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MS005779 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005779
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBnaC06g07050D protein
Genome locationscaffold254:1538132..1538260
RNA-Seq ExpressionMS005779
SyntenyMS005779
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7013179.1 unnamed protein product [Microthlaspi erraticum]3.9e-1290.7Show/hide
Query:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
        L+RLPVISRRKVRMTSSHHAPYALGDT ATM G KGRDPARVS
Subjt:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
KAF3623672.1 hypothetical protein FXO38_30632 [Capsicum annuum]1.1e-0987.5Show/hide
Query:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARV
        RL VISRRKVRMTSSHHAPY LGDT ATM G KGRDPARV
Subjt:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARV
PHT34165.1 hypothetical protein CQW23_25965 [Capsicum baccatum]3.3e-1190.24Show/hide
Query:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPAR
        L+RLPVISRRKVRMTSSHHAPYALGDT ATM G KGRDPAR
Subjt:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPAR
QHO12182.1 uncharacterized protein DS421_15g504680 [Arachis hypogaea]9.7e-1190.24Show/hide
Query:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
        RLPVISRRKVRMTSSHHAPYALGDT ATM G K RDPARVS
Subjt:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
VFQ70667.1 unnamed protein product [Cuscuta campestris]2.5e-1188.37Show/hide
Query:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
        L+RLPVISRRKVRMTSSHHAPYALGDT ATM G KGRDPAR S
Subjt:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
TrEMBL top hitse value%identityAlignment
A0A2G2UXE5 Uncharacterized protein6.8e-1087.18Show/hide
Query:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPAR
        RLPVISRRKVRMTSSHHAPYALG+T ATM G KGRDP R
Subjt:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPAR
A0A2G2VMF2 Uncharacterized protein1.6e-1190.24Show/hide
Query:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPAR
        L+RLPVISRRKVRMTSSHHAPYALGDT ATM G KGRDPAR
Subjt:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPAR
A0A2G2W5E7 Uncharacterized protein3.4e-0985Show/hide
Query:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARV
        RL +I RRKVRMTSSHHAPYALGDT ATM G KGRDPARV
Subjt:  RLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARV
A0A484L2W9 Uncharacterized protein1.2e-1188.37Show/hide
Query:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
        L+RLPVISRRKVRMTSSHHAPYALGDT ATM G KGRDPAR S
Subjt:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
A0A6D2HBK0 Uncharacterized protein1.9e-1290.7Show/hide
Query:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
        L+RLPVISRRKVRMTSSHHAPYALGDT ATM G KGRDPARVS
Subjt:  LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGAGCAGATTGCCGGTGATAAGTCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACAAGTGCTACAATGGTCGGGATAAAGGGTCG
TGATCCCGCGAGGGTGAGC
mRNA sequenceShow/hide mRNA sequence
CTGAGCAGATTGCCGGTGATAAGTCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACAAGTGCTACAATGGTCGGGATAAAGGGTCG
TGATCCCGCGAGGGTGAGC
Protein sequenceShow/hide protein sequence
LSRLPVISRRKVRMTSSHHAPYALGDTSATMVGIKGRDPARVS