; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005647 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005647
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWerner Syndrome-like exonuclease
Genome locationscaffold254:532715..535077
RNA-Seq ExpressionMS005647
SyntenyMS005647
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR002562 - 3'-5' exonuclease domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597271.1 Werner Syndrome-like exonuclease, partial [Cucurbita argyrosperma subsp. sororia]9.5e-13279.87Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEFP  S  AGAS  LSV SS  SS SFS+SEFDQPFTEQQLQ I+AIEA YQ+T+ KRRR      ENE SCVSP++GRRLP S+ SLQ P+SSPLSP 
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RV SKMRFPAL FDGRI+YSRTASEVDRASRELAKKI+S RKG DQITIGFDIEWKPTFRRGVPPGK AVMQLCLD+SQCHVMHIIHSGI  SL+ LLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTL+KAGVGI NDA+KVFKDYNVSIKAV EIS+LANQKLAGVP+KW L SLT+AL+SKEL KP+KIRLGNWEVAVLSK+QL YAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSERD
        FP  QK  DSE D
Subjt:  FPHAQKVEDSERD

KAG7028742.1 Werner Syndrome-like exonuclease [Cucurbita argyrosperma subsp. argyrosperma]7.3e-13280.19Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEFP  S  AGAS  LSV SS  SS SFS+SEFDQPFTEQQLQ I+AIEA YQ+T+ KRRR      ENE SCVSP++GRRLP SI SLQ P+SSPLSP 
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RV SKMRFPAL FDGRI+YSRTASEVDRASRELAKKI+S RKG DQITIGFDIEWKPTFRRGVPPGK AVMQLCLD+SQCHVMHIIHSGI  SL+ LLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTL+KAGVGI NDA+KVFKDYNVSIKAV EIS+LANQKLAGVP+KW L SLT+AL+SKEL KP+KIRLGNWEVAVLSK+QL YAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSERD
        FP  QK  DSE D
Subjt:  FPHAQKVEDSERD

XP_008438323.1 PREDICTED: Werner Syndrome-like exonuclease [Cucumis melo]6.2e-13177.81Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEFPG S +  +S  LS  SSSF S SFS SEFDQPFTEQQLQ I+AIEA YQSTS K+RR +ST DEN  SCVSPN GRRLP SI S Q P+ SPLS  
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RVNSKMRFPAL++ GRIIYSRT SEVDRASRELAKKI+STRKG +QITIGFDIEW+P+F+RGVPPGK AVMQLCL+NS+CHVMHIIHSGI  SL+ LLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTLNKAGVGIA+DA KVFKDYNVS+K + EISDLANQKLAGVP+KWGL +LT+ L+SKEL+KP++IRLGNWEVAVLSK+QL YAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSE
        FPH +KV DSE
Subjt:  FPHAQKVEDSE

XP_022147109.1 Werner Syndrome-like exonuclease [Momordica charantia]1.8e-17099.04Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RVNSKMRFPALNFDGRIIYS TASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTL+KAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGL SLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSERDM
        FPHAQKVEDSERDM
Subjt:  FPHAQKVEDSERDM

XP_038897657.1 Werner Syndrome-like exonuclease [Benincasa hispida]1.0e-13382.69Show/hide
Query:  MEFPGCSRNAG-ASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSP
        MEF  CS N G +S  LSV SSS SS SFS SEFDQPFTEQQLQEI+AIEA YQSTS K+RR +ST DENE SCVSP+ GRRLP SILS Q P+SSPLSP
Subjt:  MEFPGCSRNAG-ASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSP

Query:  RRVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLE
         RVNSKMRFPALNF GRIIYSRT SEVDRASRELAKKI+S RKG DQITIGFDIEWKPTFRRGVPPGK AVMQLCLDNSQCHVMHIIHSGI  SL+ LLE
Subjt:  RRVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLE

Query:  DDTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILK
        DDTL KAGVGI NDA KV KDYNVSIKAV EISD+ANQKLAG P+KW L SLT+ L+SKELQKPNKIRLGNWEVAVLS +QLQYAATDAFASWYLHEILK
Subjt:  DDTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILK

Query:  GFPHAQKVEDSE
        GFPHAQKV D E
Subjt:  GFPHAQKVEDSE

TrEMBL top hitse value%identityAlignment
A0A0A0L9B9 3'-5' exonuclease domain-containing protein3.3e-13077.49Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEF G S ++ +S  LS  SSSF   SFS SEFDQPFTEQQLQ I+AIEA YQSTS K+RR +ST D NE SCVSP+ GRRLP SI S Q P  SPLSP 
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RVNSKMRFPALN+ GRIIYSRT SEVDRASRELAKKI+STRK  DQITIGFDIEW+P+F+RGVPPGK AVMQLCL+NS+CHVMHIIHSGI  SL+ LLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTL+KAGVGIA+DA KVFK+YNVS+K ++EISDLANQKLAGVP+KWGL +LT+ L+SKELQKP++IRLGNWEVAVLSK QLQYAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSE
        FPH +KV DSE
Subjt:  FPHAQKVEDSE

A0A1S3AWQ6 Werner Syndrome-like exonuclease3.0e-13177.81Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEFPG S +  +S  LS  SSSF S SFS SEFDQPFTEQQLQ I+AIEA YQSTS K+RR +ST DEN  SCVSPN GRRLP SI S Q P+ SPLS  
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RVNSKMRFPAL++ GRIIYSRT SEVDRASRELAKKI+STRKG +QITIGFDIEW+P+F+RGVPPGK AVMQLCL+NS+CHVMHIIHSGI  SL+ LLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTLNKAGVGIA+DA KVFKDYNVS+K + EISDLANQKLAGVP+KWGL +LT+ L+SKEL+KP++IRLGNWEVAVLSK+QL YAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSE
        FPH +KV DSE
Subjt:  FPHAQKVEDSE

A0A5A7TZU7 Werner Syndrome-like exonuclease4.8e-12977.78Show/hide
Query:  CSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSK
        CS +  +S  LS  SSSF S SFS SEFDQPFTEQQLQ I+AIEA YQSTS K+RR +ST DEN  SCVSPN GRRLP SI S Q P+ SPLS  RVNSK
Subjt:  CSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSK

Query:  MRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNK
        MRFPAL++ GRIIYSRT SEVDRASRELAKKI+STRKG +QITIGFDIEW+P+F+RGVPPGK AVMQLCL+NS+CHVMHIIHSGI  SL+ LLEDDTLNK
Subjt:  MRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNK

Query:  AGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFPHAQ
        AGVGIA+DA KVFKDYNVS+K + EISDLANQKLAGVP+KWGL +LT+ L+SKEL+KP++IRLGNWEVAVLSK+QL YAATDAFASWYLHEILKGFPH +
Subjt:  AGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFPHAQ

Query:  KVEDSE
        KV DSE
Subjt:  KVEDSE

A0A6J1D021 Werner Syndrome-like exonuclease8.6e-17199.04Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RVNSKMRFPALNFDGRIIYS TASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTL+KAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGL SLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSERDM
        FPHAQKVEDSERDM
Subjt:  FPHAQKVEDSERDM

A0A6J1G5L3 Werner Syndrome-like exonuclease3.9e-13179.87Show/hide
Query:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR
        MEFP  S  AGAS  LSV SS  SS SFS+SEFDQPFTEQQLQ I+AIEA YQ+T+ KRRR      ENE  CVSPN+GRRLP SI SLQ P+SSPLSP 
Subjt:  MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPR

Query:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED
        RV SKMRFPAL F GRI+YSRTASEVDRASRELAKKI+S RKG DQITIGFDIEWKPTFRRGVPPGK AVMQLCLD+SQCHVMHIIHSGI  SL+ LLED
Subjt:  RVNSKMRFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLED

Query:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        DTLNKAGVGI NDA+KVFKDYNVSIKAV EIS+LANQKLAGVP+KW L SLT+AL+SKEL KP+KIRLGNWEVAVLSK+QL YAATDAFASWYLHEILKG
Subjt:  DTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Query:  FPHAQKVEDSERD
        FP  Q   DSE D
Subjt:  FPHAQKVEDSERD

SwissProt top hitse value%identityAlignment
B3NZ68 Werner Syndrome-like exonuclease1.4e-1625.71Show/hide
Query:  RFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPS-LKTLLEDDTLNK
        + P + + G I Y   + ++  ++ ++ + +   ++  + + + FD+EW  +F+ G  PGK+AV+Q+C+D   C++  + +    P+ L  L+    +  
Subjt:  RFPALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPS-LKTLLEDDTLNK

Query:  AGVGIANDAVKVFKDY-NVSIK-AVSEISDLA--NQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGF
         GV I ND  K+ +D+  VS +  + +  DL     ++     +W LE LT  +  K + K  K+R+  W V  L + QL YAA D +    ++  L+  
Subjt:  AGVGIANDAVKVFKDY-NVSIK-AVSEISDLA--NQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGF

Query:  PHAQKVEDSE
          A+ + + E
Subjt:  PHAQKVEDSE

O09053 Werner syndrome ATP-dependent helicase homolog6.4e-3037.17Show/hide
Query:  PALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITP-SLKTLLEDDTLNKAG
        P L F G I+YS  AS+    S +++ ++S      D   +GFD+EW P ++ G    + AV+QLC+  S+C++ HI    + P  LK LLE+ ++ KAG
Subjt:  PALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITP-SLKTLLEDDTLNKAG

Query:  VGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEIL
        VGI  D  K+ +D++V +++  E++D+AN+KL    + W L  L K ++ K+L K   IR  NW    L++ Q  YAATDA+A   +++ L
Subjt:  VGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEIL

O93530 Werner syndrome ATP-dependent helicase homolog2.2e-3035.23Show/hide
Query:  PALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHII-HSGITPSLKTLLEDDTLNKAG
        P + F+G I+YS  +++    S ++   +       ++  +GFDIEW P + +G   GK A++Q+C+   +C++ HI   +G    LK LLED+++ K G
Subjt:  PALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHII-HSGITPSLKTLLEDDTLNKAG

Query:  VGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG
        VGI  D  K+  DY + +K   E+S++ANQKL    +KW    L K L  ++L K    R  NW++ +L++ Q  YAATDA+A   +++ L+G
Subjt:  VGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKG

Q14191 Werner syndrome ATP-dependent helicase1.5e-3138.54Show/hide
Query:  PALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITP-SLKTLLEDDTLNKAG
        P L F G I+YS  AS+    S +++  +S      D   +GFD+EW P + RG   GK A++QLC+  S+C++ H+    + P  LK LLE+  + KAG
Subjt:  PALNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITP-SLKTLLEDDTLNKAG

Query:  VGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILK
        VGI  D  K+ +D+++ +K   E++D+AN+KL    + W L SL K L+ K+L K   IR  NW    L++ Q  YAATDA+A + ++  L+
Subjt:  VGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILK

Q84LH3 Werner Syndrome-like exonuclease5.3e-6950.18Show/hide
Query:  DQPFTEQQLQEIDAIEAMYQSTSGKRRRGSST----------ADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSKMRFPALNFDGRIIYSRTA
        D  FTE++L  IDAIEA Y  +       S+             E + + +  N  R+LP SI S       PLS  R  +   FPA+ F GRI+YS+TA
Subjt:  DQPFTEQQLQEIDAIEAMYQSTSGKRRRGSST----------ADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSKMRFPALNFDGRIIYSRTA

Query:  SEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNKAGVGIANDAVKVFKDYNV
        +EVD+ + +L K + + R  +    +G DIEW+P+FR+GV PGK A +Q+C+D++ C VMHI HSGI  SL+ L+ED TL K G+GI  D+VK+F DY V
Subjt:  SEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNKAGVGIANDAVKVFKDYNV

Query:  SIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFPHA
        SIK V ++SDLANQK+ G  +KWGL SLT+ LV KEL KPN+IRLGNWE   LSKQQLQYAATDA+ASW+L+++LK  P A
Subjt:  SIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFPHA

Arabidopsis top hitse value%identityAlignment
AT1G56310.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.0e-0725Show/hide
Query:  KISSTRKGTDQI----TIGFDIEWKPTFRRGVPPGKTAVMQLCLD------------NSQCHVM-----HIIHSGITPSLKTLLEDDTLNKAGVGIANDA
        +++  RK T  +     +G D EWKP + +G    K ++MQ+  D            N    ++     HI+ S  T  L    + D    A   ++   
Subjt:  KISSTRKGTDQI----TIGFDIEWKPTFRRGVPPGKTAVMQLCLD------------NSQCHVM-----HIIHSGITPSLKTLLEDDTLNKAGVGIANDA

Query:  VKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFP
        +K F+ Y++ +    +I ++ N+         GL  LTK ++   L K    R  +WE   LS+ QL+YAA DA    ++   ++  P
Subjt:  VKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFP

AT4G13870.1 Werner syndrome-like exonuclease1.0e-6750.18Show/hide
Query:  DQPFTEQQLQEIDAIEAMYQSTSGKRRRGSST----------ADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSKMRFPALNFDGRIIYSRTA
        D  FTE++L  IDAIEA Y  +       S+             E + + +  N  R+LP SI S       PLS  R  +   FPA+ F GRI+YS+TA
Subjt:  DQPFTEQQLQEIDAIEAMYQSTSGKRRRGSST----------ADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSKMRFPALNFDGRIIYSRTA

Query:  SEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNKAGVGIANDAVKVFKDYNV
        +EVD+ + +L K + + R  +    +G DIEW+P+FR+GV PGK A +Q+C+D++ C VMHI HSGI  SL+ L+ED TL K G+GI  D+VK+F DY V
Subjt:  SEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNKAGVGIANDAVKVFKDYNV

Query:  SIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEIL
        SIK V ++SDLANQK+ G  +KWGL SLT+ LV KEL KPN+IRLGNWE   LSKQQLQYAATDA+ASW+L++ L
Subjt:  SIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEIL

AT4G13870.2 Werner syndrome-like exonuclease3.8e-7050.18Show/hide
Query:  DQPFTEQQLQEIDAIEAMYQSTSGKRRRGSST----------ADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSKMRFPALNFDGRIIYSRTA
        D  FTE++L  IDAIEA Y  +       S+             E + + +  N  R+LP SI S       PLS  R  +   FPA+ F GRI+YS+TA
Subjt:  DQPFTEQQLQEIDAIEAMYQSTSGKRRRGSST----------ADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSKMRFPALNFDGRIIYSRTA

Query:  SEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNKAGVGIANDAVKVFKDYNV
        +EVD+ + +L K + + R  +    +G DIEW+P+FR+GV PGK A +Q+C+D++ C VMHI HSGI  SL+ L+ED TL K G+GI  D+VK+F DY V
Subjt:  SEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNKAGVGIANDAVKVFKDYNV

Query:  SIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFPHA
        SIK V ++SDLANQK+ G  +KWGL SLT+ LV KEL KPN+IRLGNWE   LSKQQLQYAATDA+ASW+L+++LK  P A
Subjt:  SIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFPHA

AT4G13885.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.5e-1845.05Show/hide
Query:  LKTLLEDDTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWY
        L+ L+ED TL K G+GI  D+VK+F DY                                      L KPN+IRLGNWEV  LSKQQLQYAATDA+ASW+
Subjt:  LKTLLEDDTLNKAGVGIANDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWY

Query:  LHEILKGFPHA
        LH++LK  P A
Subjt:  LHEILKGFPHA

AT5G48350.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-0625.26Show/hide
Query:  TASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHI----------IHSGITPSLKTLLEDDTLNKAGVGIA
        T +E +R    L K   S +    +I IG D E     ++G    KT ++QLC D   C ++ +              +   L   L        G+GI 
Subjt:  TASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHI----------IHSGITPSLKTLLEDDTLNKAGVGIA

Query:  NDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLT-------KALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEIL
           +++  ++ ++ K V EI           P  W L ++T        A+VS E  +P+   L +WE  VL+K Q++ AA++A+ ++ +  IL
Subjt:  NDAVKVFKDYNVSIKAVSEISDLANQKLAGVPQKWGLESLT-------KALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCCCCGGTTGCAGCAGGAATGCCGGCGCTTCGCCGCCGCTCTCCGTCTCTTCCTCCTCCTTCTCGTCGCGTTCGTTCTCTGTCTCGGAGTTCGATCAGCCTTT
TACAGAGCAACAACTTCAGGAAATCGATGCCATCGAAGCTATGTATCAATCCACCAGCGGCAAAAGACGACGAGGAAGTTCCACAGCCGACGAAAACGAGGCCTCGTGTG
TTTCCCCCAACGCCGGCCGTCGATTGCCCCATTCCATTCTTTCTCTCCAGCTTCCTTATTCTTCTCCTCTATCGCCCCGTCGAGTAAATTCGAAGATGAGATTTCCTGCA
TTGAATTTTGATGGCCGAATTATTTACAGTAGAACTGCGAGTGAGGTAGATAGAGCGTCCAGGGAGTTAGCCAAGAAAATCAGCTCCACGAGGAAAGGAACGGATCAAAT
TACTATCGGATTCGACATCGAGTGGAAACCCACATTTAGAAGAGGTGTTCCACCCGGAAAGACAGCAGTCATGCAACTATGCTTGGACAATTCTCAATGCCATGTGATGC
ATATCATTCATTCGGGAATAACCCCAAGTTTGAAGACTCTTCTTGAGGATGATACACTCAACAAGGCTGGAGTTGGCATTGCCAATGATGCTGTGAAAGTTTTTAAAGAT
TATAATGTGTCTATCAAAGCAGTGAGCGAGATTTCAGATCTAGCTAATCAAAAGCTTGCTGGAGTTCCCCAAAAATGGGGTCTTGAGTCTCTAACTAAGGCGCTTGTATC
AAAAGAGCTTCAAAAGCCCAACAAAATCAGACTTGGAAACTGGGAGGTCGCTGTGCTATCAAAGCAGCAACTGCAGTATGCTGCCACAGACGCATTTGCTTCTTGGTACT
TACATGAGATCTTAAAAGGATTTCCGCATGCTCAAAAAGTAGAAGATTCAGAGAGAGATATG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCCCCGGTTGCAGCAGGAATGCCGGCGCTTCGCCGCCGCTCTCCGTCTCTTCCTCCTCCTTCTCGTCGCGTTCGTTCTCTGTCTCGGAGTTCGATCAGCCTTT
TACAGAGCAACAACTTCAGGAAATCGATGCCATCGAAGCTATGTATCAATCCACCAGCGGCAAAAGACGACGAGGAAGTTCCACAGCCGACGAAAACGAGGCCTCGTGTG
TTTCCCCCAACGCCGGCCGTCGATTGCCCCATTCCATTCTTTCTCTCCAGCTTCCTTATTCTTCTCCTCTATCGCCCCGTCGAGTAAATTCGAAGATGAGATTTCCTGCA
TTGAATTTTGATGGCCGAATTATTTACAGTAGAACTGCGAGTGAGGTAGATAGAGCGTCCAGGGAGTTAGCCAAGAAAATCAGCTCCACGAGGAAAGGAACGGATCAAAT
TACTATCGGATTCGACATCGAGTGGAAACCCACATTTAGAAGAGGTGTTCCACCCGGAAAGACAGCAGTCATGCAACTATGCTTGGACAATTCTCAATGCCATGTGATGC
ATATCATTCATTCGGGAATAACCCCAAGTTTGAAGACTCTTCTTGAGGATGATACACTCAACAAGGCTGGAGTTGGCATTGCCAATGATGCTGTGAAAGTTTTTAAAGAT
TATAATGTGTCTATCAAAGCAGTGAGCGAGATTTCAGATCTAGCTAATCAAAAGCTTGCTGGAGTTCCCCAAAAATGGGGTCTTGAGTCTCTAACTAAGGCGCTTGTATC
AAAAGAGCTTCAAAAGCCCAACAAAATCAGACTTGGAAACTGGGAGGTCGCTGTGCTATCAAAGCAGCAACTGCAGTATGCTGCCACAGACGCATTTGCTTCTTGGTACT
TACATGAGATCTTAAAAGGATTTCCGCATGCTCAAAAAGTAGAAGATTCAGAGAGAGATATG
Protein sequenceShow/hide protein sequence
MEFPGCSRNAGASPPLSVSSSSFSSRSFSVSEFDQPFTEQQLQEIDAIEAMYQSTSGKRRRGSSTADENEASCVSPNAGRRLPHSILSLQLPYSSPLSPRRVNSKMRFPA
LNFDGRIIYSRTASEVDRASRELAKKISSTRKGTDQITIGFDIEWKPTFRRGVPPGKTAVMQLCLDNSQCHVMHIIHSGITPSLKTLLEDDTLNKAGVGIANDAVKVFKD
YNVSIKAVSEISDLANQKLAGVPQKWGLESLTKALVSKELQKPNKIRLGNWEVAVLSKQQLQYAATDAFASWYLHEILKGFPHAQKVEDSERDM