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MS005608 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005608
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold254:243875..244024
RNA-Seq ExpressionMS005608
SyntenyMS005608
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582459.1 putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1173.47Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        RADGWMEI+MGEIFNE GD+GSIIF L E  ++  K GLIV GIEIRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

XP_004134006.3 putative F-box protein PP2-B12 [Cucumis sativus]3.5e-1271.43Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R+DGWME++MGEIFNE GD+G+IIF L ++DN+  KGGLIV GIEIRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

XP_008438376.1 PREDICTED: putative F-box protein PP2-B12 [Cucumis melo]7.8e-1269.39Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R+DGWME++MGEIFNE GD+G+IIF L ++DN+  KGGLIV GI+IRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

XP_022924695.1 putative F-box protein PP2-B12 [Cucurbita moschata]1.3e-1175.51Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        RADGWMEI+MGEIFNE GD+GSIIF L E  N+  K GLIV GIEIRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

XP_038905036.1 LOW QUALITY PROTEIN: putative F-box protein PP2-B12 [Benincasa hispida]7.1e-1375.51Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R+DGWMEI+MGEIFNE GD+GSI+F L E+DN+  KGGLIV GIEIRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

TrEMBL top hitse value%identityAlignment
A0A0A0L6T0 F-box domain-containing protein1.7e-1271.43Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R+DGWME++MGEIFNE GD+G+IIF L ++DN+  KGGLIV GIEIRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

A0A1S3AW73 putative F-box protein PP2-B123.8e-1269.39Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R+DGWME++MGEIFNE GD+G+IIF L ++DN+  KGGLIV GI+IRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

A0A2P2J1B5 Uncharacterized protein4.2e-1167.35Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R DGWMEI++G  FNE GDNG ++F + EVDNY+VK GLIV GIE+RPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

A0A5A7U6B1 Putative F-box protein PP2-B123.8e-1269.39Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R+DGWME++MGEIFNE GD+G+IIF L ++DN+  KGGLIV GI+IRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

A0A6J1EFS1 putative F-box protein PP2-B126.4e-1275.51Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        RADGWMEI+MGEIFNE GD+GSIIF L E  N+  K GLIV GIEIRPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

SwissProt top hitse value%identityAlignment
O80494 F-box protein PP2-B157.1e-0849.06Show/hide
Query:  RADGWMEIKMGEI---FNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP
        R DGWMEI++GE      E  D+  ++ SL EV  Y +KGG+ + GIE+RPKP
Subjt:  RADGWMEIKMGEI---FNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP

Q949S5 F-box protein PP2-B111.3e-0652Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP
        R DGW E+++G+ F   GD G I  SL E      K GLIV GIEIRP P
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP

Q9C7J9 F-box protein PP2-B135.4e-0846Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP
        R DGW+EI++GE     G++  +  SL EV  Y +KGG+++ GIE+RP P
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP

Q9C7K0 F-box protein VBF9.3e-0846.94Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R DGWMEI++GE     G++  +  +L EV  Y +KGG+++ GIE+RPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

Q9ZVQ9 F-box protein PP2-B74.6e-0754Show/hide
Query:  RADGWMEIKMGEIFNE--FGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRP
        R DGWMEI++GE FNE  F +N  I  S++E    + K GLI+ GIEIRP
Subjt:  RADGWMEIKMGEIFNE--FGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRP

Arabidopsis top hitse value%identityAlignment
AT1G09155.1 phloem protein 2-B155.0e-0949.06Show/hide
Query:  RADGWMEIKMGEI---FNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP
        R DGWMEI++GE      E  D+  ++ SL EV  Y +KGG+ + GIE+RPKP
Subjt:  RADGWMEIKMGEI---FNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP

AT1G56240.1 phloem protein 2-B133.9e-0946Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP
        R DGW+EI++GE     G++  +  SL EV  Y +KGG+++ GIE+RP P
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP

AT1G56250.1 phloem protein 2-B146.6e-0946.94Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK
        R DGWMEI++GE     G++  +  +L EV  Y +KGG+++ GIE+RPK
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPK

AT1G80110.1 phloem protein 2-B119.5e-0852Show/hide
Query:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP
        R DGW E+++G+ F   GD G I  SL E      K GLIV GIEIRP P
Subjt:  RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP

AT2G02320.1 phloem protein 2-B73.3e-0854Show/hide
Query:  RADGWMEIKMGEIFNE--FGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRP
        R DGWMEI++GE FNE  F +N  I  S++E    + K GLI+ GIEIRP
Subjt:  RADGWMEIKMGEIFNE--FGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGCCGATGGGTGGATGGAGATTAAGATGGGGGAAATCTTTAACGAATTCGGAGATAATGGCTCCATTATTTTCAGTCTTAATGAGGTCGATAACTATAGCGTCAAAGG
TGGATTAATTGTGGCAGGAATTGAGATTAGGCCTAAACCT
mRNA sequenceShow/hide mRNA sequence
AGAGCCGATGGGTGGATGGAGATTAAGATGGGGGAAATCTTTAACGAATTCGGAGATAATGGCTCCATTATTTTCAGTCTTAATGAGGTCGATAACTATAGCGTCAAAGG
TGGATTAATTGTGGCAGGAATTGAGATTAGGCCTAAACCT
Protein sequenceShow/hide protein sequence
RADGWMEIKMGEIFNEFGDNGSIIFSLNEVDNYSVKGGLIVAGIEIRPKP