CuGenDBv2

Gene ID	MS005696
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Genome location	scaffold254:892959..894839
RNA-Seq Expression	MS005696
Synteny	MS005696
Gene Ontology terms	GO:0005515 - protein binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR002885 - Pentatricopeptide repeat IPR011990 - Tetratricopeptide-like helical domain superfamily IPR032867 - DYW domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008438231.2 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucumis melo]

0.0e+00

86.6

Show/hide

Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        + YAYS+F+HT+E +ILTWNTMLRGFV+S+MPRRALQSY EML  S NVPDRFTFPSLLKGCA  L+FKVGKILHGQVVKYML SDLY+ETTLLNMYAAC
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDL SARLLFE+MGHRNKVVWTSMISGYT+N CPNEALLLYEKMEEDGFSPDEVTMATLVSACAEL+DLGVGMKLHS IRE  MKICAVLGSALV+MYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFDHLS++DVYAWSALIFGYVKNNRS EALQLFRE+A  SNMRPNEVTILAV+SACAQLGDLETGRW+HDYI RTQ D SVSL+NSL DM+
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCG+ID AK+IF+SMS RDLISWNS++NGLALHGLGREALA+F  M+TTDL PD+IT IGVLTACSHAGLVQEGKK F+E++ALYGIR KLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAGLLAEAREFIR MPL+PNGAIWGSMLGACRVYNN+ELGEEAARCLL+LEPTNDGVYILLSNIYARRKMWNEVKK+RELMNE+GIQKTPGCSS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN+ HSFLAGDCSHPET EIF+ML QV+EKLKLAGYVAD SEVL NI+D+KKEESVSQHSEKLALCYGLLKSK GGRIVILKNLRVCSDCHT IKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        Y+RQIT+RDRNRFHHFKDGSCSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

XP_022147145.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Momordica charantia]

0.0e+00

99.68

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDL VGMKLHSRIRETGMKICAVLGSALVDMYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        AKCGEIDVAKKIF+SMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        YRRQITVRDRNRFHHFKDGSCSCRNYW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

XP_022924289.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata]

0.0e+00

84.85

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        +AYAYS+F+HT+E +ILTWNTMLRGFV+SDMPRRAL+SYIEML WS  VPDRFTFPSLLKGCA  L+FKVGK+LHGQ+VKY LDSDLY+ETTLLNMYA+C
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDLNSAR LFEKMGHRNKVVWTSMISGYTRN CPNEAL++YEKM EDGFSPDEVTM TLVSA AEL+DLGVGMKLHSRI+E GMKICAVLGSALVDMYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFD++SER+VY +SALIFGYVKNNRS EALQLF+E+ G+SN+RPN+VT LAVVSACAQLGDLETGRWIHDYI RT+ D SVSLSN+L DMY
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCGEID AK+IF+SMSKRDLISWNSL+NGLALHGLGREAL R R M+ TDL+PD+IT IGVLTACSHAGLVQEGKK FHEM+ALYGIRPKLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAG L EAREFI+AMPL+PNGAIWG+MLGACRVYN++ELGEE+ RCLLELEPTNDGVYILLSNIYA+R+MWNEVKK+RELMNE+GIQKTPG SS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN+THSFLAGDCSHPE TEIF ML QVREKLK AGYVADISEVL NI+D+KKEESVSQHSEKLALCYGLLKSK G +IVILKNLRVCSDCHT IKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        YRRQI VRDR RFHHFKDG CSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

XP_022979588.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima]

0.0e+00

85.01

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        +AYAYS+F+HT E +ILTWNTMLRGFV+SDMPRRAL+SYIEML WS  VPDRFTFPSLLKGCA  L+FKVGK+LHGQ+VK  L SDLY+ETTLLNMYA+C
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDLNSAR LFEKMGHRNKVVWTSMISGYTRN CP EAL++YEKM EDGFSPDEVTMATLVSA AEL+DLGVGMKLHSRI+E GMKICAVLGSALVDMYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFD++SER+VY +SALIFGYVKNNRS EALQLFRE+ G+SN+ PNEVTILAVVSACAQLGDLETGRWIHDYI RT+ D SVSLSN+L DMY
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCGEID AK+IF+SMSKRDLISWNSL+NGLALHGLGREAL R R M+ TDL+PD+IT IG+LTACSHAGLVQEGKK FHEM+ALYGIRPKLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAG L EAREFI+AMPL+PNGAIWG+MLGACRVYN++ELGEE+ARCLLELEPTNDGVYILLSNIYARRKMWNEVKK+RELMNE+GIQKTPG SS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN+THSFLAGDCSHPE TEIF ML QVREKLK AGYVADISEVL NI+D+KKEESVSQHSEKLALCYGLLKSK G +IVILKNLRVCSDCHT IKL+SKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        YRRQIT+RDR RFHHFKDG CSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

XP_038906564.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida]

0.0e+00

86.28

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        + YAYS+F+HTQE +ILTWNTMLRGFV+S+MPRRALQSYIEML  S N+PDRFTFPSLLKGCA LL+FKVGKILHGQV+KYMLDSDLY+ETTLLNMYAAC
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDLNSAR LFEKMGHRNKVVWTSMISGYT+N CPNEALLLYEKMEEDGF PDEVTMATLVSACAE++DLGVGMKLHSRIRE GMKICAVLGSALVDMYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFDHLSERDVYAWSALIFGYVKNN+S +AL LFRE++  SNM PNEVTILAVVSACAQLGDLETGRW+HDYI RTQ D SVSLSNSL DM+
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCG+ID A++IF+ MSKRDLISWNS++NG ALHGLGREAL +F  M+TTDL+PD+IT IGVLTACSHAGLVQEGKK FHEM+ALYGIRPKLEHYGCM+D
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAGLLAEAR+FI+ MPL+PNGAIWGSMLGACRVYNN+ELGEEAARCLLELEP NDGVYILLSNIYARR++WNEVKK+RELMNE+GIQKTPGCSS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN THSFLAGDCSHPETTEIF+ML QV+EKLKLAGYVADISEVL NI+D+KKEESV QHSEKLALCYGLLKSK GGRIVILKNLRVCSDCHT IKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        Y+RQI VRDRNRFHHF+DG CSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AVZ9 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like

0.0e+00

86.6

Show/hide

Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        + YAYS+F+HT+E +ILTWNTMLRGFV+S+MPRRALQSY EML  S NVPDRFTFPSLLKGCA  L+FKVGKILHGQVVKYML SDLY+ETTLLNMYAAC
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDL SARLLFE+MGHRNKVVWTSMISGYT+N CPNEALLLYEKMEEDGFSPDEVTMATLVSACAEL+DLGVGMKLHS IRE  MKICAVLGSALV+MYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFDHLS++DVYAWSALIFGYVKNNRS EALQLFRE+A  SNMRPNEVTILAV+SACAQLGDLETGRW+HDYI RTQ D SVSL+NSL DM+
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCG+ID AK+IF+SMS RDLISWNS++NGLALHGLGREALA+F  M+TTDL PD+IT IGVLTACSHAGLVQEGKK F+E++ALYGIR KLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAGLLAEAREFIR MPL+PNGAIWGSMLGACRVYNN+ELGEEAARCLL+LEPTNDGVYILLSNIYARRKMWNEVKK+RELMNE+GIQKTPGCSS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN+ HSFLAGDCSHPET EIF+ML QV+EKLKLAGYVAD SEVL NI+D+KKEESVSQHSEKLALCYGLLKSK GGRIVILKNLRVCSDCHT IKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        Y+RQIT+RDRNRFHHFKDGSCSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

A0A5A7U1H5 Pentatricopeptide repeat-containing protein

0.0e+00

86.6

Show/hide

Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        + YAYS+F+HT+E +ILTWNTMLRGFV+S+MPRRALQSY EML  S NVPDRFTFPSLLKGCA  L+FKVGKILHGQVVKYML SDLY+ETTLLNMYAAC
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDL SARLLFE+MGHRNKVVWTSMISGYT+N CPNEALLLYEKMEEDGFSPDEVTMATLVSACAEL+DLGVGMKLHS IRE  MKICAVLGSALV+MYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFDHLS++DVYAWSALIFGYVKNNRS EALQLFRE+A  SNMRPNEVTILAV+SACAQLGDLETGRW+HDYI RTQ D SVSL+NSL DM+
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCG+ID AK+IF+SMS RDLISWNS++NGLALHGLGREALA+F  M+TTDL PD+IT IGVLTACSHAGLVQEGKK F+E++ALYGIR KLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAGLLAEAREFIR MPL+PNGAIWGSMLGACRVYNN+ELGEEAARCLL+LEPTNDGVYILLSNIYARRKMWNEVKK+RELMNE+GIQKTPGCSS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN+ HSFLAGDCSHPET EIF+ML QV+EKLKLAGYVAD SEVL NI+D+KKEESVSQHSEKLALCYGLLKSK GGRIVILKNLRVCSDCHT IKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        Y+RQIT+RDRNRFHHFKDGSCSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

