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MS005904 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005904
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondof zinc finger protein 2-like
Genome locationscaffold254:2341837..2342031
RNA-Seq ExpressionMS005904
SyntenyMS005904
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650669.1 dof zinc finger protein 2 [Cucumis sativus]1.2e-2891.43Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP-----SSGSV
        PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP      SGSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP-----SSGSV

XP_016898925.1 PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo]1.6e-2895.38Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKNRKP +GSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

XP_022147439.1 dof zinc finger protein DOF3.7-like isoform X1 [Momordica charantia]1.3e-3098.46Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

XP_022147440.1 dof zinc finger protein DOF3.7-like isoform X2 [Momordica charantia]1.3e-3098.46Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

XP_023527390.1 dof zinc finger protein 2 [Cucurbita pepo subsp. pepo]2.0e-2895.16Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS
        PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP++
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS

TrEMBL top hitse value%identityAlignment
A0A0A0L5U8 Dof-type domain-containing protein5.8e-2991.43Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP-----SSGSV
        PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP      SGSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP-----SSGSV

A0A1S4DT96 dof zinc finger protein DOF3.77.5e-2995.38Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKNRKP +GSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

A0A5A7U0P5 Dof zinc finger protein DOF3.77.5e-2995.38Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCK+CRRYWTEGGSLRNIPVGGGSRKNRKP +GSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

A0A6J1D062 dof zinc finger protein DOF3.7-like isoform X26.2e-3198.46Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

A0A6J1D105 dof zinc finger protein DOF3.7-like isoform X16.2e-3198.46Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

SwissProt top hitse value%identityAlignment
B9F1L8 Dof zinc finger protein 22.0e-2679.69Show/hide
Query:  QEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV
        ++ LNCPRC S+NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRN+PVGGGSRKN++ SS  V
Subjt:  QEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV

Q43385 Dof zinc finger protein DOF3.72.3e-2782.26Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS
        PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++ S+
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS

Q8LAP8 Dof zinc finger protein DOF4.62.6e-2682.26Show/hide
Query:  EQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS
        + +NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVGGGSRKN++  S S
Subjt:  EQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS

Q9M161 Dof zinc finger protein DOF4.15.2e-2788.14Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK
        PQE  NCPRC SSNTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK

Q9ZPY0 Dof zinc finger protein DOF2.52.1e-2884.38Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS
        PQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++ SS S
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS

Arabidopsis top hitse value%identityAlignment
AT2G46590.1 Dof-type zinc finger DNA-binding family protein1.5e-2984.38Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS
        PQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++ SS S
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS

AT2G46590.2 Dof-type zinc finger DNA-binding family protein1.5e-2984.38Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS
        PQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++ SS S
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGS

AT3G61850.1 Dof-type zinc finger DNA-binding family protein1.7e-2882.26Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS
        PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++ S+
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS

AT3G61850.2 Dof-type zinc finger DNA-binding family protein1.7e-2882.26Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS
        PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++ S+
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS

AT3G61850.3 Dof-type zinc finger DNA-binding family protein1.7e-2882.26Show/hide
Query:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS
        PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN++ S+
Subjt:  PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGCAGGAGCAATTGAACTGCCCGAGATGCAAATCAAGCAACACCAAATTTTGCTACTACAATAACTACAGCCTTACTCAGCCGCGCTACTTTTGTAAATCTTGCCGCCG
GTATTGGACCGAGGGCGGCTCTCTCAGAAACATCCCCGTCGGCGGTGGCTCTCGGAAAAATAGGAAACCGTCGTCCGGTTCAGTT
mRNA sequenceShow/hide mRNA sequence
CCGCAGGAGCAATTGAACTGCCCGAGATGCAAATCAAGCAACACCAAATTTTGCTACTACAATAACTACAGCCTTACTCAGCCGCGCTACTTTTGTAAATCTTGCCGCCG
GTATTGGACCGAGGGCGGCTCTCTCAGAAACATCCCCGTCGGCGGTGGCTCTCGGAAAAATAGGAAACCGTCGTCCGGTTCAGTT
Protein sequenceShow/hide protein sequence
PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPSSGSV