; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005632 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005632
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold254:434928..437505
RNA-Seq ExpressionMS005632
SyntenyMS005632
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133986.1 uncharacterized protein LOC101211386 [Cucumis sativus]1.5e-10279.57Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQ  NDLH+W++RV+ERRTV+DFDLNCPPPDECI+PTG  +EAAQ++NH+Q QAT   D +DEDIAIISPRKFAEARKNFRRNHF+S CG  +R NGN
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC
        TEVYGALSDVT+WPPFTIW PLTI+NNVS++E QTIHNLDL LS ESSSRA    TD DIPS LA SSS IPP   +LRCAICIEPLVEETTTKCGHVFC
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC

Query:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        RNCIETAIATQHRCPICRRKLR+RDIIRIYLPF+S
Subjt:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

XP_008438340.1 PREDICTED: uncharacterized protein LOC103483470 [Cucumis melo]6.3e-10480.85Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQ  NDLH+W+ARV+ERRTV+DFDLNCPPPDECI+PTGPR+EAAQ++NH+Q QAT   D +DEDIAIISPRKFAEARKNFRRNHF+S  G  +R NGN
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC
        TEVYGALSDVT+WPPFTIW PLTI+NNVS++E QTIHNLDL LS ESSSRA    TD DIPS LA SSS IPP   +LRCAICIEPLVEETTTKCGHVFC
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC

Query:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        RNCIETAIATQHRCPICRRKLRKRDIIRIYLPF+S
Subjt:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

XP_022147116.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Momordica charantia]1.2e-13198.72Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVR+N N
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR
        TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATD DIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR

Query:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
Subjt:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

XP_023540616.1 uncharacterized protein LOC111800927 [Cucurbita pepo subsp. pepo]3.2e-10079.4Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MS Q RNDL EW+ARVVER TVMDFDLNCPPPDECI+PTGP +EA Q++NH+Q QA DNP+ VDEDIAIISPRKFAEARKNFRRNHF+SSCGVA+R N  
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPS-LRCAICIEPLVEETTTKCGHVFC
            GA SD+TS  PFTIWPPLT  NNVSI+EQTIHNLDLCLS ESSS+A     D DIPSALAQ+SS +PPAA S LRCAICIE LVEETTTKCGHVFC
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPS-LRCAICIEPLVEETTTKCGHVFC

Query:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        ++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

XP_038874295.1 uncharacterized protein LOC120067004 [Benincasa hispida]6.3e-10482.05Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQ  NDLH+W+ARVVERRTV+DFDLNCPPPDECI+PTGPR+EAAQ++NH+Q QAT   D +DEDIAIISPRKFAEARKNFRRNHF+S CGV +R NGN
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR
        TEVYGALSD TSWPPFTI  PLTI+NNVSI+E+T+H+LDL LS ESSSRA TKATD DIPS +A SSS IP    +LRCAICIEPLVEETTTKCGHVFCR
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR

Query:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
Subjt:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

TrEMBL top hitse value%identityAlignment
A0A0A0L424 RING-type domain-containing protein7.5e-10379.57Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQ  NDLH+W++RV+ERRTV+DFDLNCPPPDECI+PTG  +EAAQ++NH+Q QAT   D +DEDIAIISPRKFAEARKNFRRNHF+S CG  +R NGN
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC
        TEVYGALSDVT+WPPFTIW PLTI+NNVS++E QTIHNLDL LS ESSSRA    TD DIPS LA SSS IPP   +LRCAICIEPLVEETTTKCGHVFC
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC

Query:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        RNCIETAIATQHRCPICRRKLR+RDIIRIYLPF+S
Subjt:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A1S3AW86 uncharacterized protein LOC1034834703.0e-10480.85Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQ  NDLH+W+ARV+ERRTV+DFDLNCPPPDECI+PTGPR+EAAQ++NH+Q QAT   D +DEDIAIISPRKFAEARKNFRRNHF+S  G  +R NGN
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC
        TEVYGALSDVT+WPPFTIW PLTI+NNVS++E QTIHNLDL LS ESSSRA    TD DIPS LA SSS IPP   +LRCAICIEPLVEETTTKCGHVFC
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC

Query:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        RNCIETAIATQHRCPICRRKLRKRDIIRIYLPF+S
Subjt:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A5A7U158 E3 ubiquitin-protein ligase RNF4-like3.0e-10480.85Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQ  NDLH+W+ARV+ERRTV+DFDLNCPPPDECI+PTGPR+EAAQ++NH+Q QAT   D +DEDIAIISPRKFAEARKNFRRNHF+S  G  +R NGN
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC
        TEVYGALSDVT+WPPFTIW PLTI+NNVS++E QTIHNLDL LS ESSSRA    TD DIPS LA SSS IPP   +LRCAICIEPLVEETTTKCGHVFC
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIRE-QTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFC

Query:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        RNCIETAIATQHRCPICRRKLRKRDIIRIYLPF+S
Subjt:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A6J1D1D9 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like5.9e-13298.72Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVR+N N
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR
        TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATD DIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCR

Query:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
Subjt:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A6J1F4D6 uncharacterized protein LOC1114419751.6e-10079.4Show/hide
Query:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN
        MS Q RNDL EW+ARVVER TVMDFDLNCPPPDECI+PTGP +EA Q++NH+Q QA DNP+ VDEDIAIISPRKFAEARKNFRRNHF+SSCGVA+R N  
Subjt:  MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGN

Query:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPS-LRCAICIEPLVEETTTKCGHVFC
            GA SD+TS  PFTIWPPLT  NNVSI+EQTIHNLDLCLS ESSS+A     D DIPSALAQ+SS +PPAA S LRCAICIE LVEETTTKCGHVFC
Subjt:  TEVYGALSDVTSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPS-LRCAICIEPLVEETTTKCGHVFC

Query:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        ++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  RNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

SwissProt top hitse value%identityAlignment
P87176 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx85.3e-0526.12Show/hide
Query:  PFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTK---------ATDADIPSALAQSSSIIPPA--APSLRCAICIEPLVEETTTKCGHVFCRNCI
        P ++   LT  N++  +  TI ++ + L+ E+S   R +          T+A+I         ++P +      +C IC++     + T CGH+FC  CI
Subjt:  PFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTK---------ATDADIPSALAQSSSIIPPA--APSLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIAT---QHRCPICRRKLRKRDIIRIYLPFSS
         +A+ T     +CP+CRRK+    +I + +   S
Subjt:  ETAIAT---QHRCPICRRKLRKRDIIRIYLPFSS

Q14258 E3 ubiquitin/ISG15 ligase TRIM255.3e-0543.64Show/hide
Query:  PAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQ---HRCPICRRKLRKR
        P A  L C+IC+EP  E  TT CGH FC +C+    A Q   + CP CR   + R
Subjt:  PAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQ---HRCPICRRKLRKR

Q6LFN2 RING finger protein PFF0165c6.9e-0538.18Show/hide
Query:  LRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR-CPICRRKLRKRDIIRIYL
        L C++C+E        KCGH++C NCI   + T++R CP C+    K+D+ +I+L
Subjt:  LRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR-CPICRRKLRKRDIIRIYL

Q95KF1 E3 ubiquitin-protein ligase RNF1254.1e-0541.25Show/hide
Query:  LSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIA-TQHRCPICRRKL
        LSS+S   A   AT    P AL +      P   S  CA+C+E L +   T+CGHVFCR+CI T++   +  CP CR  L
Subjt:  LSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIA-TQHRCPICRRKL

Q9D9R0 E3 ubiquitin-protein ligase RNF1253.7e-0641.98Show/hide
Query:  LSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR--CPICRRKL
        LSS+SS  A   AT    P  L +S     P   S  C++C+E L +   T+CGHVFCR+CI T+I   ++  CP CR  L
Subjt:  LSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR--CPICRRKL

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein3.8e-1439.77Show/hide
Query:  SSRARTKATDADIP--SALAQSSSIIPPA-APSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        S+R R+  T  D    +   +S ++ PP   P   C IC+ P  +E +TKCGH+FC+ CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  SSRARTKATDADIP--SALAQSSSIIPPA-APSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT3G07200.2 RING/U-box superfamily protein3.8e-1439.77Show/hide
Query:  SSRARTKATDADIP--SALAQSSSIIPPA-APSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        S+R R+  T  D    +   +S ++ PP   P   C IC+ P  +E +TKCGH+FC+ CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  SSRARTKATDADIP--SALAQSSSIIPPA-APSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT5G48655.1 RING/U-box superfamily protein1.8e-1627.7Show/hide
Query:  RRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGNTEVYGALSDVTSWPPFTI
        RR     DLN  P D+       R                + D +++D+   S   FAEA K+  RN       V V   G T     +S+         
Subjt:  RRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGNTEVYGALSDVTSWPPFTI

Query:  WPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRR
                 +   E  I      ++ E +  +R   + A  P          PP  P   C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP CR+
Subjt:  WPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRR

Query:  KLRKRDIIRIYLP
        K+  +++IR++LP
Subjt:  KLRKRDIIRIYLP

AT5G48655.2 RING/U-box superfamily protein1.8e-1627.7Show/hide
Query:  RRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGNTEVYGALSDVTSWPPFTI
        RR     DLN  P D+       R                + D +++D+   S   FAEA K+  RN       V V   G T     +S+         
Subjt:  RRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGNTEVYGALSDVTSWPPFTI

Query:  WPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRR
                 +   E  I      ++ E +  +R   + A  P          PP  P   C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP CR+
Subjt:  WPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRR

Query:  KLRKRDIIRIYLP
        K+  +++IR++LP
Subjt:  KLRKRDIIRIYLP

AT5G48655.3 RING/U-box superfamily protein1.8e-1627.7Show/hide
Query:  RRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGNTEVYGALSDVTSWPPFTI
        RR     DLN  P D+       R                + D +++D+   S   FAEA K+  RN       V V   G T     +S+         
Subjt:  RRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGNTEVYGALSDVTSWPPFTI

Query:  WPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRR
                 +   E  I      ++ E +  +R   + A  P          PP  P   C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP CR+
Subjt:  WPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRR

Query:  KLRKRDIIRIYLP
        K+  +++IR++LP
Subjt:  KLRKRDIIRIYLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTCAAGGTAGAAATGATCTACATGAATGGAATGCAAGAGTTGTTGAGAGAAGAACAGTAATGGACTTCGACCTCAATTGTCCACCTCCAGATGAGTGCATCAA
TCCAACTGGCCCTCGCGAGGAAGCAGCACAGTTCTTTAATCATCACCAACGACAAGCTACAGACAATCCTGACGTTGTTGATGAGGACATTGCTATAATATCCCCTAGGA
AATTTGCTGAAGCCAGGAAAAATTTTCGAAGAAACCACTTTGACAGTAGCTGTGGTGTAGCCGTCAGACTTAATGGCAACACAGAAGTTTATGGTGCTCTCTCAGATGTA
ACAAGTTGGCCCCCTTTTACAATTTGGCCGCCTCTTACAATTAACAATAACGTTTCCATACGGGAACAAACAATTCACAACTTGGACCTTTGCTTGAGCTCTGAAAGCAG
TAGCAGGGCCAGGACTAAGGCAACTGACGCTGACATTCCTTCTGCACTTGCACAAAGTAGTAGCATCATCCCGCCTGCAGCCCCCAGTTTGCGGTGTGCAATCTGCATAG
AACCGTTGGTTGAAGAAACAACAACGAAATGTGGGCACGTCTTCTGCAGGAACTGCATCGAGACCGCCATAGCTACGCAGCACAGATGTCCTATATGTCGGCGTAAGCTT
AGAAAACGAGACATTATCCGGATTTACCTTCCTTTCTCAAGT
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTCAAGGTAGAAATGATCTACATGAATGGAATGCAAGAGTTGTTGAGAGAAGAACAGTAATGGACTTCGACCTCAATTGTCCACCTCCAGATGAGTGCATCAA
TCCAACTGGCCCTCGCGAGGAAGCAGCACAGTTCTTTAATCATCACCAACGACAAGCTACAGACAATCCTGACGTTGTTGATGAGGACATTGCTATAATATCCCCTAGGA
AATTTGCTGAAGCCAGGAAAAATTTTCGAAGAAACCACTTTGACAGTAGCTGTGGTGTAGCCGTCAGACTTAATGGCAACACAGAAGTTTATGGTGCTCTCTCAGATGTA
ACAAGTTGGCCCCCTTTTACAATTTGGCCGCCTCTTACAATTAACAATAACGTTTCCATACGGGAACAAACAATTCACAACTTGGACCTTTGCTTGAGCTCTGAAAGCAG
TAGCAGGGCCAGGACTAAGGCAACTGACGCTGACATTCCTTCTGCACTTGCACAAAGTAGTAGCATCATCCCGCCTGCAGCCCCCAGTTTGCGGTGTGCAATCTGCATAG
AACCGTTGGTTGAAGAAACAACAACGAAATGTGGGCACGTCTTCTGCAGGAACTGCATCGAGACCGCCATAGCTACGCAGCACAGATGTCCTATATGTCGGCGTAAGCTT
AGAAAACGAGACATTATCCGGATTTACCTTCCTTTCTCAAGT
Protein sequenceShow/hide protein sequence
MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNPDVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRLNGNTEVYGALSDV
TSWPPFTIWPPLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDADIPSALAQSSSIIPPAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKL
RKRDIIRIYLPFSS