A0A6J1CZB8 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like

0.0e+00

99.68

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDL VGMKLHSRIRETGMKICAVLGSALVDMYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        AKCGEIDVAKKIF+SMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        YRRQITVRDRNRFHHFKDGSCSCRNYW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

A0A6J1E8Q8 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like

0.0e+00

84.85

Show/hide

Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        +AYAYS+F+HT+E +ILTWNTMLRGFV+SDMPRRAL+SYIEML WS  VPDRFTFPSLLKGCA  L+FKVGK+LHGQ+VKY LDSDLY+ETTLLNMYA+C
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDLNSAR LFEKMGHRNKVVWTSMISGYTRN CPNEAL++YEKM EDGFSPDEVTM TLVSA AEL+DLGVGMKLHSRI+E GMKICAVLGSALVDMYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFD++SER+VY +SALIFGYVKNNRS EALQLF+E+ G+SN+RPN+VT LAVVSACAQLGDLETGRWIHDYI RT+ D SVSLSN+L DMY
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCGEID AK+IF+SMSKRDLISWNSL+NGLALHGLGREAL R R M+ TDL+PD+IT IGVLTACSHAGLVQEGKK FHEM+ALYGIRPKLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAG L EAREFI+AMPL+PNGAIWG+MLGACRVYN++ELGEE+ RCLLELEPTNDGVYILLSNIYA+R+MWNEVKK+RELMNE+GIQKTPG SS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN+THSFLAGDCSHPE TEIF ML QVREKLK AGYVADISEVL NI+D+KKEESVSQHSEKLALCYGLLKSK G +IVILKNLRVCSDCHT IKLVSKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        YRRQI VRDR RFHHFKDG CSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

A0A6J1IWP4 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like

0.0e+00

85.01

Show/hide

Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        +AYAYS+F+HT E +ILTWNTMLRGFV+SDMPRRAL+SYIEML WS  VPDRFTFPSLLKGCA  L+FKVGK+LHGQ+VK  L SDLY+ETTLLNMYA+C
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDLNSAR LFEKMGHRNKVVWTSMISGYTRN CP EAL++YEKM EDGFSPDEVTMATLVSA AEL+DLGVGMKLHSRI+E GMKICAVLGSALVDMYAK
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY
        CG+LKTARQVFD++SER+VY +SALIFGYVKNNRS EALQLFRE+ G+SN+ PNEVTILAVVSACAQLGDLETGRWIHDYI RT+ D SVSLSN+L DMY
Subjt:  CGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMY

Query:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD
        +KCGEID AK+IF+SMSKRDLISWNSL+NGLALHGLGREAL R R M+ TDL+PD+IT IG+LTACSHAGLVQEGKK FHEM+ALYGIRPKLEHYGCMVD
Subjt:  AKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVD

Query:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI
        LLCRAG L EAREFI+AMPL+PNGAIWG+MLGACRVYN++ELGEE+ARCLLELEPTNDGVYILLSNIYARRKMWNEVKK+RELMNE+GIQKTPG SS+VI
Subjt:  LLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVI

Query:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI
        DN+THSFLAGDCSHPE TEIF ML QVREKLK AGYVADISEVL NI+D+KKEESVSQHSEKLALCYGLLKSK G +IVILKNLRVCSDCHT IKL+SKI
Subjt:  DNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKI

Query:  YRRQITVRDRNRFHHFKDGSCSCRNYW
        YRRQIT+RDR RFHHFKDG CSCR+YW
Subjt:  YRRQITVRDRNRFHHFKDGSCSCRNYW

SwissProt top hits

e value

%identity

Alignment

O23337 Pentatricopeptide repeat-containing protein At4g14820

5.7e-147

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Query:  LAYAYSIFSH-TQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAA
        L+YA ++FS        + +N  LR    S  PR  +  Y + +       D+F+F  +LK  + +     G  LHG   K     D +VET  ++MYA+
Subjt:  LAYAYSIFSH-TQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAA

Query:  CGDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYA
        CG +N AR +F++M HR+ V W +MI  Y R    +EA  L+E+M++    PDE+ +  +VSAC    ++     ++  + E  +++   L +ALV MYA
Subjt:  CGDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYA

Query:  -------------------------------KCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQL
                                       KCG L  A+ +FD   ++D+  W+ +I  YV+++   EAL++F E+   S ++P+ V++ +V+SACA L
Subjt:  -------------------------------KCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQL

Query:  GDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSH
        G L+  +W+H  I     +  +S++N+L +MYAKCG +D  + +F  M +R+++SW+S+IN L++HG   +AL+ F +M+  +++P+++T +GVL  CSH
Subjt:  GDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSH

Query:  AGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIY
        +GLV+EGKK F  M   Y I PKLEHYGCMVDL  RA LL EA E I +MP+  N  IWGS++ ACR++  +ELG+ AA+ +LELEP +DG  +L+SNIY
Subjt:  AGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIY

Query:  ARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYG
        AR + W +V+ IR +M E+ + K  G S I  +  +H FL GD  H ++ EI+  L +V  KLKLAGYV D   VL ++ +++K++ V  HSEKLALC+G
Subjt:  ARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYG

Query:  LLKSKEG------GRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW
        L+  ++       G I I+KNLRVC DCH   KLVSK+Y R+I VRDR RFH +K+G CSCR+YW
Subjt:  LLKSKEG------GRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW

O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic

6.1e-165

40.97

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        L YA  +F    + N   WNT++R +     P  ++ ++++M+  S   P+++TFP L+K  A +    +G+ LHG  VK  + SD++V  +L++ Y +C
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDL+SA  +F  +  ++ V W SMI+G+ +   P++AL L++KME +      VTM  ++SACA++R+L  G ++ S I E  + +   L +A++DMY K
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSE-------------------------------RDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG
        CG ++ A+++FD + E                               +D+ AW+ALI  Y +N +  EAL +F E+    NM+ N++T+++ +SACAQ+G
Subjt:  CGELKTARQVFDHLSE-------------------------------RDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG

Query:  DLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHA
         LE GRWIH YI +    ++  ++++L  MY+KCG+++ ++++FNS+ KRD+  W+++I GLA+HG G EA+  F +M+  ++KP+ +T   V  ACSH 
Subjt:  DLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHA

Query:  GLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYA
        GLV E +  FH+M++ YGI P+ +HY C+VD+L R+G L +A +FI AMP+ P+ ++WG++LGAC+++ N+ L E A   LLELEP NDG ++LLSNIYA
Subjt:  GLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYA

Query:  RRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDK-KEESVSQHSEKLALCYG
        +   W  V ++R+ M   G++K PGCSSI ID + H FL+GD +HP + +++  L +V EKLK  GY  +IS+VLQ I +++ KE+S++ HSEKLA+CYG
Subjt:  RRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDK-KEESVSQHSEKLALCYG

Query:  LLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW
        L+ ++    I ++KNLRVC DCH+  KL+S++Y R+I VRDR RFHHF++G CSC ++W
Subjt:  LLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW

Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic

8.8e-148

40.87

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Query:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL
        A  +F    E ++++WNT++ G+  + M R AL+  ++ +   +  P   T  S+L   + L    VGK +HG  ++   DS + + T L++MYA CG L
Subjt:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL

Query:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE
         +AR LF+ M  RN V W SMI  Y +N+ P EA+L+++KM ++G  P +V++   + ACA+L DL  G  +H    E G+     + ++L+ MY KC E
Subjt:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE

Query:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC
        + TA  +F  L  R + +W+A+I G+ +N R I+AL  F ++  S  ++P+  T ++V++A A+L      +WIH  + R+  D +V ++ +L DMYAKC
Subjt:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC

Query:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC
        G I +A+ IF+ MS+R + +WN++I+G   HG G+ AL  F +M+   +KP+ +T + V++ACSH+GLV+ G K F+ MK  Y I   ++HYG MVDLL 
Subjt:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC

Query:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV
        RAG L EA +FI  MP++P   ++G+MLGAC+++ N+   E+AA  L EL P + G ++LL+NIY    MW +V ++R  M  +G++KTPGCS + I N 
Subjt:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV

Query:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR
         HSF +G  +HP++ +I+  L ++   +K AGYV D + VL  + +D KE+ +S HSEKLA+ +GLL +  G  I + KNLRVC+DCH A K +S +  R
Subjt:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR

Query:  QITVRDRNRFHHFKDGSCSCRNYW
        +I VRD  RFHHFK+G+CSC +YW
Subjt:  QITVRDRNRFHHFKDGSCSCRNYW

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic

1.3e-167

45.3

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        L YA S+F   QE N+L WNTM RG   S  P  AL+ Y+ M+     +P+ +TFP +LK CA    FK G+ +HG V+K   D DLYV T+L++MY   
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHR-------------------------------NKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDL
        G L  A  +F+K  HR                               + V W +MISGY       EAL L++ M +    PDE TM T+VSACA+   +
Subjt:  GDLNSARLLFEKMGHR-------------------------------NKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDL

Query:  GVGMKLHSRIRETGMKICAVLGSALVDMYAKCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG
         +G ++H  I + G      + +AL+D+Y+KCGEL+TA  +F+ L  +DV +W+ LI GY   N   EAL LF+E+  S    PN+VT+L+++ ACA LG
Subjt:  GVGMKLHSRIRETGMKICAVLGSALVDMYAKCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG

Query:  DLETGRWIHDYIARTQHDL--SVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACS
         ++ GRWIH YI +    +  + SL  SL DMYAKCG+I+ A ++FNS+  + L SWN++I G A+HG    +   F +MR   ++PDDIT +G+L+ACS
Subjt:  DLETGRWIHDYIARTQHDL--SVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACS

Query:  HAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNI
        H+G++  G+  F  M   Y + PKLEHYGCM+DLL  +GL  EA E I  M +EP+G IW S+L AC+++ N+ELGE  A  L+++EP N G Y+LLSNI
Subjt:  HAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNI

Query:  YARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCY
        YA    WNEV K R L+N++G++K PGCSSI ID+V H F+ GD  HP   EI+ ML ++   L+ AG+V D SEVLQ + ++ KE ++  HSEKLA+ +
Subjt:  YARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCY

Query:  GLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW
        GL+ +K G ++ I+KNLRVC +CH A KL+SKIY+R+I  RDR RFHHF+DG CSC +YW
Subjt:  GLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW

Q9SN39 Pentatricopeptide repeat-containing protein DOT4, chloroplastic

6.1e-149

40.54

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Query:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL
        A  +F    E ++++WN+++ G+V + +  + L  +++ML+    + D  T  S+  GCA      +G+ +H   VK     +     TLL+MY+ CGDL
Subjt:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL

Query:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE
        +SA+ +F +M  R+ V +TSMI+GY R     EA+ L+E+MEE+G SPD  T+  +++ CA  R L  G ++H  I+E  +     + +AL+DMYAKCG 
Subjt:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE

Query:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC
        ++ A  VF  +  +D+ +W+ +I GY KN  + EAL LF  +       P+E T+  V+ ACA L   + GR IH YI R  +     ++NSL DMYAKC
Subjt:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC

Query:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC
        G + +A  +F+ ++ +DL+SW  +I G  +HG G+EA+A F QMR   ++ D+I+ + +L ACSH+GLV EG + F+ M+    I P +EHY C+VD+L 
Subjt:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC

Query:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV
        R G L +A  FI  MP+ P+  IWG++L  CR++++++L E+ A  + ELEP N G Y+L++NIYA  + W +VK++R+ + +RG++K PGCS I I   
Subjt:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV

Query:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR
         + F+AGD S+PET  I   L +VR ++   GY       L +  + +KEE++  HSEKLA+  G++ S  G  I + KNLRVC DCH   K +SK+ RR
Subjt:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR

Query:  QITVRDRNRFHHFKDGSCSCRNYW
        +I +RD NRFH FKDG CSCR +W
Subjt:  QITVRDRNRFHHFKDGSCSCRNYW

Arabidopsis top hits

e value

%identity

Alignment

AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein

9.3e-169

45.3

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        L YA S+F   QE N+L WNTM RG   S  P  AL+ Y+ M+     +P+ +TFP +LK CA    FK G+ +HG V+K   D DLYV T+L++MY   
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHR-------------------------------NKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDL
        G L  A  +F+K  HR                               + V W +MISGY       EAL L++ M +    PDE TM T+VSACA+   +
Subjt:  GDLNSARLLFEKMGHR-------------------------------NKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDL

Query:  GVGMKLHSRIRETGMKICAVLGSALVDMYAKCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG
         +G ++H  I + G      + +AL+D+Y+KCGEL+TA  +F+ L  +DV +W+ LI GY   N   EAL LF+E+  S    PN+VT+L+++ ACA LG
Subjt:  GVGMKLHSRIRETGMKICAVLGSALVDMYAKCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG

Query:  DLETGRWIHDYIARTQHDL--SVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACS
         ++ GRWIH YI +    +  + SL  SL DMYAKCG+I+ A ++FNS+  + L SWN++I G A+HG    +   F +MR   ++PDDIT +G+L+ACS
Subjt:  DLETGRWIHDYIARTQHDL--SVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACS

Query:  HAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNI
        H+G++  G+  F  M   Y + PKLEHYGCM+DLL  +GL  EA E I  M +EP+G IW S+L AC+++ N+ELGE  A  L+++EP N G Y+LLSNI
Subjt:  HAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNI

Query:  YARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCY
        YA    WNEV K R L+N++G++K PGCSSI ID+V H F+ GD  HP   EI+ ML ++   L+ AG+V D SEVLQ + ++ KE ++  HSEKLA+ +
Subjt:  YARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCY

Query:  GLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW
        GL+ +K G ++ I+KNLRVC +CH A KL+SKIY+R+I  RDR RFHHF+DG CSC +YW
Subjt:  GLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW

AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein

6.3e-149

40.87

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Query:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL
        A  +F    E ++++WNT++ G+  + M R AL+  ++ +   +  P   T  S+L   + L    VGK +HG  ++   DS + + T L++MYA CG L
Subjt:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL

Query:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE
         +AR LF+ M  RN V W SMI  Y +N+ P EA+L+++KM ++G  P +V++   + ACA+L DL  G  +H    E G+     + ++L+ MY KC E
Subjt:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE

Query:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC
        + TA  +F  L  R + +W+A+I G+ +N R I+AL  F ++  S  ++P+  T ++V++A A+L      +WIH  + R+  D +V ++ +L DMYAKC
Subjt:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC

Query:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC
        G I +A+ IF+ MS+R + +WN++I+G   HG G+ AL  F +M+   +KP+ +T + V++ACSH+GLV+ G K F+ MK  Y I   ++HYG MVDLL 
Subjt:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC

Query:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV
        RAG L EA +FI  MP++P   ++G+MLGAC+++ N+   E+AA  L EL P + G ++LL+NIY    MW +V ++R  M  +G++KTPGCS + I N 
Subjt:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV

Query:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR
         HSF +G  +HP++ +I+  L ++   +K AGYV D + VL  + +D KE+ +S HSEKLA+ +GLL +  G  I + KNLRVC+DCH A K +S +  R
Subjt:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR

Query:  QITVRDRNRFHHFKDGSCSCRNYW
        +I VRD  RFHHFK+G+CSC +YW
Subjt:  QITVRDRNRFHHFKDGSCSCRNYW

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.3e-166

40.97

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Query:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC
        L YA  +F    + N   WNT++R +     P  ++ ++++M+  S   P+++TFP L+K  A +    +G+ LHG  VK  + SD++V  +L++ Y +C
Subjt:  LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAAC

Query:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK
        GDL+SA  +F  +  ++ V W SMI+G+ +   P++AL L++KME +      VTM  ++SACA++R+L  G ++ S I E  + +   L +A++DMY K
Subjt:  GDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAK

Query:  CGELKTARQVFDHLSE-------------------------------RDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG
        CG ++ A+++FD + E                               +D+ AW+ALI  Y +N +  EAL +F E+    NM+ N++T+++ +SACAQ+G
Subjt:  CGELKTARQVFDHLSE-------------------------------RDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLG

Query:  DLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHA
         LE GRWIH YI +    ++  ++++L  MY+KCG+++ ++++FNS+ KRD+  W+++I GLA+HG G EA+  F +M+  ++KP+ +T   V  ACSH 
Subjt:  DLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHA

Query:  GLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYA
        GLV E +  FH+M++ YGI P+ +HY C+VD+L R+G L +A +FI AMP+ P+ ++WG++LGAC+++ N+ L E A   LLELEP NDG ++LLSNIYA
Subjt:  GLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYA

Query:  RRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDK-KEESVSQHSEKLALCYG
        +   W  V ++R+ M   G++K PGCSSI ID + H FL+GD +HP + +++  L +V EKLK  GY  +IS+VLQ I +++ KE+S++ HSEKLA+CYG
Subjt:  RRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDK-KEESVSQHSEKLALCYG

Query:  LLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW
        L+ ++    I ++KNLRVC DCH+  KL+S++Y R+I VRDR RFHHF++G CSC ++W
Subjt:  LLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW

AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein

4.1e-148

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Query:  LAYAYSIFSH-TQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAA
        L+YA ++FS        + +N  LR    S  PR  +  Y + +       D+F+F  +LK  + +     G  LHG   K     D +VET  ++MYA+
Subjt:  LAYAYSIFSH-TQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAA

Query:  CGDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYA
        CG +N AR +F++M HR+ V W +MI  Y R    +EA  L+E+M++    PDE+ +  +VSAC    ++     ++  + E  +++   L +ALV MYA
Subjt:  CGDLNSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYA

Query:  -------------------------------KCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQL
                                       KCG L  A+ +FD   ++D+  W+ +I  YV+++   EAL++F E+   S ++P+ V++ +V+SACA L
Subjt:  -------------------------------KCGELKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQL

Query:  GDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSH
        G L+  +W+H  I     +  +S++N+L +MYAKCG +D  + +F  M +R+++SW+S+IN L++HG   +AL+ F +M+  +++P+++T +GVL  CSH
Subjt:  GDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSH

Query:  AGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIY
        +GLV+EGKK F  M   Y I PKLEHYGCMVDL  RA LL EA E I +MP+  N  IWGS++ ACR++  +ELG+ AA+ +LELEP +DG  +L+SNIY
Subjt:  AGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIY

Query:  ARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYG
        AR + W +V+ IR +M E+ + K  G S I  +  +H FL GD  H ++ EI+  L +V  KLKLAGYV D   VL ++ +++K++ V  HSEKLALC+G
Subjt:  ARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYG

Query:  LLKSKEG------GRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW
        L+  ++       G I I+KNLRVC DCH   KLVSK+Y R+I VRDR RFH +K+G CSCR+YW
Subjt:  LLKSKEG------GRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW

AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein

4.3e-150

40.54

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Query:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL
        A  +F    E ++++WN+++ G+V + +  + L  +++ML+    + D  T  S+  GCA      +G+ +H   VK     +     TLL+MY+ CGDL
Subjt:  AYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDL

Query:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE
        +SA+ +F +M  R+ V +TSMI+GY R     EA+ L+E+MEE+G SPD  T+  +++ CA  R L  G ++H  I+E  +     + +AL+DMYAKCG 
Subjt:  NSARLLFEKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGE

Query:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC
        ++ A  VF  +  +D+ +W+ +I GY KN  + EAL LF  +       P+E T+  V+ ACA L   + GR IH YI R  +     ++NSL DMYAKC
Subjt:  LKTARQVFDHLSERDVYAWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKC

Query:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC
        G + +A  +F+ ++ +DL+SW  +I G  +HG G+EA+A F QMR   ++ D+I+ + +L ACSH+GLV EG + F+ M+    I P +EHY C+VD+L 
Subjt:  GEIDVAKKIFNSMSKRDLISWNSLINGLALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLC

Query:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV
        R G L +A  FI  MP+ P+  IWG++L  CR++++++L E+ A  + ELEP N G Y+L++NIYA  + W +VK++R+ + +RG++K PGCS I I   
Subjt:  RAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNIELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNV

Query:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR
         + F+AGD S+PET  I   L +VR ++   GY       L +  + +KEE++  HSEKLA+  G++ S  G  I + KNLRVC DCH   K +SK+ RR
Subjt:  THSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDDKKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRR

Query:  QITVRDRNRFHHFKDGSCSCRNYW
        +I +RD NRFH FKDG CSCR +W
Subjt:  QITVRDRNRFHHFKDGSCSCRNYW

Sequences

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CDS sequence

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CTTGCCTATGCTTATTCAATCTTCTCTCACACTCAAGAAGCAAATATACTTACTTGGAACACCATGTTGAGAGGCTTCGTCGACTCCGACATGCCGAGAAGGGCACTCCA
GAGCTACATTGAGATGCTTCTATGGTCTAGCAATGTTCCTGATAGATTCACGTTTCCTTCTCTGCTGAAGGGTTGCGCCCATTTATTGGATTTCAAAGTTGGGAAGATTT
TGCATGGCCAAGTTGTCAAGTATATGCTTGATTCTGACCTGTACGTAGAAACCACATTGTTAAATATGTATGCTGCCTGTGGGGATTTAAACTCAGCGAGGCTGCTGTTT
GAGAAAATGGGTCACAGAAACAAAGTGGTTTGGACTTCTATGATCAGTGGTTATACCAGAAACCAATGTCCAAATGAGGCCTTGCTTTTGTATGAGAAAATGGAGGAAGA
TGGGTTTAGCCCTGATGAAGTTACCATGGCCACGCTTGTATCAGCTTGTGCTGAATTGAGAGATTTGGGTGTTGGAATGAAGCTGCATTCTCGAATTCGGGAGACGGGTA
TGAAGATTTGTGCTGTTTTAGGAAGTGCTTTGGTTGATATGTATGCTAAATGTGGGGAGCTCAAAACTGCAAGGCAAGTGTTTGATCATTTGTCAGAGAGAGATGTATAT
GCTTGGTCGGCTTTGATTTTTGGTTATGTCAAGAACAACAGAAGCATAGAGGCATTGCAATTATTCAGGGAAGTGGCTGGCAGTTCGAACATGCGTCCGAATGAAGTCAC
AATTCTAGCTGTGGTTTCGGCTTGTGCTCAATTGGGTGACTTGGAAACAGGAAGATGGATTCATGACTACATTGCGAGGACTCAACACGATCTGTCTGTTAGTTTGAGTA
ACTCATTGACCGACATGTACGCAAAGTGTGGAGAAATAGATGTTGCCAAAAAAATCTTCAATAGCATGTCGAAAAGAGATTTGATCTCTTGGAATTCCCTCATTAATGGT
CTTGCTCTGCATGGCCTCGGCAGGGAGGCTCTCGCACGGTTCCGTCAAATGCGAACGACAGACTTGAAGCCAGATGATATAACTTTAATTGGGGTACTGACTGCCTGCAG
CCACGCAGGGTTAGTTCAAGAGGGCAAGAAGCATTTCCATGAAATGAAAGCTTTATATGGAATCAGACCTAAGTTGGAGCATTATGGGTGCATGGTAGATCTTTTATGCA
GAGCGGGACTTCTGGCAGAAGCTCGGGAATTTATCCGAGCAATGCCTTTAGAACCAAATGGTGCAATATGGGGCTCTATGCTTGGCGCTTGCAGAGTTTATAACAATATT
GAACTCGGGGAGGAAGCTGCGAGATGCCTGCTAGAACTTGAACCAACAAATGATGGAGTTTACATTTTGCTCTCAAACATTTATGCAAGAAGGAAAATGTGGAATGAAGT
GAAAAAGATTAGAGAATTGATGAATGAAAGAGGAATTCAGAAAACACCTGGTTGCAGTTCGATTGTCATCGATAACGTCACCCATTCGTTTCTGGCTGGAGATTGTTCTC
ACCCAGAAACAACTGAAATATTTATGATGCTTACACAAGTTAGAGAGAAGCTGAAGCTGGCAGGCTATGTTGCAGATATCTCAGAAGTATTACAAAACATTAATGATGAT
AAGAAGGAAGAATCAGTTTCTCAACATAGTGAAAAACTAGCTTTATGTTATGGCTTATTGAAATCCAAGGAAGGGGGAAGAATAGTTATCCTGAAGAACCTTAGGGTCTG
CTCAGACTGTCATACTGCAATAAAACTAGTCTCAAAAATCTACCGGAGGCAGATAACGGTCAGAGATCGAAACCGTTTCCACCACTTCAAAGACGGTTCCTGTTCCTGCA
GAAATTATTGG

mRNA sequence

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Protein sequence

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LAYAYSIFSHTQEANILTWNTMLRGFVDSDMPRRALQSYIEMLLWSSNVPDRFTFPSLLKGCAHLLDFKVGKILHGQVVKYMLDSDLYVETTLLNMYAACGDLNSARLLF
EKMGHRNKVVWTSMISGYTRNQCPNEALLLYEKMEEDGFSPDEVTMATLVSACAELRDLGVGMKLHSRIRETGMKICAVLGSALVDMYAKCGELKTARQVFDHLSERDVY
AWSALIFGYVKNNRSIEALQLFREVAGSSNMRPNEVTILAVVSACAQLGDLETGRWIHDYIARTQHDLSVSLSNSLTDMYAKCGEIDVAKKIFNSMSKRDLISWNSLING
LALHGLGREALARFRQMRTTDLKPDDITLIGVLTACSHAGLVQEGKKHFHEMKALYGIRPKLEHYGCMVDLLCRAGLLAEAREFIRAMPLEPNGAIWGSMLGACRVYNNI
ELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKIRELMNERGIQKTPGCSSIVIDNVTHSFLAGDCSHPETTEIFMMLTQVREKLKLAGYVADISEVLQNINDD
KKEESVSQHSEKLALCYGLLKSKEGGRIVILKNLRVCSDCHTAIKLVSKIYRRQITVRDRNRFHHFKDGSCSCRNYW

MS005696 (gene) of Bitter gourd (TR) v1 genome