; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005744 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005744
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein LITTLE ZIPPER 2-like
Genome locationscaffold254:1269445..1269816
RNA-Seq ExpressionMS005744
SyntenyMS005744
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146904.1 protein LITTLE ZIPPER 2-like [Momordica charantia]3.1e-4498Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRLLFV STRSSLGCRHRHRRHPLRVHRLIRRMRLVKEE EDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

XP_022924351.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]1.3e-2674Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRL     TRS L    RHRR P+RV+RL+RRMR  KEE    GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS QKP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

XP_022980450.1 protein LITTLE ZIPPER 1-like [Cucurbita maxima]1.3e-2674Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRL     TRS L    RHRR P+RV+RL+RRMR  KEE    GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS QKP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

XP_023527865.1 protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]1.3e-2674Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRL     TRS L    RHRR P+RV+RL+RRMR  KEE    GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS QKP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

XP_038901104.1 protein LITTLE ZIPPER 1-like [Benincasa hispida]4.2e-2571Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRL+  P   S L C  RHRR P+RV+RL+RRM+  KEE     VE EMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLS++Q+FSN KP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

TrEMBL top hitse value%identityAlignment
A0A0A0L3S0 Uncharacterized protein3.5e-2569Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MC SS  +  P   S L CR R RR P+RV+ L+RRMR  KEE    GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS+ KP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

A0A6J1CZF0 protein LITTLE ZIPPER 2-like1.5e-4498Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRLLFV STRSSLGCRHRHRRHPLRVHRLIRRMRLVKEE EDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

A0A6J1E9A8 protein LITTLE ZIPPER 1-like6.4e-2774Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRL     TRS L    RHRR P+RV+RL+RRMR  KEE    GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS QKP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

A0A6J1IF90 protein LITTLE ZIPPER 3-like2.7e-2568.69Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQK
        MCDSSR + +  TRSSL C  RHRR P+R++RL RRM+  K+ T   GV+ EMEI+NLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q FS +K
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQK

A0A6J1IWC5 protein LITTLE ZIPPER 1-like6.4e-2774Show/hide
Query:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP
        MCDSSRL     TRS L    RHRR P+RV+RL+RRMR  KEE    GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS QKP
Subjt:  MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 14.9e-0849.25Show/hide
Query:  LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQS
        +R+ RL RR R+ +EE        +ME+ NLKL++ENQ+II ENE+L+K+A LLH+EN+ L S +Q+
Subjt:  LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQS

Q9LXI8 Protein LITTLE ZIPPER 37.3e-0460.98Show/hide
Query:  MEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQ
        ME  N KLF+EN  I++ENERLRK+A LL++ENQ LL Q++
Subjt:  MEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQ

Q9LZX5 Protein LITTLE ZIPPER 21.7e-0848.78Show/hide
Query:  PSTRS-SLGCRHRHRRHP-LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLS
        P+ RS S   +H+ +    LR+  L RR RL+KE+        EME++NLKLF+ENQSII ENE L+K+A LLH EN  L +
Subjt:  PSTRS-SLGCRHRHRRHP-LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLS

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding3.5e-0949.25Show/hide
Query:  LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQS
        +R+ RL RR R+ +EE        +ME+ NLKL++ENQ+II ENE+L+K+A LLH+EN+ L S +Q+
Subjt:  LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQS

AT3G52770.1 protein binding5.2e-0560.98Show/hide
Query:  MEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQ
        ME  N KLF+EN  I++ENERLRK+A LL++ENQ LL Q++
Subjt:  MEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQ

AT3G60890.1 protein binding1.2e-0948.78Show/hide
Query:  PSTRS-SLGCRHRHRRHP-LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLS
        P+ RS S   +H+ +    LR+  L RR RL+KE+        EME++NLKLF+ENQSII ENE L+K+A LLH EN  L +
Subjt:  PSTRS-SLGCRHRHRRHP-LRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLS

AT3G60890.2 protein binding2.9e-0848.19Show/hide
Query:  PSTRS-SLGCRHRHRRHP-LRVHRLI-RRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLS
        P+ RS S   +H+ +    LR+  L  RR RL+KE+        EME++NLKLF+ENQSII ENE L+K+A LLH EN  L +
Subjt:  PSTRS-SLGCRHRHRRHP-LRVHRLI-RRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGATTCCTCTCGATTGCTGTTCGTTCCGTCCACTCGTTCGTCTCTAGGTTGCCGACATCGTCACCGGCGGCATCCGCTTCGAGTTCACAGGCTTATTAGGAGGAT
GAGATTGGTGAAGGAAGAGACGGAGGACGACGGCGTCGAGGTGGAGATGGAGATCAAGAATTTGAAACTGTTCATGGAGAATCAGAGCATTATCGAGGAGAACGAGCGGC
TGAGAAAGAGAGCTTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAAATCCAGAGTTTCTCCAATCAAAAACCG
mRNA sequenceShow/hide mRNA sequence
ATGTGCGATTCCTCTCGATTGCTGTTCGTTCCGTCCACTCGTTCGTCTCTAGGTTGCCGACATCGTCACCGGCGGCATCCGCTTCGAGTTCACAGGCTTATTAGGAGGAT
GAGATTGGTGAAGGAAGAGACGGAGGACGACGGCGTCGAGGTGGAGATGGAGATCAAGAATTTGAAACTGTTCATGGAGAATCAGAGCATTATCGAGGAGAACGAGCGGC
TGAGAAAGAGAGCTTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAAATCCAGAGTTTCTCCAATCAAAAACCG
Protein sequenceShow/hide protein sequence
MCDSSRLLFVPSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEETEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKP