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MS005734 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005734
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEndoglucanase
Genome locationscaffold254:1203845..1203982
RNA-Seq ExpressionMS005734
SyntenyMS005734
Gene Ontology termsGO:0000272 - polysaccharide catabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605570.1 Endoglucanase 6, partial [Cucurbita argyrosperma subsp. sororia]5.0e-0557.14Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QT+  TYNN PL+G+L  FH  + GYNQL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
KAG7035484.1 Endoglucanase 6 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-0557.14Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QT+  TYNN PL+G+L  FH  + GYNQL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
XP_004143869.1 endoglucanase 6 [Cucumis sativus]3.8e-0554.35Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
        Y+NF +Q+DNY+QT+  TYNN PL+G+L  FH  + GYNQL+ ++L
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
XP_023534509.1 endoglucanase 6-like [Cucurbita pepo subsp. pepo]5.0e-0557.14Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QT+  TYNN PL+G+L  FH  + GYNQL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
XP_028069788.1 endoglucanase 6-like [Camellia sinensis]3.8e-0559.52Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QTK  TYNN PL+GIL   H+ + GYNQL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
TrEMBL top hitse value%identityAlignment
A0A0A0KNR9 Endoglucanase1.8e-0554.35Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
        Y+NF +Q+DNY+QT+  TYNN PL+G+L  FH  + GYNQL+ ++L
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
A0A4S4DYL5 Endoglucanase2.4e-0559.52Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QTK  TYNN PL+GIL   H+ + GYNQL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
A0A6J1ELX4 Endoglucanase4.1e-0554.35Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
        Y+NF +++DNY+QT+  TYNN PL+GIL  FH  + GYNQL+ + L
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
A0A6J1H287 Endoglucanase2.4e-0557.14Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QT+  TYNN PL+G+L  FH  + GYNQL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
A0A6J1HXY6 Endoglucanase3.1e-0554.35Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
        Y+NF +++DNY+QT+  TYNN PL+GIL  FH  + GYNQL+ + L
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL
SwissProt top hitse value%identityAlignment
Q42059 Endoglucanase 68.8e-0545.24Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +++DNY+QT+  TYNN PL+G+L    + + GY+Q +
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
Q8L7I0 Endoglucanase 191.5e-0447.62Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QT+  TYNN PL+G+L    +   G++QL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
Arabidopsis top hitse value%identityAlignment
AT1G64390.1 glycosyl hydrolase 9C26.3e-0645.24Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +++DNY+QT+  TYNN PL+G+L    + + GY+Q +
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
AT4G11050.1 glycosyl hydrolase 9C31.1e-0547.62Show/hide
Query:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI
        Y+NF +Q+DNY+QT+  TYNN PL+G+L    +   G++QL+
Subjt:  YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACAACAACTTCCTCAACCAACAAGACAACTACGATCAAACAAAGCTTGTCACCTACAACAACGTCCCTCTTGTTGGCATTCTCACTTGCTTCCACAATGTCTATTGTGG
CTACAATCAGCTCATCAATTTACTTTTA
mRNA sequenceShow/hide mRNA sequence
TACAACAACTTCCTCAACCAACAAGACAACTACGATCAAACAAAGCTTGTCACCTACAACAACGTCCCTCTTGTTGGCATTCTCACTTGCTTCCACAATGTCTATTGTGG
CTACAATCAGCTCATCAATTTACTTTTA
Protein sequenceShow/hide protein sequence
YNNFLNQQDNYDQTKLVTYNNVPLVGILTCFHNVYCGYNQLINLLL