CuGenDBv2

Gene ID	MS005808
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein PAIR1 isoform X1
Genome location	scaffold254:1722917..1727601
RNA-Seq Expression	MS005808
Synteny	MS005808
Gene Ontology terms	GO:0009553 - embryo sac development (biological process) GO:0009555 - pollen development (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0051026 - chiasma assembly (biological process)
InterPro domains	IPR034546 - Protein PAIR1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147452.1 protein PAIR1 isoform X1 [Momordica charantia]

1.3e-187

99.71

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQASLLKLKDDVVSTFTQEMKAM CALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

XP_022147454.1 protein PAIR1 isoform X2 [Momordica charantia]

1.3e-185

99.42

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQASLLKLKDDVVSTFTQEMKAM CALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        KEDAKKAIPFSE QCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

XP_023526419.1 protein PAIR1-like isoform X1 [Cucurbita pepo subsp. pepo]

2.6e-151

82.03

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFS GLSS+HGMYSQLSQNSFDEVVTN+QRFSSQDRENSIKKNSFFPP S+ REDCQL LS+SSTSL Q+WKSTPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRR+G IENSL+KFG ILDSLHSD+LQLNKG+KQ+SLDVEGIWQKM + SS LQS+NKE DD++ATLDGGFK+ISDQLK DAYQE++HEISDVLSAL 
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQAS LKLK+D +STFTQEM AM C LK P +KFPP+S  +PES+ CL  PQ+KR RCKIQ ASPNVCIRA AVQ+EEVG WKSVKV KAFCT+SVV+
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        KED KK IPFSEQQCLVL  EYRVIVDSDEEI RSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

XP_038882627.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida]

3.6e-156

83.19

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTN+QRFSSQDRENSIKKNSFFPPLSYSREDCQL LS+SSTSL Q+WK TPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRR+G IENSL+KFG ILDSLHSD+LQLNKG+KQ+SLDVEGIWQKM V+SSSLQS+NK+ DD++ATLDGGFK+IS+QLKKDAYQE+L+EIS+VLS+L 
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQAS LKLK+D +STFTQE+KAM C LKNP QKFPP+SI+SPES+ CL VPQ+KR RCKIQSASPNVCIRA  VQ EEVG WKSVKV K FCT SV +
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        K+D KK IPFSEQQ LVL  EYRVIVDSDEEI RSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

XP_038882642.1 putative recombination initiation defects 3 isoform X2 [Benincasa hispida]

1.1e-154

82.9

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTN+QRFSSQDRENSIKKNSFFPPLSYSREDCQL LS+SSTSL Q+WK TPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRR+G IENSL+KFG ILDSLHSD+LQLNKG+KQ+SLDVEGIWQKM V+SSSLQS+NK+ DD++ATLDGGFK+IS+QLKKDAYQE+L+EIS+VLS+L 
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQAS LKLK+D +STFTQE+KAM C LKNP QKFPP+SI+SPES+ CL VPQ+KR RCKIQSASPNVCIRA  VQ EEVG WKSVKV K FCT SV +
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        K+D KK IPFSEQ+ LVL  EYRVIVDSDEEI RSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L487 Uncharacterized protein

4.1e-150

79.42

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTN+QRFSSQDRENSIKKNSFFPP+SYS+ED QL +S+SSTSL QKW+ +PLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRR+G IENS++KFG ILDSL SD+LQLNKG+KQVSLDVE IWQKM ++SSSLQS+NK+ DD++A +DGGFK+ISDQLKKDAYQE+LHEISD LS+L 
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQAS LKLK+D +STFT+EMKAM C LKNP QKFPP+SI+SPES+ CL VP++K++RCKIQSA+PNVC +A  VQ EEVG WKSVKV KAFCT+SVV+
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        ++D  K IPFSEQQCLVL  EYRVIVDSDEEI RSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

A0A1S3AV35 protein PAIR1 isoform X2

5.4e-150

80.58

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTN+QRFSSQDRENSIKKNSFFPPLSYS+EDCQL LS+SSTSL QKW+ +PL DSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRR+G IENSL+KFG ILDSL SD+LQLNKG+KQVSLDVE IWQKM V+SS LQS+NK+ DD++A +DGGFK+ISDQLKKDAYQE+LHEISD LS+L 
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQAS LKLK+D +STFT+EMKAM   LK P QKFPP+SI+SPE + CL VP++KR RCKIQSASPNVC +A AVQ EEVG WKSVKV KAFCT+SVV 
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        ++D  K IPFSEQQCLVL  EYRVIVDSDEEI RSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

A0A6J1D122 protein PAIR1 isoform X2

6.1e-186

99.42

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQASLLKLKDDVVSTFTQEMKAM CALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        KEDAKKAIPFSE QCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

A0A6J1D1C7 protein PAIR1 isoform X1

6.5e-188

99.71

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQASLLKLKDDVVSTFTQEMKAM CALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

A0A6J1FTV4 protein PAIR1 isoform X2

7.0e-150

80.87

Show/hide

Query:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE
        TGQQAPQLRSQPSQQSFSQGLSS HG  SQ SQNSFDEVVTN+QRFSSQDRENSIKKNSFFPPLSYSRE+CQLPLS+SSTSL Q+WKSTPLPDSKCQVGE
Subjt:  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGE

Query:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG
        ELDRR+G IENSL+KFG ILDSLH D+L LN+G+KQ+SLDVEGIWQK+ V+SS LQS+NKE DD+++TLDGGFK+ISDQLKKDAYQE+LHEISDVLSAL 
Subjt:  ELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALG

Query:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR
        KQVQAS LKL++D +STFTQEMKAM C LK P QKFP   I SPES+  L VPQ+KR+RCKIQSASP+VCIRA AVQ EEVG WKSVKV K FCT++V +
Subjt:  KQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVR

Query:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT
        KEDAKKAIPFSEQ+ LV+  EYRVIVDSDEEI RSFSCLIEEKKT
Subjt:  KEDAKKAIPFSEQQCLVLGTEYRVIVDSDEEIGRSFSCLIEEKKT

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

6.3e-55

36.62

Show/hide

Query:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNDQRFSSQDRENSIKK-NSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQV
        Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ NDQRFSSQ+R+ S+KK +S  PP+++ RED QL  SRSS+ L ++W S  + +SK Q+
Subjt:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNDQRFSSQDRENSIKK-NSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQV

Query:  GEELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSA
         EEL++R G +E SLS+FGM+LDS+ SD++Q N+G K+V L+ E I QK+T+  +SLQ + KEQ D +A+LDGG K I ++  KD  QEKL +I  +L+ 
Subjt:  GEELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSA

Query:  LGKQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSA----SPNVCI-------------RAPAVQNE--
        + +QV+ +L K++ ++  TFT+E++ +  +L+ P  +    +  +P+      +P+++ Q  K+ ++     P V +             R P  ++   
Subjt:  LGKQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSA----SPNVCI-------------RAPAVQNE--

Query:  --------------------------------EVGGWKSVKVSKAFCTNSVVRKEDAKKAIPFSEQQCLVLGTEYRVIVDSDEE-IGRSFSCLIEE
                                        +VG WK+VK  K+       RK    ++     +QC        V++DSDEE I   FSCLI E
Subjt:  --------------------------------EVGGWKSVKVSKAFCTNSVVRKEDAKKAIPFSEQQCLVLGTEYRVIVDSDEE-IGRSFSCLIEE

Q75RY2 Protein PAIR1

4.1e-22

39.82

Show/hide

Query:  APQLRSQP---SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNDQRFSSQDRENSIKKNSFFPPLSYS--REDCQLPLSRSSTSLVQKWKSTP
        A Q RSQP   SQQSFSQG S+   H   SQ SQ S D+ +       T DQRF   D  +S K+ S  P  S S  RE+ QL L++  ++ V +W  + 
Subjt:  APQLRSQP---SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNDQRFSSQDRENSIKKNSFFPPLSYS--REDCQLPLSRSSTSLVQKWKSTP

Query:  LPDSKCQV-GEELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLK-KDAYQEK
              QV  E+++R+  ++ +S+ K GM++DS+ SDV+QLN+ +K+ SLD   I QK+ V  SSLQ + K QDD++A      K   DQ    ++   K
Subjt:  LPDSKCQV-GEELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLK-KDAYQEK

Query:  LHEISDVLSALGKQVQASLLK
        L+EIS  L+ L  Q+QA  L+
Subjt:  LHEISDVLSALGKQVQASLLK

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

4.5e-56

36.62

Show/hide

Query:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNDQRFSSQDRENSIKK-NSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQV
        Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ NDQRFSSQ+R+ S+KK +S  PP+++ RED QL  SRSS+ L ++W S  + +SK Q+
Subjt:  QQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNDQRFSSQDRENSIKK-NSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQV

Query:  GEELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSA
         EEL++R G +E SLS+FGM+LDS+ SD++Q N+G K+V L+ E I QK+T+  +SLQ + KEQ D +A+LDGG K I ++  KD  QEKL +I  +L+ 
Subjt:  GEELDRRIGNIENSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSA

Query:  LGKQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSA----SPNVCI-------------RAPAVQNE--
        + +QV+ +L K++ ++  TFT+E++ +  +L+ P  +    +  +P+      +P+++ Q  K+ ++     P V +             R P  ++   
Subjt:  LGKQVQASLLKLKDDVVSTFTQEMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSA----SPNVCI-------------RAPAVQNE--

Query:  --------------------------------EVGGWKSVKVSKAFCTNSVVRKEDAKKAIPFSEQQCLVLGTEYRVIVDSDEE-IGRSFSCLIEE
                                        +VG WK+VK  K+       RK    ++     +QC        V++DSDEE I   FSCLI E
Subjt:  --------------------------------EVGGWKSVKVSKAFCTNSVVRKEDAKKAIPFSEQQCLVLGTEYRVIVDSDEE-IGRSFSCLIEE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCACAGGGACTGTCATCTCAGCACGGCATGTATTCTCAGCTCTCGCAGAACTCTTTTGA
CGAAGTCGTGACAAATGATCAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCATTTTTTCCTCCTCTAAGTTATTCCAGAGAAGATTGCCAATTGC
CACTCTCTAGATCTTCTACCAGTCTAGTACAAAAATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCATTGGAAACATAGAA
AACTCATTAAGCAAGTTTGGAATGATCTTGGATTCTCTTCACAGTGATGTCCTGCAACTAAACAAAGGAGTGAAGCAAGTTTCTCTGGATGTGGAGGGCATATGGCAAAA
GATGACTGTTCACAGTAGCTCACTGCAGTCCGTGAACAAAGAGCAAGATGACATTAGAGCTACCCTTGATGGAGGCTTCAAAGTGATATCTGATCAACTAAAGAAGGATG
CATACCAAGAAAAGCTACATGAGATTTCCGATGTTCTTTCTGCGTTGGGAAAGCAAGTACAAGCATCTCTACTGAAATTAAAAGATGACGTCGTCAGCACATTCACACAA
GAAATGAAGGCAATGACTTGTGCCTTGAAGAACCCATCACAGAAATTTCCACCAAACTCTATTCGATCACCTGAGAGTAGCGGTTGTTTGGTTGTTCCACAGAAAAAGCG
GCAGCGATGTAAAATCCAATCTGCGTCTCCAAATGTTTGCATTCGAGCACCTGCAGTACAAAACGAGGAAGTGGGAGGTTGGAAATCAGTAAAAGTTTCAAAGGCTTTCT
GCACTAATAGTGTGGTGAGAAAGGAAGATGCAAAGAAAGCAATTCCATTTTCTGAACAGCAGTGCCTGGTGCTGGGAACAGAATATAGAGTTATTGTTGATTCCGATGAG
GAGATCGGAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNDQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSRSSTSLVQKWKSTPLPDSKCQVGEELDRRIGNIE
NSLSKFGMILDSLHSDVLQLNKGVKQVSLDVEGIWQKMTVHSSSLQSVNKEQDDIRATLDGGFKVISDQLKKDAYQEKLHEISDVLSALGKQVQASLLKLKDDVVSTFTQ
EMKAMTCALKNPSQKFPPNSIRSPESSGCLVVPQKKRQRCKIQSASPNVCIRAPAVQNEEVGGWKSVKVSKAFCTNSVVRKEDAKKAIPFSEQQCLVLGTEYRVIVDSDE
EIGRSFSCLIEEKKT

MS005808 (gene) of Bitter gourd (TR) v1 genome