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MS005886 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005886
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold254:2233511..2233687
RNA-Seq ExpressionMS005886
SyntenyMS005886
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK28781.1 unknown, partial [Arabidopsis thaliana]1.9e-0961.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        SI S WKQC HSG H TVSL  YS + MGQ     P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL

NP_001118383.1 hypothetical protein AT2G25409 [Arabidopsis thaliana]1.9e-0961.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        SI S WKQC HSG H TVSL  YS + MGQ     P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL

VDC63188.1 unnamed protein product, partial [Brassica rapa]1.4e-0756.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        S+ S WKQC HSG H TVSL  YS + M       P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL

XP_010473787.1 PREDICTED: uncharacterized protein LOC104753196, partial [Camelina sativa]1.4e-0756.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        SI S WKQC HSG H T+SL  YS + M       P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL

XP_023873260.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.2 [Quercus suber]7.1e-0456.82Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGPGSRRLSPR
        S+ S WKQC H GM   V+L RY  +H+GQV+ LG G  RLSPR
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGPGSRRLSPR

TrEMBL top hitse value%identityAlignment
A0A3P5YTF3 Uncharacterized protein (Fragment)6.7e-0856.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        S+ S WKQC HSG H TVSL  YS + M       P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL

A0MFS4 Uncharacterized protein (Fragment)9.3e-1061.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        SI S WKQC HSG H TVSL  YS + MGQ     P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL

Q1G355 Uncharacterized protein9.3e-1061.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        SI S WKQC HSG H TVSL  YS + MGQ     P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25409.1 unknown protein1.8e-1361.67Show/hide
Query:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL
        SI S WKQC HSG H TVSL  YS + MGQ     P GS  LSP  TF YDS+VDSSRP+
Subjt:  SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGP-GSRRLSPRITFSYDSMVDSSRPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAATACAATCGACATGGAAGCAATGTTTGCACTCAGGAATGCATCGAACTGTGTCTTTGGATAGGTACTCTCCGAGGCATATGGGACAGGTGATGCCATTGGGGCCAGG
CAGCCGCCGGCTTTCTCCAAGGATTACCTTTTCATATGATTCAATGGTGGATTCGTCCAGACCACTC
mRNA sequenceShow/hide mRNA sequence
TCAATACAATCGACATGGAAGCAATGTTTGCACTCAGGAATGCATCGAACTGTGTCTTTGGATAGGTACTCTCCGAGGCATATGGGACAGGTGATGCCATTGGGGCCAGG
CAGCCGCCGGCTTTCTCCAAGGATTACCTTTTCATATGATTCAATGGTGGATTCGTCCAGACCACTC
Protein sequenceShow/hide protein sequence
SIQSTWKQCLHSGMHRTVSLDRYSPRHMGQVMPLGPGSRRLSPRITFSYDSMVDSSRPL