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MS005903 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005903
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionKrueppel-like factor
Genome locationscaffold254:2338002..2338250
RNA-Seq ExpressionMS005903
SyntenyMS005903
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133805.1 uncharacterized protein LOC101207877 [Cucumis sativus]4.9e-3591.46Show/hide
Query:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        G E KDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYGA IAGGIGAGMLVEIWINDK+K
Subjt:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
XP_008437869.1 PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo]4.1e-3489.02Show/hide
Query:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        G E KDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYGA IAGGIGAGMLVE+WINDK+K
Subjt:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
XP_022942020.1 uncharacterized protein LOC111447184 [Cucurbita moschata]3.7e-3589.16Show/hide
Query:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFYGA IAGGIGAGMLVEIWI DKVK
Subjt:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
XP_022975548.1 uncharacterized protein LOC111475080 [Cucurbita maxima]3.2e-3487.95Show/hide
Query:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSL S +AFYGA IAGGIGAGMLVEIWI DKVK
Subjt:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
XP_023522177.1 uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo]7.5e-3690.36Show/hide
Query:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFYGA IAGGIGAGMLVEIWINDKVK
Subjt:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
TrEMBL top hitse value%identityAlignment
A0A0A0L8I7 Uncharacterized protein2.4e-3591.46Show/hide
Query:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        G E KDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYGA IAGGIGAGMLVEIWINDK+K
Subjt:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
A0A1S3AV52 uncharacterized protein LOC1034831722.0e-3489.02Show/hide
Query:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        G E KDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYGA IAGGIGAGMLVE+WINDK+K
Subjt:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
A0A5D3DB39 Uncharacterized protein2.0e-3489.02Show/hide
Query:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        G E KDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYGA IAGGIGAGMLVE+WINDK+K
Subjt:  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
A0A6J1FVE8 uncharacterized protein LOC1114471841.8e-3589.16Show/hide
Query:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFYGA IAGGIGAGMLVEIWI DKVK
Subjt:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
A0A6J1IJJ2 uncharacterized protein LOC1114750801.5e-3487.95Show/hide
Query:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSL S +AFYGA IAGGIGAGMLVEIWI DKVK
Subjt:  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16950.1 unknown protein1.0e-1444.19Show/hide
Query:  EEAKDPFKGVDWKAVGGDMQKDPSSTNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK
        E AKDP+KG +W     +  K P+++ +      +K+ P  +    + YFLPR+  P A+A+YG+FI GGIGAGM++E WIN KVK
Subjt:  EEAKDPFKGVDWKAVGGDMQKDPSSTNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAGAAGCAAAAGACCCTTTCAAGGGAGTTGATTGGAAAGCCGTGGGTGGCGATATGCAAAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAAC
AAAAATCAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCCTCTGCCATTGCATTCTATGGGGCCTTTATTGCAGGTGGAATTGGTGCTGGGATGCTGG
TGGAGATCTGGATAAATGATAAAGTTAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAGAAGCAAAAGACCCTTTCAAGGGAGTTGATTGGAAAGCCGTGGGTGGCGATATGCAAAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAAC
AAAAATCAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCCTCTGCCATTGCATTCTATGGGGCCTTTATTGCAGGTGGAATTGGTGCTGGGATGCTGG
TGGAGATCTGGATAAATGATAAAGTTAAA
Protein sequenceShow/hide protein sequence
MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK