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MS005843 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005843
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNB-ARC domain-containing protein
Genome locationscaffold254:1967181..1967759
RNA-Seq ExpressionMS005843
SyntenyMS005843
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048937.1 hypothetical protein E6C27_scaffold171G001570 [Cucumis melo var. makuwa]1.6e-4965.45Show/hide
Query:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL
        +N+S PSPIRHVLRE +NLL+RS +R RE RIP NRT  IKLQPSID TE++ +STLRHHPQHLR+LI+TE D AD I  ++H  + GE EFRV +++ L
Subjt:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL

Query:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG
        V+  +  VIVAIW  GGVVL +ENDLGENDAG GAG     A  E AG G A ADVE EE+GGEEDEEGE YG+GVAEADPGEG+ G RGG
Subjt:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG

KAG2380275.1 uncharacterized protein HKW66_Vig0170540 [Vigna angularis]1.3e-2247.59Show/hide
Query:  VLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEADDAAVIVA
        VLRERH+LL+R G+RR    +PA+  GA++L+P ++  EVK +STL HH QHLR+L++ E DGA  +  A  R    EG+  VG+   L EA D+ V+  
Subjt:  VLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEADDAAVIVA

Query:  IWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGG-RG----GGH
              VVLG+E++  E+DA  G G     A V  A A GAAA+V  E+EGG+E+E+ EG GDGVAEA+ GE   GG RG    GGH
Subjt:  IWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGG-RG----GGH

QCE02652.1 hypothetical protein DEO72_LG8g667 [Vigna unguiculata]1.3e-2247.69Show/hide
Query:  PPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEAD
        PP  I  VLRERH+LLQ  G+RR    +PA+  GA++L+P ++  EVK +STL HH QHLR+L++ E DGA  +  A    V  EGE  VG+   L EA 
Subjt:  PPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEAD

Query:  DAAVIVAIWAGGGVVLGNENDLGENDAGIGAG-GSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGG-RG----GGH
        D  V+        VVLG+EN+  E+DA  G G  +   A V  A A GAAA+V  E+EGG+E+E+ EG GDGVA+A+ GE   GG RG    GGH
Subjt:  DAAVIVAIWAGGGVVLGNENDLGENDAGIGAG-GSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGG-RG----GGH

RDX75027.1 hypothetical protein CR513_45146, partial [Mucuna pruriens]5.6e-2651.08Show/hide
Query:  PSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEADD
        P PI  VLRERH+LLQR GERRRERR+ AN  GA++ +P I+  EV+ MSTL HHP+HLR+L++ +  GA  + P    + L  G   VG+   LVE   
Subjt:  PSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEADD

Query:  AAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG
         A +     G  VVL +E+D G++DA  G GG G G G  AAGA GAAA      EGGEE+EE EGYG+GVA+A+ GE  V  RGG
Subjt:  AAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG

TYK17631.1 hypothetical protein E5676_scaffold434G005020 [Cucumis melo var. makuwa]7.3e-5065.45Show/hide
Query:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL
        +N+S PSPIRHVLRE +NLL+RS +R RE RIP NRT  IKLQPSID TE++ +STLRHHPQHLR+LI+TE DGAD I  ++H  + GE EFRV +++ L
Subjt:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL

Query:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG
        V+  +  VIVAIW  GGVVL +ENDLGENDAG GAG     A  E AG G A A+VE EE+GGEEDEEGE YG+GVAEADPGEG+ G RGG
Subjt:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG

TrEMBL top hitse value%identityAlignment
A0A0A0L8R4 Uncharacterized protein6.1e-5065.45Show/hide
Query:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL
        +N+S PSPIRHVLRE +NLL+RS +R  E RIP NRT  IKLQPSID TE++ +STLRHHPQHLR+LI+TE D AD I  ++H  + GE EFRV +++ L
Subjt:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL

Query:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG
        V+  +  VIVAIW+  GVVL NENDLGENDAG+GAG   G A  E AG G A ADVE EE+GGEEDEEGE YG+GVAEADPGEG+ G RGG
Subjt:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG

A0A371F9R6 Uncharacterized protein (Fragment)2.7e-2651.08Show/hide
Query:  PSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEADD
        P PI  VLRERH+LLQR GERRRERR+ AN  GA++ +P I+  EV+ MSTL HHP+HLR+L++ +  GA  + P    + L  G   VG+   LVE   
Subjt:  PSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEADD

Query:  AAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG
         A +     G  VVL +E+D G++DA  G GG G G G  AAGA GAAA      EGGEE+EE EGYG+GVA+A+ GE  V  RGG
Subjt:  AAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG

A0A4D6MPX0 Uncharacterized protein6.3e-2347.69Show/hide
Query:  PPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEAD
        PP  I  VLRERH+LLQ  G+RR    +PA+  GA++L+P ++  EVK +STL HH QHLR+L++ E DGA  +  A    V  EGE  VG+   L EA 
Subjt:  PPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEAD

Query:  DAAVIVAIWAGGGVVLGNENDLGENDAGIGAG-GSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGG-RG----GGH
        D  V+        VVLG+EN+  E+DA  G G  +   A V  A A GAAA+V  E+EGG+E+E+ EG GDGVA+A+ GE   GG RG    GGH
Subjt:  DAAVIVAIWAGGGVVLGNENDLGENDAGIGAG-GSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGG-RG----GGH

A0A5A7U3Q9 Uncharacterized protein7.9e-5065.45Show/hide
Query:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL
        +N+S PSPIRHVLRE +NLL+RS +R RE RIP NRT  IKLQPSID TE++ +STLRHHPQHLR+LI+TE D AD I  ++H  + GE EFRV +++ L
Subjt:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL

Query:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG
        V+  +  VIVAIW  GGVVL +ENDLGENDAG GAG     A  E AG G A ADVE EE+GGEEDEEGE YG+GVAEADPGEG+ G RGG
Subjt:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG

A0A5D3D078 Uncharacterized protein3.5e-5065.45Show/hide
Query:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL
        +N+S PSPIRHVLRE +NLL+RS +R RE RIP NRT  IKLQPSID TE++ +STLRHHPQHLR+LI+TE DGAD I  ++H  + GE EFRV +++ L
Subjt:  INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSL

Query:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG
        V+  +  VIVAIW  GGVVL +ENDLGENDAG GAG     A  E AG G A A+VE EE+GGEEDEEGE YG+GVAEADPGEG+ G RGG
Subjt:  VEADDAAVIVAIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCAATCAGTCACCTCCTTCTCCGATCCGCCATGTACTGCGAGAGCGGCACAACCTCCTGCAGAGGAGTGGAGAGCGGCGTCGGGAGCGGCGAATTCCGGCAAACAGGAC
AGGAGCCATTAAGCTTCAACCAAGCATCGATGCAACAGAGGTGAAAGAAATGTCTACACTCAGGCATCATCCTCAGCATCTCCGCCTCCTTATAATCACAGAGGCAGATG
GAGCAGACGCAATTGGTCCCGCCGCCCATCGTCTTGTCCTTGGAGAAGGGGAATTTAGGGTAGGAATTGATCACAGCCTGGTCGAGGCCGACGACGCCGCTGTCATCGTC
GCGATCTGGGCCGGCGGCGGCGTCGTCCTCGGCAACGAAAATGATCTGGGGGAGAATGATGCCGGCATCGGAGCGGGAGGGAGCGGCGGAGGGGCGGGAGTGGAGGCGGC
GGGAGCGGGAGGCGCGGCAGCAGACGTAGAATGCGAGGAGGAGGGCGGAGAGGAGGACGAGGAAGGCGAGGGCTATGGCGATGGCGTAGCCGAGGCCGATCCTGGAGAGG
GAGTAGTTGGAGGAAGAGGGGGAGGACAT
mRNA sequenceShow/hide mRNA sequence
ATCAATCAGTCACCTCCTTCTCCGATCCGCCATGTACTGCGAGAGCGGCACAACCTCCTGCAGAGGAGTGGAGAGCGGCGTCGGGAGCGGCGAATTCCGGCAAACAGGAC
AGGAGCCATTAAGCTTCAACCAAGCATCGATGCAACAGAGGTGAAAGAAATGTCTACACTCAGGCATCATCCTCAGCATCTCCGCCTCCTTATAATCACAGAGGCAGATG
GAGCAGACGCAATTGGTCCCGCCGCCCATCGTCTTGTCCTTGGAGAAGGGGAATTTAGGGTAGGAATTGATCACAGCCTGGTCGAGGCCGACGACGCCGCTGTCATCGTC
GCGATCTGGGCCGGCGGCGGCGTCGTCCTCGGCAACGAAAATGATCTGGGGGAGAATGATGCCGGCATCGGAGCGGGAGGGAGCGGCGGAGGGGCGGGAGTGGAGGCGGC
GGGAGCGGGAGGCGCGGCAGCAGACGTAGAATGCGAGGAGGAGGGCGGAGAGGAGGACGAGGAAGGCGAGGGCTATGGCGATGGCGTAGCCGAGGCCGATCCTGGAGAGG
GAGTAGTTGGAGGAAGAGGGGGAGGACAT
Protein sequenceShow/hide protein sequence
INQSPPSPIRHVLRERHNLLQRSGERRRERRIPANRTGAIKLQPSIDATEVKEMSTLRHHPQHLRLLIITEADGADAIGPAAHRLVLGEGEFRVGIDHSLVEADDAAVIV
AIWAGGGVVLGNENDLGENDAGIGAGGSGGGAGVEAAGAGGAAADVECEEEGGEEDEEGEGYGDGVAEADPGEGVVGGRGGGH