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MS005672 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005672
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMalic enzyme
Genome locationscaffold254:696964..697117
RNA-Seq ExpressionMS005672
SyntenyMS005672
Gene Ontology termsGO:0006090 - pyruvate metabolic process (biological process)
GO:0006108 - malate metabolic process (biological process)
GO:0004471 - malate dehydrogenase (decarboxylating) (NAD+) activity (molecular function)
GO:0042803 - protein homodimerization activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR012301 - Malic enzyme, N-terminal domain
IPR037062 - Malic enzyme, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8028675.1 hypothetical protein BT93_E1352 [Corymbia citriodora subsp. variegata]1.2e-1590.2Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIA+I+EYA I YT TVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

KCW73248.1 hypothetical protein EUGRSUZ_E017132 [Eucalyptus grandis]1.2e-1590.2Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIA+I+EYA I YT TVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

XP_022147088.1 NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Momordica charantia]3.1e-1692.16Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIAHIEEYA I YT TVGLVCQNY GLFRRPRGMYFSAADRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

XP_038875079.1 NAD-dependent malic enzyme 62 kDa isoform, mitochondrial isoform X1 [Benincasa hispida]2.3e-1692.16Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIAHIEEYA I YT TVGLVCQNYGGLFRRPRGMYFSA DRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

XP_038875085.1 NAD-dependent malic enzyme 62 kDa isoform, mitochondrial isoform X2 [Benincasa hispida]2.3e-1692.16Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIAHIEEYA I YT TVGLVCQNYGGLFRRPRGMYFSA DRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

TrEMBL top hitse value%identityAlignment
A0A059C453 Malic enzyme5.6e-1690.2Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIA+I+EYA I YT TVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

A0A059C4F9 Malic enzyme (Fragment)5.6e-1690.2Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIA+I+EYA I YT TVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

A0A6J1D0B1 Malic enzyme1.5e-1692.16Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIAHIEEYA I YT TVGLVCQNY GLFRRPRGMYFSAADRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

A0A6J1IQW3 Malic enzyme5.6e-1690.2Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIAHIEEYA I YT TVGLVCQNY GLFRRPRGMYFSA DRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

A0A6J1IYS7 Malic enzyme5.6e-1690.2Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLIAHIEEYA I YT TVGLVCQNY GLFRRPRGMYFSA DRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

SwissProt top hitse value%identityAlignment
P37221 NAD-dependent malic enzyme 62 kDa isoform, mitochondrial4.1e-1682.35Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VL+ +IEEYA I YT TVGLVCQ Y GLFRRPRGMYFSA DRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

P37224 NAD-dependent malic enzyme 65 kDa isoform, mitochondrial3.0e-1476.47Show/hide
Query:  VLIAHIEEYAAIY-TATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLI +IEEYA I  T TVGLVCQ + GL+RRPRGMYFS+ DRGEMMSMVYN
Subjt:  VLIAHIEEYAAIY-TATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

P37225 NAD-dependent malic enzyme 59 kDa isoform, mitochondrial7.8e-1574.51Show/hide
Query:  VLIAHIEEYA-AIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLI +I+++A  IYT TVGLVCQNY GLFRRPRGMYFSA D+GEMMSM++N
Subjt:  VLIAHIEEYA-AIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

Q8L7K9 NAD-dependent malic enzyme 2, mitochondrial6.0e-1574.51Show/hide
Query:  VLIAHIEEYA-AIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLI +I+++A  IYT TVGLVCQNY GL+RRPRGMYFSA D+GEMMSM+YN
Subjt:  VLIAHIEEYA-AIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

Q9SIU0 NAD-dependent malic enzyme 1, mitochondrial4.9e-1786.27Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLI +IEEYA I YT TVGLVCQNY GLFRRPRGMYFSA DRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

Arabidopsis top hitse value%identityAlignment
AT2G13560.1 NAD-dependent malic enzyme 13.5e-1886.27Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLI +IEEYA I YT TVGLVCQNY GLFRRPRGMYFSA DRGEMMSMVYN
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

AT2G19900.1 NADP-malic enzyme 14.7e-0743.14Show/hide
Query:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        +LI ++EE   I YT TVG  CQ +G +FRRP+G++ S  D+G+++ ++ N
Subjt:  VLIAHIEEYAAI-YTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

AT4G00570.1 NAD-dependent malic enzyme 24.3e-1674.51Show/hide
Query:  VLIAHIEEYA-AIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        VLI +I+++A  IYT TVGLVCQNY GL+RRPRGMYFSA D+GEMMSM+YN
Subjt:  VLIAHIEEYA-AIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

AT5G11670.1 NADP-malic enzyme 24.7e-0741.18Show/hide
Query:  VLIAHIEE-YAAIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        +LI ++EE    +YT TVG  CQ YG +FR+P+G+Y S  ++G+++ ++ N
Subjt:  VLIAHIEE-YAAIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN

AT5G25880.1 NADP-malic enzyme 33.6e-0741.18Show/hide
Query:  VLIAHIEE-YAAIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN
        +LI ++EE    +YT TVG  CQ YG ++RRP+G+Y S  ++G+++ ++ N
Subjt:  VLIAHIEE-YAAIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTTGATTGCTCACATTGAGGAGTATGCAGCAATTTACACAGCAACTGTAGGTCTCGTTTGCCAGAATTATGGTGGCTTGTTTAGAAGACCAAGGGGAATGTATTTCAG
TGCAGCCGATCGTGGAGAAATGATGTCTATGGTTTATAAT
mRNA sequenceShow/hide mRNA sequence
GTTTTGATTGCTCACATTGAGGAGTATGCAGCAATTTACACAGCAACTGTAGGTCTCGTTTGCCAGAATTATGGTGGCTTGTTTAGAAGACCAAGGGGAATGTATTTCAG
TGCAGCCGATCGTGGAGAAATGATGTCTATGGTTTATAAT
Protein sequenceShow/hide protein sequence
VLIAHIEEYAAIYTATVGLVCQNYGGLFRRPRGMYFSAADRGEMMSMVYN