; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005644 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005644
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 24
Genome locationscaffold254:510613..510990
RNA-Seq ExpressionMS005644
SyntenyMS005644
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582492.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5687.3Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
        M  P+L +L  ILL +VF  THFSFCDAIL LRSLKGSEIDVMAKGVCNQKIGECLTEPEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYECH
Subjt:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDINT
         GPANSYDRGCEVITRCARDVHDINT
Subjt:  SGPANSYDRGCEVITRCARDVHDINT

XP_022146989.1 protein RALF-like 24 isoform X1 [Momordica charantia]2.6e-6498.41Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
        MAKPSLLYLILILLAVVFQHTHFSFCDAIL LRSLKGS+IDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
Subjt:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDINT
        SGPANSYDRGCEVITRCARDVHDINT
Subjt:  SGPANSYDRGCEVITRCARDVHDINT

XP_022974738.1 protein RALF-like 24 [Cucurbita maxima]3.2e-5480.95Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
        MAKP+L +L+ ILL ++F  THF FCDA+L LRSLKG++ID+M KGVCNQKIGECLTEP+MESE SRRVLMMQK+YISY+TL+RDMVPC+RPGVSYYECH
Subjt:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDINT
         GPANSYDRGCEVITRCARDVHDINT
Subjt:  SGPANSYDRGCEVITRCARDVHDINT

XP_023526933.1 protein RALF-like 24 [Cucurbita pepo subsp. pepo]1.5e-5687.3Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
        M  P+L +L  ILL +VF  THFSFCDAIL LRSLKGSEIDVMAKGVCNQKIGECLTEPEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYECH
Subjt:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDINT
         GPANSYDRGCEVITRCARDVHDINT
Subjt:  SGPANSYDRGCEVITRCARDVHDINT

XP_038875978.1 protein RALF-like 24 [Benincasa hispida]6.4e-5584.13Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
        MA P L +   ILL +VF  THFSFCDAIL LRS KGSE+D+MAKGVCNQKIGECLTEPEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYECH
Subjt:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDINT
         GPANSYDRGCE+ITRCARDVHDINT
Subjt:  SGPANSYDRGCEVITRCARDVHDINT

TrEMBL top hitse value%identityAlignment
A0A0A0L7V8 Uncharacterized protein8.5e-5384.3Show/hide
Query:  LLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPAN
        L +L  I+  +VF  THFSFCDAIL LRS KGSE++VMAKGVCNQKIGECLT+PEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYECH GPAN
Subjt:  LLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPAN

Query:  SYDRGCEVITRCARDVHDINT
        SYDRGCEVITRCARDVHDINT
Subjt:  SYDRGCEVITRCARDVHDINT

A0A1S3AWQ1 protein RALF-like 24 isoform X11.7e-5382.81Show/hide
Query:  MAKPSLLYLIL--ILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYE
        MAK   L+  L  I+  +VF  THFSFCDAIL LRS KGSE+DVMAKGVCNQKIGECLT+PEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYE
Subjt:  MAKPSLLYLIL--ILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYE

Query:  CHSGPANSYDRGCEVITRCARDVHDINT
        CH GPANSYDRGCEVITRCARDVHDINT
Subjt:  CHSGPANSYDRGCEVITRCARDVHDINT

A0A5D3CZU4 Protein RALF-like 24 isoform X11.7e-5382.81Show/hide
Query:  MAKPSLLYLIL--ILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYE
        MAK   L+  L  I+  +VF  THFSFCDAIL LRS KGSE+DVMAKGVCNQKIGECLT+PEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYE
Subjt:  MAKPSLLYLIL--ILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYE

Query:  CHSGPANSYDRGCEVITRCARDVHDINT
        CH GPANSYDRGCEVITRCARDVHDINT
Subjt:  CHSGPANSYDRGCEVITRCARDVHDINT

A0A6J1D019 protein RALF-like 24 isoform X11.3e-6498.41Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
        MAKPSLLYLILILLAVVFQHTHFSFCDAIL LRSLKGS+IDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
Subjt:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDINT
        SGPANSYDRGCEVITRCARDVHDINT
Subjt:  SGPANSYDRGCEVITRCARDVHDINT

A0A6J1IH73 protein RALF-like 241.5e-5480.95Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH
        MAKP+L +L+ ILL ++F  THF FCDA+L LRSLKG++ID+M KGVCNQKIGECLTEP+MESE SRRVLMMQK+YISY+TL+RDMVPC+RPGVSYYECH
Subjt:  MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECH

Query:  SGPANSYDRGCEVITRCARDVHDINT
         GPANSYDRGCEVITRCARDVHDINT
Subjt:  SGPANSYDRGCEVITRCARDVHDINT

SwissProt top hitse value%identityAlignment
Q2HIM9 Protein RALF-like 312.1e-2463.64Show/hide
Query:  EIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYDRGCEVITRCARDVHDINT
        EID M   + N  IGE   E  M +E SRRVLM QK+YI Y+TL+RDMVPC +PG SYY+C SG ANSY RGC+ ITRCARD +DINT
Subjt:  EIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYDRGCEVITRCARDVHDINT

Q945T0 Rapid alkalinization factor2.6e-1452.63Show/hide
Query:  GVCNQKIGECLTEP---EMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-PANSYDRGCEVITRC
        G C   IGEC+ E    E++SE++RR+L   KKYISY  L+++ VPC+R G SYY C  G  AN Y RGC  ITRC
Subjt:  GVCNQKIGECLTEP---EMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-PANSYDRGCEVITRC

Q9LK37 Protein RALF-like 242.5e-2554.24Show/hide
Query:  LILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYD
        L L+ L+++   TH S     + + S+ G EID M     N  IGE   E  M SE SRRV+MM+K+YISY+TL+RDMVPC +PG SYY C SG AN+Y+
Subjt:  LILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYD

Query:  RGCEVITRCARDVHDINT
        RGC VITRCARD +DI T
Subjt:  RGCEVITRCARDVHDINT

Q9MA62 Protein RALF-like 222.0e-1440Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFS--FCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEP---EMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVS
        M     +Y ++ +LA+V      +  F D++  +R+   S    +  G C   I EC+ E    E +S+ SRR+L  QKKYISY  ++R+ VPC+R G S
Subjt:  MAKPSLLYLILILLAVVFQHTHFS--FCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEP---EMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVS

Query:  YYECHSG-PANSYDRGCEVITRCAR
        YY C  G  AN Y RGC  ITRC R
Subjt:  YYECHSG-PANSYDRGCEVITRCAR

Q9SRY3 Protein RALF-like 12.2e-1353.42Show/hide
Query:  CNQKIGECL--TEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-PANSYDRGCEVITRC
        C+  I EC+   E EM+SE +RR+L    KYISY +LKR+ VPC+R G SYY C +G  AN Y RGC  I RC
Subjt:  CNQKIGECL--TEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-PANSYDRGCEVITRC

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.5e-1453.42Show/hide
Query:  CNQKIGECL--TEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-PANSYDRGCEVITRC
        C+  I EC+   E EM+SE +RR+L    KYISY +LKR+ VPC+R G SYY C +G  AN Y RGC  I RC
Subjt:  CNQKIGECL--TEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-PANSYDRGCEVITRC

AT3G05490.1 ralf-like 221.4e-1540Show/hide
Query:  MAKPSLLYLILILLAVVFQHTHFS--FCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEP---EMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVS
        M     +Y ++ +LA+V      +  F D++  +R+   S    +  G C   I EC+ E    E +S+ SRR+L  QKKYISY  ++R+ VPC+R G S
Subjt:  MAKPSLLYLILILLAVVFQHTHFS--FCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEP---EMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVS

Query:  YYECHSG-PANSYDRGCEVITRCAR
        YY C  G  AN Y RGC  ITRC R
Subjt:  YYECHSG-PANSYDRGCEVITRCAR

AT3G23805.1 ralf-like 241.8e-2654.24Show/hide
Query:  LILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYD
        L L+ L+++   TH S     + + S+ G EID M     N  IGE   E  M SE SRRV+MM+K+YISY+TL+RDMVPC +PG SYY C SG AN+Y+
Subjt:  LILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYD

Query:  RGCEVITRCARDVHDINT
        RGC VITRCARD +DI T
Subjt:  RGCEVITRCARDVHDINT

AT4G13950.1 ralf-like 311.5e-2563.64Show/hide
Query:  EIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYDRGCEVITRCARDVHDINT
        EID M   + N  IGE   E  M +E SRRVLM QK+YI Y+TL+RDMVPC +PG SYY+C SG ANSY RGC+ ITRCARD +DINT
Subjt:  EIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYDRGCEVITRCARDVHDINT

AT4G15800.1 ralf-like 333.5e-1440.52Show/hide
Query:  ILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-P
        + I++A++  H  F+   +        G  + + +K  CN  I EC       E EM+SE +RR+L    KYISY  L+R+ VPC+R G SYY C  G  
Subjt:  ILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSG-P

Query:  ANSYDRGCEVITRCAR
        AN Y RGC  ITRC R
Subjt:  ANSYDRGCEVITRCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACCCAGTCTCCTCTACCTTATTCTCATCCTCTTGGCTGTTGTTTTCCAGCACACCCATTTCTCATTCTGCGATGCGATTCTTCATCTCAGATCTTTGAAGGG
CAGCGAAATCGATGTAATGGCAAAAGGGGTTTGCAACCAGAAGATCGGGGAGTGCCTGACTGAGCCAGAAATGGAGTCGGAAACCAGTAGAAGGGTCCTGATGATGCAGA
AGAAGTATATAAGCTACGATACTCTTAAGAGGGACATGGTCCCTTGCACAAGGCCAGGGGTTTCATATTATGAATGCCATTCTGGGCCTGCAAATTCCTACGACAGAGGC
TGTGAGGTCATTACTAGATGCGCTAGAGATGTGCACGACATTAACACT
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACCCAGTCTCCTCTACCTTATTCTCATCCTCTTGGCTGTTGTTTTCCAGCACACCCATTTCTCATTCTGCGATGCGATTCTTCATCTCAGATCTTTGAAGGG
CAGCGAAATCGATGTAATGGCAAAAGGGGTTTGCAACCAGAAGATCGGGGAGTGCCTGACTGAGCCAGAAATGGAGTCGGAAACCAGTAGAAGGGTCCTGATGATGCAGA
AGAAGTATATAAGCTACGATACTCTTAAGAGGGACATGGTCCCTTGCACAAGGCCAGGGGTTTCATATTATGAATGCCATTCTGGGCCTGCAAATTCCTACGACAGAGGC
TGTGAGGTCATTACTAGATGCGCTAGAGATGTGCACGACATTAACACT
Protein sequenceShow/hide protein sequence
MAKPSLLYLILILLAVVFQHTHFSFCDAILHLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYDRG
CEVITRCARDVHDINT