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MS005869 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005869
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold254:2109402..2109743
RNA-Seq ExpressionMS005869
SyntenyMS005869
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597110.1 hypothetical protein SDJN03_10290, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2057.14Show/hide
Query:  MVGGATGNGADTKEEQEWRE---------AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNGEL-RMKELETSKVCNTARSSVKKKDVIEA
        M+     N +D KEEQE R+          G G      S+SSFLPE+NL+FVLLSL+   S EDSNG+ GEL + KE+E     N ARSSVKKKDVIEA
Subjt:  MVGGATGNGADTKEEQEWRE---------AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNGEL-RMKELETSKVCNTARSSVKKKDVIEA

Query:  KPEGRRIPQRFHTTIKDHR
        KPE RR+ QRFHTTIKDHR
Subjt:  KPEGRRIPQRFHTTIKDHR

KAG7028573.1 hypothetical protein SDJN02_09754, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1958.04Show/hide
Query:  NGADTKEEQEWRE---------AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNGEL-RMKELETSKVCNTARSSVKKKDVIEAKPEGRRI
        N +D KEEQE R+          G G      S+SSFLPE+NL+FVLLSL+   S E+SNG+ GEL + KE+E     N ARSSVKKKDVIEAKPE  R+
Subjt:  NGADTKEEQEWRE---------AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNGEL-RMKELETSKVCNTARSSVKKKDVIEAKPEGRRI

Query:  PQRFHTTIKDHR
         QRFHTTIKDHR
Subjt:  PQRFHTTIKDHR

KGN56466.1 hypothetical protein Csa_011060 [Cucumis sativus]6.1e-2057.94Show/hide
Query:  GNGADTKEEQEWRE--AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNG-ELRMKELETSKVCNTARSSVKKKDVIEAKPEGRR-IPQRFH
        GN  D K++QE RE    G D  +  S+SSFLP+LNLLFV LSL+  N++EDSN  NG  ++MKE+E S   N A+SS++KKDVIEA+ E RR +PQR H
Subjt:  GNGADTKEEQEWRE--AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNG-ELRMKELETSKVCNTARSSVKKKDVIEAKPEGRR-IPQRFH

Query:  TTIKDHR
        TTIKDHR
Subjt:  TTIKDHR

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q3 Uncharacterized protein3.0e-2057.94Show/hide
Query:  GNGADTKEEQEWRE--AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNG-ELRMKELETSKVCNTARSSVKKKDVIEAKPEGRR-IPQRFH
        GN  D K++QE RE    G D  +  S+SSFLP+LNLLFV LSL+  N++EDSN  NG  ++MKE+E S   N A+SS++KKDVIEA+ E RR +PQR H
Subjt:  GNGADTKEEQEWRE--AGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNG-ELRMKELETSKVCNTARSSVKKKDVIEAKPEGRR-IPQRFH

Query:  TTIKDHR
        TTIKDHR
Subjt:  TTIKDHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAGGAGCGACAGGAAATGGAGCAGACACTAAAGAAGAACAAGAATGGAGAGAAGCTGGAGGAGGAGACAGTCAAGACCCAGTATCGAATTCGTCATTTCTACC
GGAATTGAATCTTCTATTTGTGCTTTTATCATTGGTTCCTTCCAATTCGGATGAAGATTCAAACGGTGACAATGGTGAGTTGAGAATGAAAGAGCTTGAAACTAGTAAAG
TTTGTAATACTGCACGATCGAGCGTAAAAAAGAAAGACGTAATTGAAGCGAAGCCTGAAGGTCGACGAATACCTCAAAGGTTTCATACAACAATAAAAGATCACAGGTTC
TTCCTCTTTTTA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAGGAGCGACAGGAAATGGAGCAGACACTAAAGAAGAACAAGAATGGAGAGAAGCTGGAGGAGGAGACAGTCAAGACCCAGTATCGAATTCGTCATTTCTACC
GGAATTGAATCTTCTATTTGTGCTTTTATCATTGGTTCCTTCCAATTCGGATGAAGATTCAAACGGTGACAATGGTGAGTTGAGAATGAAAGAGCTTGAAACTAGTAAAG
TTTGTAATACTGCACGATCGAGCGTAAAAAAGAAAGACGTAATTGAAGCGAAGCCTGAAGGTCGACGAATACCTCAAAGGTTTCATACAACAATAAAAGATCACAGGTTC
TTCCTCTTTTTA
Protein sequenceShow/hide protein sequence
MVGGATGNGADTKEEQEWREAGGGDSQDPVSNSSFLPELNLLFVLLSLVPSNSDEDSNGDNGELRMKELETSKVCNTARSSVKKKDVIEAKPEGRRIPQRFHTTIKDHRF
FLFL