; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005846 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005846
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionU11/U12 small nuclear ribonucleoprotein 59 kDa protein
Genome locationscaffold254:1977770..1980923
RNA-Seq ExpressionMS005846
SyntenyMS005846
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR031974 - Programmed cell death protein 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582639.1 Protein ABIL1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-18084.6Show/hide
Query:  MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES
        MN VPHQFAAQPP F MPPP    SC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQES
Subjt:  MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES

Query:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE
        RSVE   ALM++LR QLHPFR+  DESS       AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADEWRAREIAKDIAKRKVEKMKE
Subjt:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE

Query:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN
        IAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYNPES+DP+
Subjt:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN

Query:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI
        S  ER EERNDQR  S DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEI
Subjt:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI

Query:  WAAYLVRPK
        WAAYLVRPK
Subjt:  WAAYLVRPK

KAG7019034.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Cucurbita argyrosperma subsp. argyrosperma]3.2e-18084.35Show/hide
Query:  MNSVPHQFAAQPPWFSMPPPS----CASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES
        MN VPHQFAAQPP F MPPP+    C+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQES
Subjt:  MNSVPHQFAAQPPWFSMPPPS----CASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES

Query:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE
        RSVE   ALM++LR QLHPFR+  DESS       AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADEWRAREIAKDIAKRKVEKMKE
Subjt:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE

Query:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN
        IAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYNPES+DP+
Subjt:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN

Query:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI
        S  ER EERNDQR  S DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEI
Subjt:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI

Query:  WAAYLVRPK
        WAAYLVRPK
Subjt:  WAAYLVRPK

XP_022147279.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia]4.5e-21999.75Show/hide
Query:  MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVV
        MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVV
Subjt:  MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVV

Query:  ALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAK
        ALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAK
Subjt:  ALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAK

Query:  EEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE
        EEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE
Subjt:  EEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE

Query:  ERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVR
        ERNDQRT SADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVR
Subjt:  ERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVR

Query:  PK
        PK
Subjt:  PK

XP_022924846.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita moschata]1.4e-18084.84Show/hide
Query:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES
        MN VPHQFAAQPP F MP    PPSC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQES
Subjt:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES

Query:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE
        RSVE   ALM++LR QLHPFR+  DESS       AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADEWRAREIAKDIAKRKVEKMKE
Subjt:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE

Query:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN
        IAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYN ES+DP+
Subjt:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN

Query:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI
        S  ER EERNDQRT S DDKVSNIST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEI
Subjt:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI

Query:  WAAYLVRPK
        WAAYLVRPK
Subjt:  WAAYLVRPK

XP_038877454.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida]7.1e-18083.41Show/hide
Query:  MNSVPHQFAAQPPWFSMPPP-----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQE
        MN VPHQFA QPPWF +PPP     SC+SFW+NLNVRDRLRDLQ+TLDLAKSMQKELEMLMI K+G SSEQSA ++PN S   EFS+YL+DRRIN ELQE
Subjt:  MNSVPHQFAAQPPWFSMPPP-----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQE

Query:  SRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMK
        SRSVE   ALM++LRAQLHPF +  DESS     + AV+LS KLLKAKRNK WRK+KRKRIAESLAKER SFD VD+EAD+WRAREIAKDIAKRKVEKMK
Subjt:  SRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMK

Query:  EIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDP
        EIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYNPES+DP
Subjt:  EIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDP

Query:  NSNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADE
         S     EERNDQRT SADDK+SN STDKEPGKQFGE QG GR+YDYA NLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADE
Subjt:  NSNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADE

Query:  IWAAYLVRPK
        IWAAYLVRPK
Subjt:  IWAAYLVRPK

TrEMBL top hitse value%identityAlignment
A0A6J1CZQ3 U11/U12 small nuclear ribonucleoprotein 59 kDa protein2.2e-21999.75Show/hide
Query:  MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVV
        MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVV
Subjt:  MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVV

Query:  ALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAK
        ALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAK
Subjt:  ALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAK

Query:  EEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE
        EEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE
Subjt:  EEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE

Query:  ERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVR
        ERNDQRT SADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVR
Subjt:  ERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVR

Query:  PK
        PK
Subjt:  PK

A0A6J1EAC6 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X11.4e-17883.57Show/hide
Query:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSM-----QKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINL
        MN VPHQFAAQPP F MP    PPSC+SFW+NLNVRDRLRDLQ++LDLAKS+     QKELEML I K+GKSSEQSA ++P DS   EFS+YLED+RI+L
Subjt:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSM-----QKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINL

Query:  ELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKV
        ELQESRSVE   ALM++LR QLHPFR+  DESS       AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADEWRAREIAKDIAKRKV
Subjt:  ELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKV

Query:  EKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPE
        EKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYN E
Subjt:  EKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPE

Query:  SKDPNSNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPP
        S+DP+S  ER EERNDQRT S DDKVSNIST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPP
Subjt:  SKDPNSNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPP

Query:  PADEIWAAYLVRPK
        PADEIWAAYLVRPK
Subjt:  PADEIWAAYLVRPK

A0A6J1EAK8 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X26.9e-18184.84Show/hide
Query:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES
        MN VPHQFAAQPP F MP    PPSC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQES
Subjt:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES

Query:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE
        RSVE   ALM++LR QLHPFR+  DESS       AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADEWRAREIAKDIAKRKVEKMKE
Subjt:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE

Query:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN
        IAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYN ES+DP+
Subjt:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN

Query:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI
        S  ER EERNDQRT S DDKVSNIST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEI
Subjt:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI

Query:  WAAYLVRPK
        WAAYLVRPK
Subjt:  WAAYLVRPK

A0A6J1IWF2 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X24.9e-17984.11Show/hide
Query:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES
        MN VPHQFAAQPP F MP    PPSC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML I K+ KSSEQSA ++P DS   EFS+YLED+RI+LELQES
Subjt:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQES

Query:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE
        RSVE   ALM++LR QLHPFR+  DESS       AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADEWRAREIAKDIAKRKVEKMKE
Subjt:  RSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKE

Query:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN
        IAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTI SYNPES+DP+
Subjt:  IARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN

Query:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI
        S  ER EERNDQ T S DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEI
Subjt:  SNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEI

Query:  WAAYLVRPK
        WAAYLVRPK
Subjt:  WAAYLVRPK

A0A6J1IZE8 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X11.0e-17682.85Show/hide
Query:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSM-----QKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINL
        MN VPHQFAAQPP F MP    PPSC+SFW+NLNVRDRLRDLQ++LDLAKS+     QKELEML I K+ KSSEQSA ++P DS   EFS+YLED+RI+L
Subjt:  MNSVPHQFAAQPPWFSMP----PPSCASFWNNLNVRDRLRDLQETLDLAKSM-----QKELEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINL

Query:  ELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKV
        ELQESRSVE   ALM++LR QLHPFR+  DESS       AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADEWRAREIAKDIAKRKV
Subjt:  ELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKV

Query:  EKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPE
        EKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTI SYNPE
Subjt:  EKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPE

Query:  SKDPNSNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPP
        S+DP+S  ER EERNDQ T S DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPP
Subjt:  SKDPNSNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPP

Query:  PADEIWAAYLVRPK
        PADEIWAAYLVRPK
Subjt:  PADEIWAAYLVRPK

SwissProt top hitse value%identityAlignment
Q8VYD3 U11/U12 small nuclear ribonucleoprotein 59 kDa protein1.8e-10155.27Show/hide
Query:  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHP
        P     PP C  FWN  N+ D+L+ LQ+TL+LAKSM+KELE L + KD K S ++AV    DS   EYLE R+++L  QE  SV+A  +LM  LRAQL P
Subjt:  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHP

Query:  FRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELEL
        FR V DE+SPW+EK+AAVRL+ K+ K+ RNKLW+KRKR+  AE  AKE   F+  DREADEWR +E+AKD+A RKV++MK I ++KAK E+KR++ ELEL
Subjt:  FRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELEL

Query:  ALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTVSA
        ALIVE++QELRS+RI+KLKKQGHFLPEEDDKF E VRAAVE+EE QA +  +T+     IA+ E +  T    + N   KD N+NA   E     RT+ A
Subjt:  ALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTVSA

Query:  DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLV
         D                   GC    D  +NLP+E YHYYYGSN DMG LIE+RR WDAY+  GGSRIPGHWVQP PPA+EIWA+ LV
Subjt:  DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLV

Arabidopsis top hitse value%identityAlignment
AT2G46200.1 unknown protein1.3e-10255.27Show/hide
Query:  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHP
        P     PP C  FWN  N+ D+L+ LQ+TL+LAKSM+KELE L + KD K S ++AV    DS   EYLE R+++L  QE  SV+A  +LM  LRAQL P
Subjt:  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHP

Query:  FRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELEL
        FR V DE+SPW+EK+AAVRL+ K+ K+ RNKLW+KRKR+  AE  AKE   F+  DREADEWR +E+AKD+A RKV++MK I ++KAK E+KR++ ELEL
Subjt:  FRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELEL

Query:  ALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTVSA
        ALIVE++QELRS+RI+KLKKQGHFLPEEDDKF E VRAAVE+EE QA +  +T+     IA+ E +  T    + N   KD N+NA   E     RT+ A
Subjt:  ALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTVSA

Query:  DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLV
         D                   GC    D  +NLP+E YHYYYGSN DMG LIE+RR WDAY+  GGSRIPGHWVQP PPA+EIWA+ LV
Subjt:  DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLV

AT2G46200.2 unknown protein1.3e-10255.27Show/hide
Query:  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHP
        P     PP C  FWN  N+ D+L+ LQ+TL+LAKSM+KELE L + KD K S ++AV    DS   EYLE R+++L  QE  SV+A  +LM  LRAQL P
Subjt:  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHP

Query:  FRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELEL
        FR V DE+SPW+EK+AAVRL+ K+ K+ RNKLW+KRKR+  AE  AKE   F+  DREADEWR +E+AKD+A RKV++MK I ++KAK E+KR++ ELEL
Subjt:  FRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELEL

Query:  ALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTVSA
        ALIVE++QELRS+RI+KLKKQGHFLPEEDDKF E VRAAVE+EE QA +  +T+     IA+ E +  T    + N   KD N+NA   E     RT+ A
Subjt:  ALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTVSA

Query:  DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLV
         D                   GC    D  +NLP+E YHYYYGSN DMG LIE+RR WDAY+  GGSRIPGHWVQP PPA+EIWA+ LV
Subjt:  DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCTCGATGCCGCCGCCGTCTTGTGCATCTTTCTGGAATAACCTCAACGTGCGTGATCGTCTAAGGGA
TTTGCAAGAAACGCTGGATCTCGCGAAGTCGATGCAGAAAGAACTTGAGATGTTGATGATATTTAAAGATGGCAAATCGTCCGAGCAGAGTGCGGTTAGTGTGCCTAACG
ACAGTGAGTTTTCTGAGTACTTGGAAGATAGAAGGATTAATTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGTGGTTGCTTTGATGAGAAAGTTGAGAGCTCAGCTT
CATCCATTTAGGATGGTCTATGACGAATCGAGTCCATGGCAAGAAAAAAACGCTGCAGTTAGGTTATCTACTAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAA
GAGGAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGTGGAAGTTTTGACCTAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTG
CAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAGTTAAAGCAAAAGAGGAGAAGAAGAGGATAGATTCTGAGCTTGAACTAGCACTAATAGTGGAAAAGTTGCAA
GAACTTCGCTCTATCAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTGGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACG
TCAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAGGGATGCCATTGCAACTGCAGAAGTGTCTAGGAAGACCATTCCAAGTTATAATCCTGAATCAAAAGATCCAAATA
GTAATGCAGAAAGGCTCGAAGAAAGAAATGATCAAAGAACTGTAAGTGCAGATGATAAGGTCTCTAACATCAGCACTGATAAGGAACCTGGGAAACAGTTTGGAGAAGGA
CAAGGTTGTGGAAGAGTGTATGATTATGCGGCCAATTTACCAATGGAATTCTATCATTATTATTATGGAAGTAACACTGATATGGGGACATTAATTGAGGTTAGAAGATC
GTGGGATGCATACATAAGACCTGGAGGAAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCTGATGAAATATGGGCAGCATATTTGGTGCGACCAAAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCTCGATGCCGCCGCCGTCTTGTGCATCTTTCTGGAATAACCTCAACGTGCGTGATCGTCTAAGGGA
TTTGCAAGAAACGCTGGATCTCGCGAAGTCGATGCAGAAAGAACTTGAGATGTTGATGATATTTAAAGATGGCAAATCGTCCGAGCAGAGTGCGGTTAGTGTGCCTAACG
ACAGTGAGTTTTCTGAGTACTTGGAAGATAGAAGGATTAATTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGTGGTTGCTTTGATGAGAAAGTTGAGAGCTCAGCTT
CATCCATTTAGGATGGTCTATGACGAATCGAGTCCATGGCAAGAAAAAAACGCTGCAGTTAGGTTATCTACTAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAA
GAGGAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGTGGAAGTTTTGACCTAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTG
CAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAGTTAAAGCAAAAGAGGAGAAGAAGAGGATAGATTCTGAGCTTGAACTAGCACTAATAGTGGAAAAGTTGCAA
GAACTTCGCTCTATCAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTGGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACG
TCAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAGGGATGCCATTGCAACTGCAGAAGTGTCTAGGAAGACCATTCCAAGTTATAATCCTGAATCAAAAGATCCAAATA
GTAATGCAGAAAGGCTCGAAGAAAGAAATGATCAAAGAACTGTAAGTGCAGATGATAAGGTCTCTAACATCAGCACTGATAAGGAACCTGGGAAACAGTTTGGAGAAGGA
CAAGGTTGTGGAAGAGTGTATGATTATGCGGCCAATTTACCAATGGAATTCTATCATTATTATTATGGAAGTAACACTGATATGGGGACATTAATTGAGGTTAGAAGATC
GTGGGATGCATACATAAGACCTGGAGGAAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCTGATGAAATATGGGCAGCATATTTGGTGCGACCAAAA
Protein sequenceShow/hide protein sequence
MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQL
HPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQ
ELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLEERNDQRTVSADDKVSNISTDKEPGKQFGEG
QGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK