; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005790 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005790
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger, LIM-type
Genome locationscaffold254:1596178..1597738
RNA-Seq ExpressionMS005790
SyntenyMS005790
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR001781 - Zinc finger, LIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582598.1 LIM domain-containing protein PLIM2c, partial [Cucurbita argyrosperma subsp. sororia]1.6e-9582.86Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNF   K     S     + +RAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAEP
        SSMFSGTQDKCS CSKTVYPLEKVTLEGECYHK CFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA+TPPPE A +DEA+ 
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAEP

Query:  QAQSEDHDVE
         A++E+  VE
Subjt:  QAQSEDHDVE

XP_022147448.1 LIM domain-containing protein PLIM2c-like [Momordica charantia]2.4e-10286.73Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNF   K     +  S     RAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
        SSMF GTQDKC+VC+KTVYPLEKVTLEGE YHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPAD+EAEP+
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ

Query:  AQSEDHDVEQS
         ++ED+DVE+S
Subjt:  AQSEDHDVEQS

XP_022147508.1 LIM domain-containing protein PLIM2c-like [Momordica charantia]4.0e-11093.36Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHA K     +       TRAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
        SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ

Query:  AQSEDHDVEQS
        AQSEDHDVEQS
Subjt:  AQSEDHDVEQS

XP_022980412.1 LIM domain-containing protein PLIM2c-like [Cucurbita maxima]1.3e-9583.49Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNF   K     S     + +RAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAE-
        SSMFSGTQDKCS CSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA+TPPPE A +DEA+ 
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAE-

Query:  -PQAQSEDHDVE
          +AQSE+  VE
Subjt:  -PQAQSEDHDVE

XP_038891725.1 LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]5.7e-9681.52Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CK HFEQLFKESGNFSKNF + K     S       TR PSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
        SSMFSGTQDKC+VC+KTVYPLEKVTLEGECYHK CFRCAHGGC+LTH + AALDGVLYCKHHFAQLFMVKGNYNHVL+AAANKK +TPP E  +++A+PQ
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ

Query:  AQSEDHDVEQS
         QSE+H VEQS
Subjt:  AQSEDHDVEQS

TrEMBL top hitse value%identityAlignment
A0A5D3D2N0 LIM domain-containing protein PLIM2b-like8.8e-9580.57Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCK HFEQLFKESGNFSKNF +     +I P S   F   PSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
        SSMF GTQDKCSVC+KTVYPLEKVTLEGECYHK CFRCAHGGC+LTH + AALDGVLYCKHHFAQLFMVKGNYNHVL+AAANKK +TPP E  D++AEP 
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ

Query:  AQSEDHDVEQS
         +S +  VEQS
Subjt:  AQSEDHDVEQS

A0A6J1D1C3 LIM domain-containing protein PLIM2c-like1.1e-10286.73Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNF   K     +  S     RAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
        SSMF GTQDKC+VC+KTVYPLEKVTLEGE YHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPAD+EAEP+
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ

Query:  AQSEDHDVEQS
         ++ED+DVE+S
Subjt:  AQSEDHDVEQS

A0A6J1D1H7 LIM domain-containing protein PLIM2c-like2.0e-11093.36Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHA K     +       TRAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
        SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQ

Query:  AQSEDHDVEQS
        AQSEDHDVEQS
Subjt:  AQSEDHDVEQS

A0A6J1E9B9 LIM domain-containing protein PLIM2c-like5.2e-9582.21Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNF   K     S     + +RAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAEP
        SSMFSGTQDKCS CSKTVYPLEKVTLEGECYHK CFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA+TPPPE A +DEA+ 
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAEP

Query:  QAQSEDHD
         A+++  +
Subjt:  QAQSEDHD

A0A6J1IRA7 LIM domain-containing protein PLIM2c-like6.1e-9683.49Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNF   K     S     + +RAPSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAE-
        SSMFSGTQDKCS CSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA+TPPPE A +DEA+ 
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPA-DDEAE-

Query:  -PQAQSEDHDVE
          +AQSE+  VE
Subjt:  -PQAQSEDHDVE

SwissProt top hitse value%identityAlignment
O04193 LIM domain-containing protein WLIM2a3.8e-7162.9Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGT  KC+AC+KTVY V+LLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+PHFEQLFKESG+FSKNF +   PL+  P       R PS+L
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS
        + MFSGTQDKC+ C+KTVYP+EKVT+E +CYHK+CF+C+HGGC ++ SN AAL+G+LYCKHHFAQLF  KG+YNH++++A+ K+A+
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS

O80839 LIM domain-containing protein PLIM2a3.2e-7865.47Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYV+DLL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKPHFEQLFKESGN+SKNF A K             TR PSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS------TPP-----
        SS FSGTQDKC+ C KTVYPLEKVT+EGE YHKTCFRC H GC LTHS+ A+L+GVLYCK HF QLF+ KG+YNHV QAAAN + S      +PP     
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS------TPP-----

Query:  -------PEPADDEAEPQAQSED
               PE  +D+A P+A  E+
Subjt:  -------PEPADDEAEPQAQSED

Q1ECF5 LIM domain-containing protein PLIM2b7.7e-8069.5Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKC  CDKTVYVVD+LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK HFEQLFKESGNFSKNF   K             TR PSK+
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK---ASTPPPEPADDEA
        SS+F GTQDKC+ C KTVYPLEK+ +EGEC+HKTCFRCAHGGC LTHS+ A+LD VLYC+HHF QLFM KGNY HVLQAA +++    +T PPEP +D A
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK---ASTPPPEPADDEA

Q500W4 LIM domain-containing protein PLIM2c4.2e-7866.98Show/hide
Query:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKLS
        AFTGT DKCKACDKTVYV+DL++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK HFEQLFKESGNFSKNF         +       T+AP++LS
Subjt:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKLS

Query:  SMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAST---PPPEPADDEAE
        S FSGTQDKC+ C KTVYPLEK+T+EGE YHKTCFRCAH GC LTHS+ AALDGVLYCK HF+QLF+ KGNYNHVLQAAAN + ST      EP +DEA 
Subjt:  SMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAST---PPPEPADDEAE

Query:  P------QAQSEDHD
        P       A +E+H+
Subjt:  P------QAQSEDHD

Q9M047 LIM domain-containing protein WLIM2b3.6e-6962.37Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGT  KCKAC+KTVY V+LLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKPHFEQLFKESG+F+KNF +   P   +  S    TR PS++
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS
        +  FSGTQ+KC+ CSKTVYP+EKVT+E + YHK+CF+C+HGGC ++ SN AAL+G+LYCKHHFAQLF  KG+YNH++++A+ K+++
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS

Arabidopsis top hitse value%identityAlignment
AT1G01780.1 GATA type zinc finger transcription factor family protein5.5e-8169.5Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKC  CDKTVYVVD+LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK HFEQLFKESGNFSKNF   K             TR PSK+
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK---ASTPPPEPADDEA
        SS+F GTQDKC+ C KTVYPLEK+ +EGEC+HKTCFRCAHGGC LTHS+ A+LD VLYC+HHF QLFM KGNY HVLQAA +++    +T PPEP +D A
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK---ASTPPPEPADDEA

AT2G39900.1 GATA type zinc finger transcription factor family protein2.7e-7262.9Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGT  KC+AC+KTVY V+LLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+PHFEQLFKESG+FSKNF +   PL+  P       R PS+L
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS
        + MFSGTQDKC+ C+KTVYP+EKVT+E +CYHK+CF+C+HGGC ++ SN AAL+G+LYCKHHFAQLF  KG+YNH++++A+ K+A+
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS

AT2G45800.1 GATA type zinc finger transcription factor family protein2.3e-7965.47Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGTLDKCKACDKTVYV+DLL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKPHFEQLFKESGN+SKNF A K             TR PSKL
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS------TPP-----
        SS FSGTQDKC+ C KTVYPLEKVT+EGE YHKTCFRC H GC LTHS+ A+L+GVLYCK HF QLF+ KG+YNHV QAAAN + S      +PP     
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS------TPP-----

Query:  -------PEPADDEAEPQAQSED
               PE  +D+A P+A  E+
Subjt:  -------PEPADDEAEPQAQSED

AT3G55770.1 GATA type zinc finger transcription factor family protein2.6e-7062.37Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL
        M+FTGT  KCKAC+KTVY V+LLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKPHFEQLFKESG+F+KNF +   P   +  S    TR PS++
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKL

Query:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS
        +  FSGTQ+KC+ CSKTVYP+EKVT+E + YHK+CF+C+HGGC ++ SN AAL+G+LYCKHHFAQLF  KG+YNH++++A+ K+++
Subjt:  SSMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS

AT3G61230.1 GATA type zinc finger transcription factor family protein3.0e-7966.98Show/hide
Query:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKLS
        AFTGT DKCKACDKTVYV+DL++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK HFEQLFKESGNFSKNF         +       T+AP++LS
Subjt:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKLS

Query:  SMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAST---PPPEPADDEAE
        S FSGTQDKC+ C KTVYPLEK+T+EGE YHKTCFRCAH GC LTHS+ AALDGVLYCK HF+QLF+ KGNYNHVLQAAAN + ST      EP +DEA 
Subjt:  SMFSGTQDKCSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAST---PPPEPADDEAE

Query:  P------QAQSEDHD
        P       A +E+H+
Subjt:  P------QAQSEDHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCACAGGAACGCTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGATTTGCTCTCTCTTGAAGGGAATCCTTACCATAAGTCTTGCTTCAAATG
CAGCCACTGCAAGGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTATTGCAAGCCTCATTTCGAGCAACTCTTCAAGGAATCTGGAAACTTCAGCA
AGAATTTTCATGCTTGTAAAATGCCTCTTTCCATCTCTCCTTATTCTCTCTTTTTGTTCACAAGGGCTCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGACAAA
TGTTCTGTCTGCTCGAAAACGGTTTATCCATTGGAGAAGGTGACTCTGGAGGGGGAATGCTACCATAAGACATGCTTTAGATGTGCTCATGGTGGCTGCAATTTGACTCA
CTCTAATGCTGCTGCTCTTGATGGAGTGTTGTACTGTAAGCACCATTTTGCTCAGCTCTTCATGGTGAAAGGAAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGA
AAGCCTCCACACCACCTCCTGAACCAGCGGATGATGAAGCCGAGCCTCAGGCACAGTCCGAGGACCATGACGTAGAGCAGTCT
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCACAGGAACGCTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGATTTGCTCTCTCTTGAAGGGAATCCTTACCATAAGTCTTGCTTCAAATG
CAGCCACTGCAAGGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTCCTGTATTGCAAGCCTCATTTCGAGCAACTCTTCAAGGAATCTGGAAACTTCAGCA
AGAATTTTCATGCTTGTAAAATGCCTCTTTCCATCTCTCCTTATTCTCTCTTTTTGTTCACAAGGGCTCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGACAAA
TGTTCTGTCTGCTCGAAAACGGTTTATCCATTGGAGAAGGTGACTCTGGAGGGGGAATGCTACCATAAGACATGCTTTAGATGTGCTCATGGTGGCTGCAATTTGACTCA
CTCTAATGCTGCTGCTCTTGATGGAGTGTTGTACTGTAAGCACCATTTTGCTCAGCTCTTCATGGTGAAAGGAAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGA
AAGCCTCCACACCACCTCCTGAACCAGCGGATGATGAAGCCGAGCCTCAGGCACAGTCCGAGGACCATGACGTAGAGCAGTCT
Protein sequenceShow/hide protein sequence
MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFHACKMPLSISPYSLFLFTRAPSKLSSMFSGTQDK
CSVCSKTVYPLEKVTLEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADDEAEPQAQSEDHDVEQS