPPIQLYVGVGVL-LLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSR
        + Q  P  L V V +L +L TL+      +++     ++  GL  SGKT+LF +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  
Subjt:  VHQIPPIQLYVGVGVL-LLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSR

Query:  LRAK-LDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAI-SAADIAN--DF
        LR + LD F   A  VVFVVD+  F    +  +E+LY +L ++  +K    +LI CNK D   A + + I +Q+EKE++ LRV+RSA  S  D ++    
Subjt:  LRAK-LDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAI-SAADIAN--DF

Query:  TLGVPGKAFSFSQCHNKVAVGEASGLMGQ
         LG  GK F FSQ   KV   E S   G+
Subjt:  TLGVPGKAFSFSQCHNKVAVGEASGLMGQ

Q4FZX7 Signal recognition particle receptor subunit beta4.6e-2134.06Show/hide
Query:  VHQIPPIQLYVGVGVL-LLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSR
        + Q  P  L V V VL +L TL+      +++     ++  GL  SGKT+LF +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  
Subjt:  VHQIPPIQLYVGVGVL-LLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSR

Query:  LRAK-LDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAI-SAADIAN--DF
        LR + LD F   A  VVFVVD+  F    +  +E+LY +L ++  +K     L+ CNK D   A + + I +Q+EKE++ LRV+RSA  S  D ++    
Subjt:  LRAK-LDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAI-SAADIAN--DF

Query:  TLGVPGKAFSFSQCHNKVAVGEASGLMGQ
         LG  GK F FSQ   KV   E S   G+
Subjt:  TLGVPGKAFSFSQCHNKVAVGEASGLMGQ

Q54XX1 Signal recognition particle receptor subunit beta2.6e-2433.01Show/hide
Query:  KRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRA
        K ++   I + GLS +GKT L   L +      T TS+  N G ++  ++       K + ++DVPG+ + +A L + L  +A +++V+D   F+ N   
Subjt:  KRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRA

Query:  ASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSA----ISAADIANDFTLGVPGKAFSFSQCHNKV--AVGEASGLMG
         ++YLYDILTN SV +KKIPVL+  NK D  +    E +   +E+E+D LR +R A    +   +   D  LG+ G  F F    N V  + G AS   G
Subjt:  ASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSA----ISAADIANDFTLGVPGKAFSFSQCHNKV--AVGEASGLMG

Query:  QVTEVE
        ++ E++
Subjt:  QVTEVE

Q9Y5M8 Signal recognition particle receptor subunit beta1.7e-2034.5Show/hide
Query:  VHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKS-NTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSR
        + Q  P  L V V VL +   L+    +  RR S   ++L GL  SGKT+LF +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  
Subjt:  VHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKS-NTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLKPVHLVDVPGHSR

Query:  LRAK-LDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAI-SAADIAN--DF
        LR + L+ F   A  +VFVVD+  F    +  +E+LY +L ++  +K     LI CNK D   A + + I +Q+EKE++ LRV+RSA  S  D ++    
Subjt:  LRAK-LDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAI-SAADIAN--DF

Query:  TLGVPGKAFSFSQCHNKVAVGEASGLMGQ
         LG  GK F FSQ   KV   E S   G+
Subjt:  TLGVPGKAFSFSQCHNKVAVGEASGLMGQ

Arabidopsis top hitse value%identityAlignment
AT2G18770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.2e-10474.61Show/hide
Query:  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE-ISK
        E +K+  EQW + GLEFV +IPP QLY  +GVLLL T+ LL  RL +R KSNT++L GLSGSGKTVLFYQLRDGSSHQG VTSMEPNEGTFVLH+E  +K
Subjt:  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE-ISK

Query:  MDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVS
          K+KPVHL+DVPGHSRL +KL+E+LP+AA VVFVVDAL+FLPN RAASEYLYDILTNASV+K K PVL+ CNKTDKVTAHTKEFI +QMEKEIDKLRVS
Subjt:  MDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVS

Query:  RSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        RSAIS ADIANDFTLG+ G+ FSFS CHNKV V EASGL G+  +V++FIRE+VKP
Subjt:  RSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

AT3G49870.1 ADP-ribosylation factor-like A1C3.6e-0530.83Show/hide
Query:  GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLK-PVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILT
        GL  +GKT L   +  G    G    M P  G       + K+ K    + L D+ G  R R+  + +    + +V+VVDA D   N   +   L+D+L+
Subjt:  GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDKLK-PVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILT

Query:  NASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
          S+    IP+L+L NK DK  A +KE +  +M
Subjt:  NASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

AT5G05670.1 signal recognition particle binding3.1e-10573.05Show/hide
Query:  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLT-RLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK
        E +K+  EQW   G+E++ +IPP QLY  +GVLL TT+LL L+ RL +R KSNT++L GL+GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE +K
Subjt:  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLT-RLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK

Query:  MDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVS
          K+KPVHLVDVPGHSRLR KL+EFLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+TAHTKEFI +QMEKEI+KLR S
Subjt:  MDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVS

Query:  RSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        RSA+S ADIANDFT+G+ G+ FSF+ C NKV V EASGL G+  ++E FIRE +KP
Subjt:  RSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

AT5G05670.2 signal recognition particle binding3.1e-10573.05Show/hide
Query:  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLT-RLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK
        E +K+  EQW   G+E++ +IPP QLY  +GVLL TT+LL L+ RL +R KSNT++L GL+GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE +K
Subjt:  EQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLT-RLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK

Query:  MDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVS
          K+KPVHLVDVPGHSRLR KL+EFLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+TAHTKEFI +QMEKEI+KLR S
Subjt:  MDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVS

Query:  RSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP
        RSA+S ADIANDFT+G+ G+ FSF+ C NKV V EASGL G+  ++E FIRE +KP
Subjt:  RSAISAADIANDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP

AT5G67560.1 ADP-ribosylation factor-like A1D2.8e-0530.83Show/hide
Query:  GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDK-LKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILT
        GL  +GKT L   +  G    G    M P  G       + K+ K    + L D+ G  R R+  + +    + +V+VVDA D   N   +   L+D+L+
Subjt:  GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKMDK-LKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILT

Query:  NASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
          S+    IP+L+L NK DK  A +KE +  +M
Subjt:  NASVVKKKIPVLILCNKTDKVTAHTKEFINRQM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAACAGAACAGTGGAAGGTTCAGGCGGAACAAGTGAAGGTCCAGATGGAGCAATGGCTACAACTAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAGCT
CTACGTCGGGGTTGGCGTGTTGCTATTAACTACACTACTTCTCTTATTGACTCGCTTGAACAAGCGCAGAAAATCGAATACCATTGTTCTTGGTGGGCTAAGTGGAAGTG
GGAAAACTGTTCTCTTCTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGGCACGTTTGTGCTTCATTCTGAAATATCAAAG
ATGGACAAACTGAAGCCTGTTCATCTTGTGGATGTCCCTGGCCATTCTCGCCTTCGAGCCAAACTAGACGAGTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGA
TGCTCTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGATATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCTTGATACTATGCAATA
AAACAGACAAGGTTACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAGAAGGAAATTGACAAGCTACGAGTGTCGAGAAGCGCAATTTCGGCAGCTGATATTGCA
AATGACTTCACACTAGGGGTACCTGGTAAAGCATTTTCGTTCTCGCAGTGCCATAACAAAGTTGCAGTTGGTGAAGCCTCTGGATTGATGGGTCAAGTAACCGAGGTGGA
GCAATTTATAAGGGAAAATGTGAAGCCG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAACAGAACAGTGGAAGGTTCAGGCGGAACAAGTGAAGGTCCAGATGGAGCAATGGCTACAACTAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAGCT
CTACGTCGGGGTTGGCGTGTTGCTATTAACTACACTACTTCTCTTATTGACTCGCTTGAACAAGCGCAGAAAATCGAATACCATTGTTCTTGGTGGGCTAAGTGGAAGTG
GGAAAACTGTTCTCTTCTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGGCACGTTTGTGCTTCATTCTGAAATATCAAAG
ATGGACAAACTGAAGCCTGTTCATCTTGTGGATGTCCCTGGCCATTCTCGCCTTCGAGCCAAACTAGACGAGTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGA
TGCTCTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGATATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCTTGATACTATGCAATA
AAACAGACAAGGTTACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAGAAGGAAATTGACAAGCTACGAGTGTCGAGAAGCGCAATTTCGGCAGCTGATATTGCA
AATGACTTCACACTAGGGGTACCTGGTAAAGCATTTTCGTTCTCGCAGTGCCATAACAAAGTTGCAGTTGGTGAAGCCTCTGGATTGATGGGTCAAGTAACCGAGGTGGA
GCAATTTATAAGGGAAAATGTGAAGCCG
Protein sequenceShow/hide protein sequence
MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLNKRRKSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISK
MDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIA
NDFTLGVPGKAFSFSQCHNKVAVGEASGLMGQVTEVEQFIRENVKP